RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SDF2L1Q9HCN8 221 aa13.23□□□□□ -0.29
CIRBP-245ENST00000621399 TRAV10A0A0B4J240 114 aa13.22□□□□□ -0.29
CIRBP-245ENST00000621399 GNRH2O43555 120 aa13.22□□□□□ -0.29
CIRBP-245ENST00000621399 ZNF415Q09FC8 603 aa13.22□□□□□ -0.29
CIRBP-245ENST00000621399 DAZ2Q13117 558 aaKnown RBP13.22□□□□□ -0.29
CIRBP-245ENST00000621399 DERL1Q9BUN8 251 aa13.22□□□□□ -0.29
CIRBP-245ENST00000621399 MDFICQ9P1T7 246 aa13.22□□□□□ -0.29
CIRBP-245ENST00000621399 C11orf21Q9P2W6 132 aa13.22□□□□□ -0.29
CIRBP-245ENST00000621399 STARD9Q9P2P6 4700 aa13.22□□□□□ -0.29
CIRBP-245ENST00000621399 CRIP1P50238 77 aa13.21□□□□□ -0.29
CIRBP-245ENST00000621399 TCL1AP56279 114 aa13.21□□□□□ -0.29
CIRBP-245ENST00000621399 ZNF506Q5JVG8 444 aa13.21□□□□□ -0.29
CIRBP-245ENST00000621399 EIF5A2Q9GZV4 153 aaKnown RBP13.21□□□□□ -0.29
CIRBP-245ENST00000621399 KLK5Q9Y337 293 aaPredicted RBP13.21□□□□□ -0.29
CIRBP-245ENST00000621399 CSMD3Q7Z407 3707 aa13.21□□□□□ -0.29
CIRBP-245ENST00000621399 DEFB131BA0A096LNP1 70 aa13.2□□□□□ -0.3
CIRBP-245ENST00000621399 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
CIRBP-245ENST00000621399 FAM162BQ5T6X4 162 aa13.2□□□□□ -0.3
CIRBP-245ENST00000621399 IGHV3-16A0A0C4DH30 117 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 GAGE12BA1L429 117 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 RAB19A4D1S5 217 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 SH2D1AO60880 128 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 GAGE7O76087 117 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 TYMSP04818 313 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 GAGE12FP0CL80 117 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 GAGE12GP0CL81 117 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 GAGE12IP0CL82 117 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 HTN3P15516 51 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 CENPWQ5EE01 88 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 FAM210AQ96ND0 272 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 MLST8Q9BVC4 326 aa13.19□□□□□ -0.3
CIRBP-245ENST00000621399 TRGV1A0A0A0MS02 117 aa13.18□□□□□ -0.3
CIRBP-245ENST00000621399 ORM1P02763 201 aa13.18□□□□□ -0.3
CIRBP-245ENST00000621399 GNG4P50150 75 aa13.18□□□□□ -0.3
CIRBP-245ENST00000621399 ZNF674Q2M3X9 581 aa13.18□□□□□ -0.3
CIRBP-245ENST00000621399 Q6ZTI0 123 aa13.18□□□□□ -0.3
CIRBP-245ENST00000621399 TENM2Q9NT68 2774 aa13.17□□□□□ -0.3
CIRBP-245ENST00000621399 DYNC2H1Q8NCM8 4307 aaKnown RBP13.17□□□□□ -0.3
CIRBP-245ENST00000621399 IGKV3D-20A0A0C4DH25 116 aa13.17□□□□□ -0.3
CIRBP-245ENST00000621399 SPINK4O60575 86 aa13.17□□□□□ -0.3
CIRBP-245ENST00000621399 LINC00612Q8N6U2 182 aa13.17□□□□□ -0.3
CIRBP-245ENST00000621399 B4DEV8 164 aa13.16□□□□□ -0.3
CIRBP-245ENST00000621399 IGLL5B9A064 214 aa13.16□□□□□ -0.3
CIRBP-245ENST00000621399 TMEM250H0YL14 139 aa13.16□□□□□ -0.3
CIRBP-245ENST00000621399 ATP5G1P05496 136 aa13.16□□□□□ -0.3
CIRBP-245ENST00000621399 RAB14P61106 215 aa13.16□□□□□ -0.3
CIRBP-245ENST00000621399 PRR27Q6MZM9 219 aa13.16□□□□□ -0.3
CIRBP-245ENST00000621399 SPXQ9BT56 116 aa13.16□□□□□ -0.3
CIRBP-245ENST00000621399 MRPL16Q9NX20 251 aaKnown RBP13.16□□□□□ -0.3
CIRBP-245ENST00000621399 TRGV2A0A075B6R0 118 aa13.15□□□□□ -0.3
CIRBP-245ENST00000621399 M0R036 132 aa13.15□□□□□ -0.3
CIRBP-245ENST00000621399 MGST1P10620 155 aaKnown RBP13.15□□□□□ -0.3
CIRBP-245ENST00000621399 CEBPGP53567 150 aa13.15□□□□□ -0.3
CIRBP-245ENST00000621399 LGALS9BQ3B8N2 356 aa13.15□□□□□ -0.3
CIRBP-245ENST00000621399 KRBOX1C9JBD0 128 aa13.14□□□□□ -0.31
CIRBP-245ENST00000621399 SMIM12Q96EX1 92 aa13.14□□□□□ -0.31
CIRBP-245ENST00000621399 PLECQ15149 4684 aaKnown RBP13.13□□□□□ -0.31
CIRBP-245ENST00000621399 TRBV20OR9-2A0A075B6H5 130 aa13.13□□□□□ -0.31
CIRBP-245ENST00000621399 TMSB15BA0A087X1C1 80 aa13.13□□□□□ -0.31
CIRBP-245ENST00000621399 F5H768 121 aa13.13□□□□□ -0.31
CIRBP-245ENST00000621399 IGLV2-8P01709 118 aa13.13□□□□□ -0.31
CIRBP-245ENST00000621399 S100A4P26447 101 aaKnown RBP13.13□□□□□ -0.31
CIRBP-245ENST00000621399 ASIPP42127 132 aa13.13□□□□□ -0.31
CIRBP-245ENST00000621399 PARLQ9H300 379 aa13.13□□□□□ -0.31
CIRBP-245ENST00000621399 GRIFINA4D1Z8 144 aa13.12□□□□□ -0.31
CIRBP-245ENST00000621399 PGPEP1LA6NFU8 196 aa13.12□□□□□ -0.31
CIRBP-245ENST00000621399 M0R2P5 195 aa13.12□□□□□ -0.31
CIRBP-245ENST00000621399 NDUFS6O75380 124 aaKnown RBP13.12□□□□□ -0.31
CIRBP-245ENST00000621399 OR5I1Q13606 314 aa13.12□□□□□ -0.31
CIRBP-245ENST00000621399 LINC01559Q495D7 138 aa13.12□□□□□ -0.31
CIRBP-245ENST00000621399 IGHV4-4A0A075B6R2 117 aa13.11□□□□□ -0.31
CIRBP-245ENST00000621399 SRP19P09132 144 aaKnown RBP13.11□□□□□ -0.31
CIRBP-245ENST00000621399 RASL10AQ92737 203 aa13.11□□□□□ -0.31
CIRBP-245ENST00000621399 DAZAP1Q96EP5 407 aaKnown RBP13.11□□□□□ -0.31
CIRBP-245ENST00000621399 C18orf15Q96N68 181 aa13.11□□□□□ -0.31
CIRBP-245ENST00000621399 C9JCJ5 164 aa13.1□□□□□ -0.31
CIRBP-245ENST00000621399 RNASE3P12724 160 aaKnown RBP13.1□□□□□ -0.31
CIRBP-245ENST00000621399 TCTAP57738 103 aa13.1□□□□□ -0.31
CIRBP-245ENST00000621399 IFITM2Q01629 132 aa13.1□□□□□ -0.31
CIRBP-245ENST00000621399 PEA15Q15121 130 aa13.1□□□□□ -0.31
CIRBP-245ENST00000621399 FAM210BQ96KR6 192 aa13.1□□□□□ -0.31
CIRBP-245ENST00000621399 C9orf85Q96MD7 179 aa13.1□□□□□ -0.31
CIRBP-245ENST00000621399 BIN3Q9NQY0 253 aa13.1□□□□□ -0.31
CIRBP-245ENST00000621399 ZNF876PQ49A33 203 aa13.09□□□□□ -0.31
CIRBP-245ENST00000621399 TMEM88Q6PEY1 159 aa13.09□□□□□ -0.31
CIRBP-245ENST00000621399 NDUFAF3Q9BU61 184 aa13.09□□□□□ -0.31
CIRBP-245ENST00000621399 H3BVH4 76 aa13.08□□□□□ -0.32
CIRBP-245ENST00000621399 IGHV3-53P01767 116 aa13.08□□□□□ -0.32
CIRBP-245ENST00000621399 ARMS2P0C7Q2 107 aa13.08□□□□□ -0.32
CIRBP-245ENST00000621399 RPL19P84098 196 aaKnown RBP13.08□□□□□ -0.32
CIRBP-245ENST00000621399 SRSF3P84103 164 aaKnown RBP13.08□□□□□ -0.32
CIRBP-245ENST00000621399 DNLZQ5SXM8 178 aa13.08□□□□□ -0.32
CIRBP-245ENST00000621399 ZNF575Q86XF7 245 aa13.08□□□□□ -0.32
CIRBP-245ENST00000621399 OCC1Q8TAD7 63 aa13.08□□□□□ -0.32
CIRBP-245ENST00000621399 SMIM7Q9BQ49 75 aa13.08□□□□□ -0.32
CIRBP-245ENST00000621399 IL36BQ9NZH7 164 aa13.08□□□□□ -0.32
CIRBP-245ENST00000621399 APLNQ9ULZ1 77 aa13.08□□□□□ -0.32
CIRBP-245ENST00000621399 ZNF727A8MUV8 499 aa13.07□□□□□ -0.32
CIRBP-245ENST00000621399 HOXA5P20719 270 aa13.07□□□□□ -0.32
CIRBP-245ENST00000621399 CLLU1Q5K131 121 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms