RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 CCDC140Q96MF4 163 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 KLK9Q9UKQ9 250 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 HIVEP2P31629 2446 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 IGHG2P01859 326 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 C16orf54Q6UWD8 224 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 UNQ9165/PRO28630Q6UXU0 137 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 LINC00173Q6ZV60 143 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 ELANEP08246 267 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 DEFB1P60022 68 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 GATA1P15976 413 aaPredicted RBP10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 EMP1P54849 157 aa10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 CD300EQ496F6 205 aaPredicted RBP10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 ZNF876PQ49A33 203 aa10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 MRPL53Q96EL3 112 aaKnown RBP10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 VCX2Q9H322 139 aa10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 UBE2L6O14933 153 aa10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 SAP30O75446 220 aa10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 LINC01559Q495D7 138 aa10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 GDF5OSQ5U4N7 250 aa10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 GNRH2O43555 120 aa10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 MBD6Q96DN6 1003 aa10.18□□□□□ -0.78
PPP4R3B-206ENST00000616407 H3BUT2 72 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 VCYO14598 125 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 MYCNOSP40205 109 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 SUMO2P61956 95 aaKnown RBP10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 DEFB113Q30KQ7 82 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 Q8N8P6 123 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 ORAOV1Q8WV07 137 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 IGKV3OR2-268A0A0C4DH90 116 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 MRAP2Q96G30 205 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 UBE2E2Q96LR5 201 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 PKD1L2Q7Z442 2459 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 TRGV2A0A075B6R0 118 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 PAX2Q02962 417 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 ARL6IP6Q8N6S5 226 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 NHP2Q9NX24 153 aaKnown RBP10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 C2CD3Q4AC94 2353 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 LINC01619G3V211 115 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 DEFB136Q30KP8 78 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 ZNF747Q9BV97 191 aa10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 MRPS16Q9Y3D3 137 aaKnown RBP10.17□□□□□ -0.78
PPP4R3B-206ENST00000616407 K7ERU9 68 aa10.16□□□□□ -0.78
PPP4R3B-206ENST00000616407 KIR2DL5BA0A0G2JN68 375 aa10.16□□□□□ -0.78
PPP4R3B-206ENST00000616407 KIR2DL5BA0A0G2JPC4 375 aa10.16□□□□□ -0.78
PPP4R3B-206ENST00000616407 KIR2DL5AQ8N109 375 aa10.16□□□□□ -0.78
PPP4R3B-206ENST00000616407 OR9G4Q8NGQ1 327 aa10.16□□□□□ -0.78
PPP4R3B-206ENST00000616407 LENEPQ9Y5L5 61 aa10.16□□□□□ -0.78
PPP4R3B-206ENST00000616407 TRBV6-1A0A0K0K1D8 114 aa10.16□□□□□ -0.78
PPP4R3B-206ENST00000616407 A6NDX4 124 aa10.16□□□□□ -0.78
PPP4R3B-206ENST00000616407 HOXD3P31249 432 aaPredicted RBP10.16□□□□□ -0.78
PPP4R3B-206ENST00000616407 SMAGPQ0VAQ4 97 aa10.16□□□□□ -0.78
PPP4R3B-206ENST00000616407 A0A1B0GXF2 115 aa10.15□□□□□ -0.78
PPP4R3B-206ENST00000616407 ESDP10768 282 aa10.15□□□□□ -0.78
PPP4R3B-206ENST00000616407 CDKN1BP46527 198 aa10.15□□□□□ -0.78
PPP4R3B-206ENST00000616407 POLQO75417 2590 aa10.15□□□□□ -0.78
PPP4R3B-206ENST00000616407 KNCNA6PVL3 124 aa10.15□□□□□ -0.78
PPP4R3B-206ENST00000616407 ZNF80P51504 273 aaPredicted RBP10.15□□□□□ -0.78
PPP4R3B-206ENST00000616407 Q8N6K4 173 aa10.15□□□□□ -0.78
PPP4R3B-206ENST00000616407 NAA38Q9BRA0 125 aaKnown RBP10.15□□□□□ -0.78
PPP4R3B-206ENST00000616407 HSD52Q0P140 79 aa10.15□□□□□ -0.78
PPP4R3B-206ENST00000616407 EYSQ5T1H1 3165 aa10.15□□□□□ -0.79
PPP4R3B-206ENST00000616407 REV3LO60673 3130 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 NEGR1Q7Z3B1 354 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 ZNF462Q96JM2 2506 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 MGAQ8IWI9 3026 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 IGHV1OR15-1A0A075B7D0 117 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 DLEU1O43261 78 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 C19orf54Q5BKX5 351 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 ZNF815PA8K554 130 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 APOMO95445 188 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 C21orf62-AS1Q17RA5 79 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 C2orf66Q6UXQ4 117 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 MEGF9Q9H1U4 602 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 SEC11AP67812 179 aa10.14□□□□□ -0.79
PPP4R3B-206ENST00000616407 LGALS1P09382 135 aaKnown RBP10.13□□□□□ -0.79
PPP4R3B-206ENST00000616407 ZNF415Q09FC8 603 aa10.13□□□□□ -0.79
PPP4R3B-206ENST00000616407 MRPL52Q86TS9 123 aaKnown RBP10.13□□□□□ -0.79
PPP4R3B-206ENST00000616407 XCL2Q9UBD3 114 aa10.13□□□□□ -0.79
PPP4R3B-206ENST00000616407 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
PPP4R3B-206ENST00000616407 TP53TG3Q9ULZ0 132 aa10.13□□□□□ -0.79
PPP4R3B-206ENST00000616407 CD28P10747 220 aa10.13□□□□□ -0.79
PPP4R3B-206ENST00000616407 PLNP26678 52 aa10.13□□□□□ -0.79
PPP4R3B-206ENST00000616407 TET2Q6N021 2002 aaPredicted RBP10.13□□□□□ -0.79
PPP4R3B-206ENST00000616407 J3QKU1 62 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 LGALS9BQ3B8N2 356 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 LGALS9CQ6DKI2 356 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 SPCS1Q9Y6A9 102 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 IGHV3-64A0A075B6Q5 118 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 TRGV1A0A0A0MS02 117 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 C9orf47Q6ZRZ4 202 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 LURAP1LQ8IV03 231 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 ATP6V0BQ99437 205 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 MRPL16Q9NX20 251 aaKnown RBP10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 ABCA12Q86UK0 2595 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 COTL1Q14019 142 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 DKK2Q9UBU2 259 aa10.12□□□□□ -0.79
PPP4R3B-206ENST00000616407 LINC01549A6NIU2 74 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 INSP01308 110 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 IGHV3-53P01767 116 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 RPL35AP18077 110 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms