RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TRBV20-1A0A075B6N2 111 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 PITX3O75364 302 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 TRACP01848 142 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 RBP4P02753 201 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 CD2P06729 351 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 SAA1P0DJI8 122 aaPredicted RBP1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 CCL4P13236 92 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 GNG4P50150 75 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 RPL26P61254 145 aaKnown RBP1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 PPP3R1P63098 170 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 CDK6Q00534 326 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 ZNF846Q147U1 533 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 NUMA1Q14980 2115 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 DEFB113Q30KQ7 82 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 SPANXN5Q5MJ07 72 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 C3orf62Q6ZUJ4 267 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 Q6ZUT4 128 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 OR5AS1Q8N127 324 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 DEFB119Q8N690 84 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 C9orf163Q8N9P6 203 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 OR5AK2Q8NH90 309 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 SEC11CQ9BY50 192 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 C14orf132Q9NPU4 83 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 RPL26L1Q9UNX3 145 aaKnown RBP1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 ABCA8O94911 1581 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 NWD1Q149M9 1564 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 KIF14Q15058 1648 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 BIVM-ERCC5R4GMW8 1640 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 ALPK3Q96L96 1907 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 SPHKAPQ2M3C7 1700 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 NAIPQ13075 1403 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 BCL9LQ86UU0 1499 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 SHANK2Q9UPX8 1470 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 CDK13Q14004 1512 aaKnown RBP1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 LRRC7Q96NW7 1537 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 UGGT2Q9NYU1 1516 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 PLXNA4Q9HCM2 1894 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 DIDO1Q9BTC0 2240 aaKnown RBP1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 EML5Q05BV3 1969 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 IGHV1-24A0A0C4DH33 117 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 C3orf85A0A1B0GTC6 90 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 A6NN06 94 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 ZNF705FA8MVS1 300 aaPredicted RBP1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 H3BRN7 92 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 CCL25O15444 150 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 PROSCO94903 275 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 UBL3O95164 117 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 NCMAPQ5T1S8 102 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 TEX261Q6UWH6 196 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 CLECL1Q8IZS7 167 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 ATOH7Q8N100 152 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 FAM19A2Q8N3H0 131 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 Q9BRP9 147 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 ZFP30Q9Y2G7 519 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 MPC1Q9Y5U8 109 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 LHFPL6Q9Y693 200 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 SHPRHQ149N8 1683 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 USP54Q70EL1 1684 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 MDC1Q14676 2089 aaKnown RBP1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 SUPT6HQ7KZ85 1726 aaKnown RBP1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 AKAP12Q02952 1782 aa1.31□□□□□ -2.2
SCAMP1-205ENST00000614488 ABCC3O15438 1527 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 SLIT2O94813 1529 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 ZFYVE16Q7Z3T8 1539 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 DISP1Q96F81 1524 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 KDM5DQ9BY66 1539 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 GLI3P10071 1580 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 SETBP1Q9Y6X0 1596 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 MYO3AQ8NEV4 1616 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 RP1P56715 2156 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 COL24A1Q17RW2 1714 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 LAMB2P55268 1798 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 TRAV12-2A0A075B6T6 113 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 A0A0G2JQZ4 141 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 TMEM218A2RU14 115 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 ZNF736B4DX44 427 aaPredicted RBP1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 BAALC-AS2P0C853 105 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 MIFP14174 115 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 ETV6P41212 452 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 TPPP2P59282 170 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 CATR1Q13166 79 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 GTF2H5Q6ZYL4 71 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 Q8N2B8 174 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 TMEM254Q8TBM7 123 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 MUCL1Q96DR8 90 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 MRPL57Q9BQC6 102 aaKnown RBP1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 SNRNP25Q9BV90 132 aaKnown RBP1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 TIMM21Q9BVV7 248 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 AGPAT4-IT1Q9H0P7 198 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 SAR1AQ9NR31 198 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 TAS2R8Q9NYW2 309 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 PRO2289Q9P1D8 64 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 CEP192Q8TEP8 1941 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 PZPP20742 1482 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 MYOM2P54296 1465 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 LRRC9Q6ZRR7 1453 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 HEATR5BQ9P2D3 2071 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 UNC13BO14795 1591 aa1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 IQGAP2Q13576 1575 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms