RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 IMMP2LQ96T52 175 aa8.38□□□□□ -1.07
SLIRP-212ENST00000613856 M0R2Z0 102 aa8.37□□□□□ -1.07
SLIRP-212ENST00000613856 CRXO43186 299 aaPredicted RBP8.37□□□□□ -1.07
SLIRP-212ENST00000613856 CXCL1P09341 107 aa8.37□□□□□ -1.07
SLIRP-212ENST00000613856 NUTF2P61970 127 aaKnown RBP8.37□□□□□ -1.07
SLIRP-212ENST00000613856 DEFB125Q8N687 156 aa8.37□□□□□ -1.07
SLIRP-212ENST00000613856 C20orf144Q9BQM9 153 aa8.37□□□□□ -1.07
SLIRP-212ENST00000613856 TUBA4BQ9H853 241 aa8.37□□□□□ -1.07
SLIRP-212ENST00000613856 SMCO4Q9NRQ5 59 aa8.37□□□□□ -1.07
SLIRP-212ENST00000613856 FAM231BA6NCW3 169 aa8.36□□□□□ -1.07
SLIRP-212ENST00000613856 A8MWL6 223 aa8.36□□□□□ -1.07
SLIRP-212ENST00000613856 J3KRW8 73 aa8.36□□□□□ -1.07
SLIRP-212ENST00000613856 INSP01308 110 aa8.36□□□□□ -1.07
SLIRP-212ENST00000613856 RNASE4P34096 147 aaKnown RBP8.36□□□□□ -1.07
SLIRP-212ENST00000613856 RPS20P60866 119 aaKnown RBP8.36□□□□□ -1.07
SLIRP-212ENST00000613856 KIR3DS1Q14943 382 aa8.36□□□□□ -1.07
SLIRP-212ENST00000613856 OR2D3Q8NGH3 330 aa8.36□□□□□ -1.07
SLIRP-212ENST00000613856 TSKUQ8WUA8 353 aa8.36□□□□□ -1.07
SLIRP-212ENST00000613856 GFRA4Q9GZZ7 299 aa8.36□□□□□ -1.07
SLIRP-212ENST00000613856 SRD5A3Q9H8P0 318 aa8.36□□□□□ -1.07
SLIRP-212ENST00000613856 IL36BQ9NZH7 164 aa8.36□□□□□ -1.07
SLIRP-212ENST00000613856 TRAV12-2A0A075B6T6 113 aa8.35□□□□□ -1.07
SLIRP-212ENST00000613856 SMIM27A0A1W2PRY6 76 aa8.35□□□□□ -1.07
SLIRP-212ENST00000613856 XKRY2A2RUG3 117 aa8.35□□□□□ -1.07
SLIRP-212ENST00000613856 TMEM189A5PLL7 270 aa8.35□□□□□ -1.07
SLIRP-212ENST00000613856 ZNF324O75467 553 aaPredicted RBP8.35□□□□□ -1.07
SLIRP-212ENST00000613856 SCO1O75880 301 aa8.35□□□□□ -1.07
SLIRP-212ENST00000613856 NHLRC4P0CG21 123 aaPredicted RBP8.35□□□□□ -1.07
SLIRP-212ENST00000613856 ZFAND6Q6FIF0 208 aa8.35□□□□□ -1.07
SLIRP-212ENST00000613856 CBLN2Q8IUK8 224 aa8.35□□□□□ -1.07
SLIRP-212ENST00000613856 C1QTNF4Q9BXJ3 329 aa8.35□□□□□ -1.07
SLIRP-212ENST00000613856 C11orf21Q9P2W6 132 aa8.35□□□□□ -1.07
SLIRP-212ENST00000613856 TRAV9-1A0A075B6T8 112 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 TRAV12-3A0A0B4J271 114 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 IGKV3D-20A0A0C4DH25 116 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 KIR2DL5BA0A0G2JN68 375 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 KIR2DL5BA0A0G2JPC4 375 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 A8MZ25 164 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 CA1P00915 261 aaPredicted RBP8.34□□□□□ -1.07
SLIRP-212ENST00000613856 ORM1P02763 201 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 FXYD7P58549 80 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 RPL19P84098 196 aaKnown RBP8.34□□□□□ -1.07
SLIRP-212ENST00000613856 TDRG1Q3Y452 100 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 TMEM88Q6PEY1 159 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 KCNIP4Q6PIL6 250 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 KIR2DL5AQ8N109 375 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 KIR2DL5BQ8NHK3 375 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 YPEL4Q96NS1 127 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 LINC00467Q9BRT7 94 aa8.34□□□□□ -1.07
SLIRP-212ENST00000613856 LOC102724200A0A096LPH7 203 aaPredicted RBP8.33□□□□□ -1.08
SLIRP-212ENST00000613856 GIG44P09565 113 aaPredicted RBP8.33□□□□□ -1.08
SLIRP-212ENST00000613856 RBMY1A1P0DJD3 496 aaKnown RBP8.33□□□□□ -1.08
SLIRP-212ENST00000613856 RBMY1CP0DJD4 496 aa8.33□□□□□ -1.08
SLIRP-212ENST00000613856 RPL35AP18077 110 aaKnown RBP8.33□□□□□ -1.08
SLIRP-212ENST00000613856 S100PP25815 95 aa8.33□□□□□ -1.08
SLIRP-212ENST00000613856 FOXA3P55318 350 aaPredicted RBP8.33□□□□□ -1.08
SLIRP-212ENST00000613856 RBMY1FQ15415 496 aaKnown RBP8.33□□□□□ -1.08
SLIRP-212ENST00000613856 DNLZQ5SXM8 178 aa8.33□□□□□ -1.08
SLIRP-212ENST00000613856 Q6ZQT7 251 aa8.33□□□□□ -1.08
SLIRP-212ENST00000613856 TMEM256Q8N2U0 113 aa8.33□□□□□ -1.08
SLIRP-212ENST00000613856 KCNS1Q96KK3 526 aa8.33□□□□□ -1.08
SLIRP-212ENST00000613856 NEU1Q99519 415 aa8.33□□□□□ -1.08
SLIRP-212ENST00000613856 IGHV1OR15-1A0A075B7D0 117 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 IGLC6P0CF74 106 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 IGHV4-30-4P0DP06 118 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 MED14OSP0DP75 135 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 ELOBQ15370 118 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 ANXA2RQ3ZCQ2 193 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 FAM159AQ6UWV7 190 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 ZNF575Q86XF7 245 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 GTSF1Q8WW33 167 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 BTF3L4Q96K17 158 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 RCHY1Q96PM5 261 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 PYGO2Q9BRQ0 406 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 CSTL1Q9H114 145 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 XCL2Q9UBD3 114 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 NAT8BQ9UHF3 227 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 NAGKQ9UJ70 344 aa8.32□□□□□ -1.08
SLIRP-212ENST00000613856 TRBV24-1A0A075B6N3 115 aa8.31□□□□□ -1.08
SLIRP-212ENST00000613856 TMSB15BA0A087X1C1 80 aa8.31□□□□□ -1.08
SLIRP-212ENST00000613856 A0A1W2PPQ1 181 aa8.31□□□□□ -1.08
SLIRP-212ENST00000613856 HIGD1CA8MV81 97 aa8.31□□□□□ -1.08
SLIRP-212ENST00000613856 CTRLP40313 264 aa8.31□□□□□ -1.08
SLIRP-212ENST00000613856 APOC4P55056 127 aa8.31□□□□□ -1.08
SLIRP-212ENST00000613856 MUC21Q5SSG8 566 aa8.31□□□□□ -1.08
SLIRP-212ENST00000613856 SBSPONQ8IVN8 264 aa8.31□□□□□ -1.08
SLIRP-212ENST00000613856 CSNK1G2-AS1Q8NCQ2 148 aa8.31□□□□□ -1.08
SLIRP-212ENST00000613856 TRGV11A0A075B6L2 103 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 SNAI2O43623 268 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 TYMSP04818 313 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 GZMBP10144 247 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 ASIPP42127 132 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 TCL1AP56279 114 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 C1orf158Q8N1D5 194 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 FER1L6-AS1Q8NA97 138 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 NUP35Q8NFH5 326 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 CNFNQ9BYD5 112 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 GOLT1BQ9Y3E0 138 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 URGCP-MRPS24S4R325 110 aa8.3□□□□□ -1.08
SLIRP-212ENST00000613856 GRIFINA4D1Z8 144 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms