RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 UNQ9165/PRO28630Q6UXU0 137 aa12.87□□□□□ -0.35
SEMA3B-213ENST00000618865 NUDT3O95989 172 aa12.87□□□□□ -0.35
SEMA3B-213ENST00000618865 GAGE5Q13069 117 aa12.87□□□□□ -0.35
SEMA3B-213ENST00000618865 GAGE6Q13070 117 aa12.87□□□□□ -0.35
SEMA3B-213ENST00000618865 SLC50A1Q9BRV3 221 aa12.87□□□□□ -0.35
SEMA3B-213ENST00000618865 IGKV3D-20A0A0C4DH25 116 aa12.86□□□□□ -0.35
SEMA3B-213ENST00000618865 RPL24P83731 157 aaKnown RBP12.86□□□□□ -0.35
SEMA3B-213ENST00000618865 RNF185Q96GF1 192 aa12.86□□□□□ -0.35
SEMA3B-213ENST00000618865 VPREB3Q9UKI3 123 aa12.86□□□□□ -0.35
SEMA3B-213ENST00000618865 GAGE12HA6NDE8 117 aa12.86□□□□□ -0.35
SEMA3B-213ENST00000618865 LCNL1Q6ZST4 164 aa12.86□□□□□ -0.35
SEMA3B-213ENST00000618865 TMEM191AQ9H0A3 160 aa12.86□□□□□ -0.35
SEMA3B-213ENST00000618865 ST20Q9HBF5 79 aa12.86□□□□□ -0.35
SEMA3B-213ENST00000618865 SMAD7O15105 426 aaKnown RBP12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 OR10AG1Q8NH19 301 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 NRGNQ92686 78 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 RBAKDNA6NC62 111 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 GAGE10A6NGK3 116 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 H3BUX3 64 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 CKS2P33552 79 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 LINC01545Q5VT33 79 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 C20orf173Q96LM9 149 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.85□□□□□ -0.358e-13■■■□□ 14.6
SEMA3B-213ENST00000618865 IGHV3-11P01762 117 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 BLCAPP62952 87 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 LINC01559Q495D7 138 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 KLK15Q9H2R5 256 aa12.85□□□□□ -0.35
SEMA3B-213ENST00000618865 DEFB1P60022 68 aa12.84□□□□□ -0.35
SEMA3B-213ENST00000618865 BVES-AS1Q5T3Y7 98 aa12.84□□□□□ -0.35
SEMA3B-213ENST00000618865 OR8A1Q8NGG7 326 aa12.84□□□□□ -0.35
SEMA3B-213ENST00000618865 ZANQ9Y493 2812 aa12.84□□□□□ -0.35
SEMA3B-213ENST00000618865 MYO18BQ8IUG5 2567 aa12.84□□□□□ -0.35
SEMA3B-213ENST00000618865 TRAV8-6A0A0B4J262 113 aa12.84□□□□□ -0.35
SEMA3B-213ENST00000618865 IGF1P05019 195 aa12.84□□□□□ -0.35
SEMA3B-213ENST00000618865 SRSF2Q01130 221 aaKnown RBP12.84□□□□□ -0.35
SEMA3B-213ENST00000618865 FOXE3Q13461 319 aa12.84□□□□□ -0.35
SEMA3B-213ENST00000618865 CSPG4Q6UVK1 2322 aa12.83□□□□□ -0.35
SEMA3B-213ENST00000618865 AVPP01185 164 aa12.83□□□□□ -0.36
SEMA3B-213ENST00000618865 CRIP2P52943 208 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-213ENST00000618865 SLC25A34Q6PIV7 304 aa12.83□□□□□ -0.36
SEMA3B-213ENST00000618865 FAM223BA6NKX1 122 aa12.83□□□□□ -0.36
SEMA3B-213ENST00000618865 GATA1P15976 413 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-213ENST00000618865 PRR9Q5T870 116 aa12.83□□□□□ -0.36
SEMA3B-213ENST00000618865 GPHB5Q86YW7 130 aa12.83□□□□□ -0.36
SEMA3B-213ENST00000618865 FAM223AQ8IWN6 122 aa12.83□□□□□ -0.36
SEMA3B-213ENST00000618865 CNFNQ9BYD5 112 aa12.83□□□□□ -0.36
SEMA3B-213ENST00000618865 DEFB125Q8N687 156 aa12.82□□□□□ -0.36
SEMA3B-213ENST00000618865 SCRT2Q9NQ03 307 aa12.82□□□□□ -0.36
SEMA3B-213ENST00000618865 FBN2P35556 2912 aa12.82□□□□□ -0.36
SEMA3B-213ENST00000618865 TMEM78Q5T7P6 136 aa12.82□□□□□ -0.36
SEMA3B-213ENST00000618865 CD300EQ496F6 205 aaPredicted RBP12.82□□□□□ -0.36
SEMA3B-213ENST00000618865 C16orf92Q96LL3 132 aa12.82□□□□□ -0.36
SEMA3B-213ENST00000618865 CENPEQ02224 2701 aa12.81□□□□□ -0.36
SEMA3B-213ENST00000618865 A6NDX4 124 aa12.81□□□□□ -0.36
SEMA3B-213ENST00000618865 EVI2AP22794 236 aa12.81□□□□□ -0.36
SEMA3B-213ENST00000618865 WFDC3Q8IUB2 231 aa12.81□□□□□ -0.36
SEMA3B-213ENST00000618865 ACACBO00763 2458 aa12.81□□□□□ -0.36
SEMA3B-213ENST00000618865 C12orf54Q6X4T0 127 aa12.81□□□□□ -0.36
SEMA3B-213ENST00000618865 C9orf47Q6ZRZ4 202 aa12.8□□□□□ -0.36
SEMA3B-213ENST00000618865 RAX2Q96IS3 184 aa12.8□□□□□ -0.36
SEMA3B-213ENST00000618865 IGHV7-4-1A0A0J9YVY3 117 aa12.79□□□□□ -0.36
SEMA3B-213ENST00000618865 IGHG2P01859 326 aa12.79□□□□□ -0.36
SEMA3B-213ENST00000618865 MSMBP08118 114 aa12.79□□□□□ -0.36
SEMA3B-213ENST00000618865 NEGR1Q7Z3B1 354 aa12.79□□□□□ -0.36
SEMA3B-213ENST00000618865 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
SEMA3B-213ENST00000618865 ZFYVE26Q68DK2 2539 aa12.79□□□□□ -0.36
SEMA3B-213ENST00000618865 POLQO75417 2590 aa12.79□□□□□ -0.36
SEMA3B-213ENST00000618865 TCTAP57738 103 aa12.79□□□□□ -0.36
SEMA3B-213ENST00000618865 EDN2P20800 178 aa12.78□□□□□ -0.36
SEMA3B-213ENST00000618865 HIST1H1AQ02539 215 aaPredicted RBP12.78□□□□□ -0.36
SEMA3B-213ENST00000618865 PTH2Q96A98 100 aa12.78□□□□□ -0.36
SEMA3B-213ENST00000618865 MRPL53Q96EL3 112 aaKnown RBP12.78□□□□□ -0.36
SEMA3B-213ENST00000618865 CSDC2Q9Y534 153 aaKnown RBP12.78□□□□□ -0.36
SEMA3B-213ENST00000618865 SPRY2O43597 315 aa12.78□□□□□ -0.36
SEMA3B-213ENST00000618865 HBDP02042 147 aa12.78□□□□□ -0.36
SEMA3B-213ENST00000618865 IGKV3-7A0A075B6H7 116 aa12.78□□□□□ -0.36
SEMA3B-213ENST00000618865 CACNG7P62955 275 aa12.78□□□□□ -0.36
SEMA3B-213ENST00000618865 TEX48A0A1B0GUV7 120 aa12.77□□□□□ -0.36
SEMA3B-213ENST00000618865 TNFRSF6BO95407 300 aa12.77□□□□□ -0.36
SEMA3B-213ENST00000618865 ERG28Q9UKR5 140 aa12.77□□□□□ -0.37
SEMA3B-213ENST00000618865 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 NDUFA4O00483 81 aa12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 SOCS3O14543 225 aa12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 SRSF1Q07955 248 aaKnown RBP eCLIP12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 OR4X2Q8NGF9 303 aa12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 USP9YO00507 2555 aaPredicted RBP12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 F6UB75 175 aa12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 CD5LO43866 347 aa12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 MRPL23Q16540 153 aaKnown RBP12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 C18orf15Q96N68 181 aa12.76□□□□□ -0.37
SEMA3B-213ENST00000618865 MS4A6AQ9H2W1 248 aa12.75□□□□□ -0.37
SEMA3B-213ENST00000618865 ANKRD17O75179 2603 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-213ENST00000618865 C9orf139Q6ZV77 190 aa12.75□□□□□ -0.37
SEMA3B-213ENST00000618865 MAP1LC3AQ9H492 121 aa12.75□□□□□ -0.37
SEMA3B-213ENST00000618865 KIR3DS1Q14943 382 aa12.75□□□□□ -0.37
SEMA3B-213ENST00000618865 IFI27L1Q96BM0 104 aa12.75□□□□□ -0.37
SEMA3B-213ENST00000618865 ANAPC13Q9BS18 74 aa12.75□□□□□ -0.37
SEMA3B-213ENST00000618865 H3BVH4 76 aa12.74□□□□□ -0.37
SEMA3B-213ENST00000618865 RPL11P62913 178 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms