RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 TMEM167BQ9NRX6 74 aa6.64□□□□□ -1.35
TARDBP-218ENST00000617172 NAGKQ9UJ70 344 aa6.64□□□□□ -1.35
TARDBP-218ENST00000617172 RPH3ALQ9UNE2 315 aa6.64□□□□□ -1.35
TARDBP-218ENST00000617172 TNFSF18Q9UNG2 199 aa6.64□□□□□ -1.35
TARDBP-218ENST00000617172 PKHD1P08F94 4074 aa6.64□□□□□ -1.35
TARDBP-218ENST00000617172 KIAA1109Q2LD37 5005 aa6.64□□□□□ -1.35
TARDBP-218ENST00000617172 IGHV3-16A0A0C4DH30 117 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 K7EQD1 137 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 TAAR5O14804 337 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 HMGB3O15347 200 aaKnown RBP6.63□□□□□ -1.35
TARDBP-218ENST00000617172 GNRH2O43555 120 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 EIF3GO75821 320 aaKnown RBP eCLIP6.63□□□□□ -1.35
TARDBP-218ENST00000617172 CXorf1O96002 111 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 GIPP09681 153 aaPredicted RBP6.63□□□□□ -1.35
TARDBP-218ENST00000617172 SFTA3P0C7M3 94 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 ATP6V0CP27449 155 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 GCHFRP30047 84 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 LINC00315P59091 139 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 SPATA12Q7Z6I5 190 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 NFE4Q86UQ8 179 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 OR4C5Q8NGB2 326 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 TVP23CQ96ET8 276 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 ZNF479Q96JC4 524 aa6.63□□□□□ -1.35
TARDBP-218ENST00000617172 ACTR3CQ9C0K3 210 aaPredicted RBP6.63□□□□□ -1.35
TARDBP-218ENST00000617172 MUC4Q99102 2169 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 TRAV8-1A0A0A6YYK1 113 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 BORCS7-ASMTA0A0B4J1R7 106 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 EREGO14944 169 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 TCRAP04437 139 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 GYPEP15421 78 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 SUMO1P63165 101 aaKnown RBP6.62□□□□□ -1.35
TARDBP-218ENST00000617172 ZFP69Q49AA0 526 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 SAPCD1Q5SSQ6 148 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 PGPEP1Q9NXJ5 209 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 EPDR1Q9UM22 224 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 LY96Q9Y6Y9 160 aa6.62□□□□□ -1.35
TARDBP-218ENST00000617172 A0A1W2PRE2 83 aa6.61□□□□□ -1.35
TARDBP-218ENST00000617172 F6UZH7 168 aa6.61□□□□□ -1.35
TARDBP-218ENST00000617172 TYMSP04818 313 aa6.61□□□□□ -1.35
TARDBP-218ENST00000617172 PFN1P07737 140 aaKnown RBP6.61□□□□□ -1.35
TARDBP-218ENST00000617172 EVI2AP22794 236 aa6.61□□□□□ -1.35
TARDBP-218ENST00000617172 GNG5P63218 68 aa6.61□□□□□ -1.35
TARDBP-218ENST00000617172 NKX6-2Q9C056 277 aaPredicted RBP6.61□□□□□ -1.35
TARDBP-218ENST00000617172 PSG8Q9UQ74 426 aa6.61□□□□□ -1.35
TARDBP-218ENST00000617172 DNAH17Q9UFH2 4485 aa6.61□□□□□ -1.35
TARDBP-218ENST00000617172 GCGP01275 180 aa6.6□□□□□ -1.35
TARDBP-218ENST00000617172 TIRAPP58753 221 aa6.6□□□□□ -1.35
TARDBP-218ENST00000617172 FLI1Q01543 452 aaPredicted RBP6.6□□□□□ -1.35
TARDBP-218ENST00000617172 ZNF876PQ49A33 203 aa6.6□□□□□ -1.35
TARDBP-218ENST00000617172 SMUG1Q53HV7 270 aa6.6□□□□□ -1.35
TARDBP-218ENST00000617172 Q6ZRN7 208 aaPredicted RBP6.6□□□□□ -1.35
TARDBP-218ENST00000617172 C10orf126Q8N4M7 172 aa6.6□□□□□ -1.35
TARDBP-218ENST00000617172 CYB561D1Q8N8Q1 229 aa6.6□□□□□ -1.35
TARDBP-218ENST00000617172 TMEM75Q8N9X5 138 aa6.6□□□□□ -1.35
TARDBP-218ENST00000617172 PTH2Q96A98 100 aa6.6□□□□□ -1.35
TARDBP-218ENST00000617172 SGK494Q96LW2 274 aa6.6□□□□□ -1.35
TARDBP-218ENST00000617172 PKD1P98161 4303 aa6.6□□□□□ -1.35
TARDBP-218ENST00000617172 FXYD6-FXYD2A0A087WZ82 144 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 IGLV2-11P01706 119 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 DNAH10OSP0CZ25 163 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 GATA1P15976 413 aaPredicted RBP6.59□□□□□ -1.35
TARDBP-218ENST00000617172 PPT1P50897 306 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 KRTAP10-2P60368 255 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 ERVFC1-1P60608 527 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 Q5BKY6 102 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 PRNTQ86SH4 94 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 OR2T35Q8NGX2 323 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 PRADC1Q9BSG0 188 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 SH3BGRL3Q9H299 93 aa6.59□□□□□ -1.35
TARDBP-218ENST00000617172 CTXND1A0A1B0GTU2 59 aa6.58□□□□□ -1.36
TARDBP-218ENST00000617172 TRBV6-4A0A1B0GX49 114 aa6.58□□□□□ -1.36
TARDBP-218ENST00000617172 RNF222A6NCQ9 220 aa6.58□□□□□ -1.36
TARDBP-218ENST00000617172 GGTLC3B5MD39 225 aa6.58□□□□□ -1.36
TARDBP-218ENST00000617172 IFNA7P01567 189 aa6.58□□□□□ -1.36
TARDBP-218ENST00000617172 ZNF80P51504 273 aaPredicted RBP6.58□□□□□ -1.36
TARDBP-218ENST00000617172 PIK3CD-AS1Q5SR53 167 aa6.58□□□□□ -1.36
TARDBP-218ENST00000617172 RPL7L1Q6DKI1 246 aaKnown RBP6.58□□□□□ -1.36
TARDBP-218ENST00000617172 MAPKAPK5-AS1Q8N8E1 139 aa6.58□□□□□ -1.36
TARDBP-218ENST00000617172 NHLRC2Q8NBF2 726 aa6.58□□□□□ -1.36
TARDBP-218ENST00000617172 MSRB1Q9NZV6 116 aa6.58□□□□□ -1.36
TARDBP-218ENST00000617172 IGHV3-38A0A0C4DH36 116 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 FABP5P3A8MUU1 101 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 RS1O15537 224 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 CRYGDP07320 174 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 MGST1P10620 155 aaKnown RBP6.57□□□□□ -1.36
TARDBP-218ENST00000617172 RHOHQ15669 191 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 AKR1C8PQ5T2L2 129 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 CFAP126Q5VTH2 177 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 WFDC10BQ8IUB3 73 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 SLC25A29Q8N8R3 303 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 HIST1H2BAQ96A08 127 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 C9orf85Q96MD7 179 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 C11orf21Q9P2W6 132 aa6.57□□□□□ -1.36
TARDBP-218ENST00000617172 TRAV8-6A0A0B4J262 113 aa6.56□□□□□ -1.36
TARDBP-218ENST00000617172 S100A4P26447 101 aaKnown RBP6.56□□□□□ -1.36
TARDBP-218ENST00000617172 RGS21Q2M5E4 152 aa6.56□□□□□ -1.36
TARDBP-218ENST00000617172 ZFP2Q6ZN57 461 aa6.56□□□□□ -1.36
TARDBP-218ENST00000617172 Q8N1X5 172 aa6.56□□□□□ -1.36
TARDBP-218ENST00000617172 TCEAL7Q9BRU2 100 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms