RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 GNRH2O43555 120 aa17.36■□□□□ 0.37
VEGFA-228ENST00000617771 SUMO1P63165 101 aaKnown RBP17.36■□□□□ 0.37
VEGFA-228ENST00000617771 ZNF479Q96JC4 524 aa17.36■□□□□ 0.37
VEGFA-228ENST00000617771 KRTAP1-5Q9BYS1 174 aa17.36■□□□□ 0.37
VEGFA-228ENST00000617771 M0R2P5 195 aa17.35■□□□□ 0.37
VEGFA-228ENST00000617771 TYMSP04818 313 aa17.35■□□□□ 0.37
VEGFA-228ENST00000617771 SFTA3P0C7M3 94 aa17.35■□□□□ 0.37
VEGFA-228ENST00000617771 BTF3P20290 206 aaKnown RBP17.35■□□□□ 0.37
VEGFA-228ENST00000617771 EPDR1Q9UM22 224 aa17.35■□□□□ 0.37
VEGFA-228ENST00000617771 PSG8Q9UQ74 426 aa17.35■□□□□ 0.37
VEGFA-228ENST00000617771 DNAH11Q96DT5 4516 aa17.34■□□□□ 0.37
VEGFA-228ENST00000617771 TRAV4A0A0B4J268 109 aa17.34■□□□□ 0.37
VEGFA-228ENST00000617771 GGTLC3B5MD39 225 aa17.34■□□□□ 0.37
VEGFA-228ENST00000617771 CTXND1A0A1B0GTU2 59 aa17.33■□□□□ 0.36
VEGFA-228ENST00000617771 A0A1W2PRE2 83 aa17.33■□□□□ 0.36
VEGFA-228ENST00000617771 FBLL1A6NHQ2 334 aaKnown RBP17.33■□□□□ 0.36
VEGFA-228ENST00000617771 SIVA1O15304 175 aa17.33■□□□□ 0.36
VEGFA-228ENST00000617771 FLI1Q01543 452 aaPredicted RBP17.33■□□□□ 0.36
VEGFA-228ENST00000617771 ZFP69Q49AA0 526 aa17.33■□□□□ 0.36
VEGFA-228ENST00000617771 NEGR1Q7Z3B1 354 aa17.33■□□□□ 0.36
VEGFA-228ENST00000617771 ZNF575Q86XF7 245 aa17.33■□□□□ 0.36
VEGFA-228ENST00000617771 CYB561D1Q8N8Q1 229 aa17.33■□□□□ 0.36
VEGFA-228ENST00000617771 PCNPQ8WW12 178 aaKnown RBP17.33■□□□□ 0.36
VEGFA-228ENST00000617771 DYNC1H1Q14204 4646 aaKnown RBP17.33■□□□□ 0.36
VEGFA-228ENST00000617771 TAAR5O14804 337 aa17.32■□□□□ 0.36
VEGFA-228ENST00000617771 TMEM75Q8N9X5 138 aa17.32■□□□□ 0.36
VEGFA-228ENST00000617771 OR4C5Q8NGB2 326 aa17.32■□□□□ 0.36
VEGFA-228ENST00000617771 KIAA1109Q2LD37 5005 aa17.31■□□□□ 0.36
VEGFA-228ENST00000617771 NXPH4O95158 308 aa17.31■□□□□ 0.36
VEGFA-228ENST00000617771 ORM1P02763 201 aa17.31■□□□□ 0.36
VEGFA-228ENST00000617771 SMUG1Q53HV7 270 aa17.31■□□□□ 0.36
VEGFA-228ENST00000617771 AKR1C8PQ5T2L2 129 aa17.31■□□□□ 0.36
VEGFA-228ENST00000617771 PRNTQ86SH4 94 aa17.31■□□□□ 0.36
VEGFA-228ENST00000617771 G3V3Q6 166 aa17.3■□□□□ 0.36
VEGFA-228ENST00000617771 K7EQD1 137 aa17.3■□□□□ 0.36
VEGFA-228ENST00000617771 GCGP01275 180 aa17.3■□□□□ 0.36
VEGFA-228ENST00000617771 IGLV2-11P01706 119 aa17.3■□□□□ 0.36
VEGFA-228ENST00000617771 SRIP30626 198 aa17.3■□□□□ 0.36
VEGFA-228ENST00000617771 ZNF726P1Q15940 193 aa17.3■□□□□ 0.36
VEGFA-228ENST00000617771 LYPD5Q6UWN5 251 aa17.3■□□□□ 0.36
VEGFA-228ENST00000617771 ARPC5O15511 151 aa17.29■□□□□ 0.36
VEGFA-228ENST00000617771 PFN1P07737 140 aaKnown RBP17.29■□□□□ 0.36
VEGFA-228ENST00000617771 GYPEP15421 78 aa17.29■□□□□ 0.36
VEGFA-228ENST00000617771 ZNF80P51504 273 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-228ENST00000617771 SAPCD1Q5SSQ6 148 aa17.29■□□□□ 0.36
VEGFA-228ENST00000617771 C9JCJ5 164 aa17.28■□□□□ 0.36
VEGFA-228ENST00000617771 C16orf90A8MZG2 172 aa17.27■□□□□ 0.36
VEGFA-228ENST00000617771 IFNA7P01567 189 aa17.27■□□□□ 0.36
VEGFA-228ENST00000617771 TXNDC17Q9BRA2 123 aa17.27■□□□□ 0.36
VEGFA-228ENST00000617771 NKX6-2Q9C056 277 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-228ENST00000617771 PPT1P50897 306 aa17.26■□□□□ 0.35
VEGFA-228ENST00000617771 UBE2G2P60604 165 aa17.26■□□□□ 0.35
VEGFA-228ENST00000617771 C11orf21Q9P2W6 132 aa17.26■□□□□ 0.35
VEGFA-228ENST00000617771 LINC00315P59091 139 aa17.25■□□□□ 0.35
VEGFA-228ENST00000617771 ZNF876PQ49A33 203 aa17.25■□□□□ 0.35
VEGFA-228ENST00000617771 FGF8P55075 233 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-228ENST00000617771 LINC00479Q96M42 142 aa17.24■□□□□ 0.35
VEGFA-228ENST00000617771 CYTL1Q9NRR1 136 aa17.24■□□□□ 0.35
VEGFA-228ENST00000617771 TRAV34A0A0B4J273 112 aa17.23■□□□□ 0.35
VEGFA-228ENST00000617771 PEX7O00628 323 aa17.23■□□□□ 0.35
VEGFA-228ENST00000617771 CIDEAO60543 219 aa17.23■□□□□ 0.35
VEGFA-228ENST00000617771 SH2D6Q7Z4S9 175 aa17.23■□□□□ 0.35
VEGFA-228ENST00000617771 ARL2-SNX15V9GYD0 113 aa17.23■□□□□ 0.35
VEGFA-228ENST00000617771 TRAV9-2A0A087WT02 112 aa17.22■□□□□ 0.35
VEGFA-228ENST00000617771 MAP1LC3B2A6NCE7 125 aa17.22■□□□□ 0.35
VEGFA-228ENST00000617771 FAM74A7A6NL05 159 aa17.22■□□□□ 0.35
VEGFA-228ENST00000617771 GATA1P15976 413 aaPredicted RBP17.22■□□□□ 0.35
VEGFA-228ENST00000617771 HIST1H2BAQ96A08 127 aa17.22■□□□□ 0.35
VEGFA-228ENST00000617771 C9orf85Q96MD7 179 aa17.22■□□□□ 0.35
VEGFA-228ENST00000617771 MAP1LC3BQ9GZQ8 125 aa17.22■□□□□ 0.35
VEGFA-228ENST00000617771 SMLR1H3BR10 107 aa17.21■□□□□ 0.35
VEGFA-228ENST00000617771 LY96Q9Y6Y9 160 aa17.21■□□□□ 0.35
VEGFA-228ENST00000617771 SPATA12Q7Z6I5 190 aa17.2■□□□□ 0.34
VEGFA-228ENST00000617771 STOML3Q8TAV4 291 aa17.2■□□□□ 0.34
VEGFA-228ENST00000617771 PTH2Q96A98 100 aa17.2■□□□□ 0.34
VEGFA-228ENST00000617771 RS1O15537 224 aa17.19■□□□□ 0.34
VEGFA-228ENST00000617771 ZNF345Q14585 488 aa17.19■□□□□ 0.34
VEGFA-228ENST00000617771 CFAP126Q5VTH2 177 aa17.19■□□□□ 0.34
VEGFA-228ENST00000617771 Q86TA4 180 aa17.19■□□□□ 0.34
VEGFA-228ENST00000617771 KCNRGQ8N5I3 272 aa17.19■□□□□ 0.34
VEGFA-228ENST00000617771 NHLRC2Q8NBF2 726 aa17.19■□□□□ 0.34
VEGFA-228ENST00000617771 LOC100131303A0A0U1RQF7 123 aa17.18■□□□□ 0.34
VEGFA-228ENST00000617771 FABP5P3A8MUU1 101 aa17.18■□□□□ 0.34
VEGFA-228ENST00000617771 K7EP13 123 aa17.18■□□□□ 0.34
VEGFA-228ENST00000617771 RNASE3P12724 160 aaKnown RBP17.18■□□□□ 0.34
VEGFA-228ENST00000617771 EVI2AP22794 236 aa17.17■□□□□ 0.34
VEGFA-228ENST00000617771 S100A4P26447 101 aaKnown RBP17.17■□□□□ 0.34
VEGFA-228ENST00000617771 ZNF506Q5JVG8 444 aa17.17■□□□□ 0.34
VEGFA-228ENST00000617771 DPPA3Q6W0C5 159 aa17.17■□□□□ 0.34
VEGFA-228ENST00000617771 Q6ZRN7 208 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-228ENST00000617771 NFE4Q86UQ8 179 aa17.17■□□□□ 0.34
VEGFA-228ENST00000617771 WFDC10BQ8IUB3 73 aa17.17■□□□□ 0.34
VEGFA-228ENST00000617771 PRADC1Q9BSG0 188 aa17.17■□□□□ 0.34
VEGFA-228ENST00000617771 KRTAP17-1Q9BYP8 105 aa17.17■□□□□ 0.34
VEGFA-228ENST00000617771 PGPEP1LA6NFU8 196 aa17.16■□□□□ 0.34
VEGFA-228ENST00000617771 RHOHQ15669 191 aa17.16■□□□□ 0.34
VEGFA-228ENST00000617771 SLC25A29Q8N8R3 303 aa17.16■□□□□ 0.34
VEGFA-228ENST00000617771 TCEAL7Q9BRU2 100 aa17.16■□□□□ 0.34
VEGFA-228ENST00000617771 IGKV3D-20A0A0C4DH25 116 aa17.15■□□□□ 0.34
VEGFA-228ENST00000617771 TRBV6-4A0A1B0GX49 114 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms