RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 LYSTQ99698 3801 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 RBMY1BA6NDE4 496 aaKnown RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 RBMY1EA6NEQ0 496 aaKnown RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 TRBV12-3P01733 135 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 SLC25A5P05141 298 aaKnown RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 GPX1P07203 203 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 RBMY1DP0C7P1 496 aaKnown RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 PSG1P11464 419 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 SLAQ13239 276 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 KLF5Q13887 457 aaPredicted RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 USF2Q15853 346 aaPredicted RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 PRR27Q6MZM9 219 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 MRPL54Q6P161 138 aaKnown RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF600Q6ZNG1 722 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 ATP5L2Q7Z4Y8 100 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 BAGE3Q86Y29 109 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 DEFB125Q8N687 156 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 GPR82Q96P67 336 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 C20orf144Q9BQM9 153 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 Q9H3A6 140 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 HIGD1AQ9Y241 93 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 DNAH1Q9P2D7 4330 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 IGHV3-21A0A0B4J1V1 117 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 A0A1W2PS18 150 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 PGPA6NDG6 321 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 SPINK4O60575 86 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 IGLV2-11P01706 119 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 TCRAP04437 139 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 SNRPCP09234 159 aaKnown RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 CD7P09564 240 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 HIST1H1EP10412 219 aaKnown RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 LINC00322Q6ZN03 302 aaPredicted RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 Q75L30 129 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 MYOZ3Q8TDC0 251 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 DYNLRB2Q8TF09 96 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 SLC25A39Q9BZJ4 359 aaPredicted RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 OTORQ9NRC9 128 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF586Q9NXT0 402 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 H3BRN7 92 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 MRPS12O15235 138 aaKnown RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 IGLV1-51P01701 117 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 APCSP02743 223 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 SRIP30626 198 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 UBE2G1P62253 170 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 KIAA1644Q3SXP7 199 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 Q86TA4 180 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 OR9G4Q8NGQ1 327 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 C18orf32Q8TCD1 76 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 BLNKQ8WV28 456 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 SHANK2-AS3Q9BTD1 123 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 RPP21Q9H633 154 aaKnown RBP3.61□□□□□ -1.83
LINC00550-201ENST00000629293 RYR1P21817 5038 aa3.61□□□□□ -1.83
LINC00550-201ENST00000629293 FRAS1Q86XX4 4008 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF324O75467 553 aaPredicted RBP3.6□□□□□ -1.83
LINC00550-201ENST00000629293 IGLC2P0DOY2 106 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 LEMD1Q68G75 181 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 TOMM20LQ6UXN7 152 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 MRPL52Q86TS9 123 aaKnown RBP3.6□□□□□ -1.83
LINC00550-201ENST00000629293 NIT1Q86X76 327 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 C20orf173Q96LM9 149 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 GFRA4Q9GZZ7 299 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF331Q9NQX6 463 aaPredicted RBP3.6□□□□□ -1.83
LINC00550-201ENST00000629293 S4R3C0 116 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 A0A1B0GV90 55 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 HIGD1CA8MV81 97 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 LYZP61626 148 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 LCN12Q6JVE5 192 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 GTSF1Q8WW33 167 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 ALKBH7Q9BT30 221 aaPredicted RBP3.6□□□□□ -1.83
LINC00550-201ENST00000629293 SAMD10Q9BYL1 202 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 IGLV11-55A0A075B6I3 123 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 TRBV19A0A075B6N1 114 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 FAM231BA6NCW3 169 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 OR11H12B2RN74 326 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF253O75346 499 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 VPREB1P12018 145 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 RAB4AP20338 218 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 CTRLP40313 264 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 UBE2V1Q13404 147 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 PLECQ15149 4684 aaKnown RBP3.6□□□□□ -1.83
LINC00550-201ENST00000629293 TDRG1Q3Y452 100 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 SNHG12Q9BXW3 62 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 NRN1Q9NPD7 142 aa3.6□□□□□ -1.83
LINC00550-201ENST00000629293 IGHV3-35A0A0C4DH35 117 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 A0A0G2JLM5 398 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF705FA8MVS1 300 aaPredicted RBP3.59□□□□□ -1.83
LINC00550-201ENST00000629293 H3BTX0 84 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 IGHV3-23P01764 117 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 APOHP02749 345 aaPredicted RBP3.59□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF705DP0CH99 300 aaPredicted RBP3.59□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF705BP0CI00 300 aaPredicted RBP3.59□□□□□ -1.83
LINC00550-201ENST00000629293 AMTP48728 403 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 HBBP68871 147 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF562Q6V9R5 426 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 SIGLEC15Q6ZMC9 328 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 TMEM75Q8N9X5 138 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 OR4B1Q8NGF8 309 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 SGK494Q96LW2 274 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 C8orf49Q96NF6 230 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms