RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 SH2D6Q7Z4S9 175 aa13.7□□□□□ -0.22
HMGXB3-206ENST00000613459 NPBQ8NG41 125 aa13.7□□□□□ -0.22
HMGXB3-206ENST00000613459 Q6ZSR3 168 aa13.7□□□□□ -0.22
HMGXB3-206ENST00000613459 IGFBPL1Q8WX77 278 aa13.7□□□□□ -0.22
HMGXB3-206ENST00000613459 TRAV12-1A0A0B4J245 112 aa13.7□□□□□ -0.22
HMGXB3-206ENST00000613459 PLA2G2EQ9NZK7 142 aa13.7□□□□□ -0.22
HMGXB3-206ENST00000613459 VPREB3Q9UKI3 123 aa13.7□□□□□ -0.22
HMGXB3-206ENST00000613459 RBM3P98179 157 aaKnown RBP13.69□□□□□ -0.22
HMGXB3-206ENST00000613459 ACACAQ13085 2346 aa13.69□□□□□ -0.22
HMGXB3-206ENST00000613459 WISP1O95388 367 aa13.69□□□□□ -0.22
HMGXB3-206ENST00000613459 AGPAT4-IT1Q9H0P7 198 aa13.69□□□□□ -0.22
HMGXB3-206ENST00000613459 PTPRDP23468 1912 aa13.68□□□□□ -0.22
HMGXB3-206ENST00000613459 ANGP03950 147 aaKnown RBP13.68□□□□□ -0.22
HMGXB3-206ENST00000613459 FAM120AOSQ5T036 256 aa13.68□□□□□ -0.22
HMGXB3-206ENST00000613459 IGLL5B9A064 214 aa13.68□□□□□ -0.22
HMGXB3-206ENST00000613459 DYNAPQ8N1N2 210 aa13.68□□□□□ -0.22
HMGXB3-206ENST00000613459 TDRG1Q3Y452 100 aa13.67□□□□□ -0.22
HMGXB3-206ENST00000613459 KRTAP27-1Q3LI81 207 aa13.67□□□□□ -0.22
HMGXB3-206ENST00000613459 KIAA2026Q5HYC2 2103 aa13.67□□□□□ -0.22
HMGXB3-206ENST00000613459 NBL1P41271 181 aa13.67□□□□□ -0.22
HMGXB3-206ENST00000613459 HEATR1Q9H583 2144 aaKnown RBP13.67□□□□□ -0.22
HMGXB3-206ENST00000613459 EGR2P11161 476 aaPredicted RBP13.66□□□□□ -0.22
HMGXB3-206ENST00000613459 ZNF524Q96C55 264 aa13.66□□□□□ -0.22
HMGXB3-206ENST00000613459 SS18L2Q9UHA2 77 aa13.66□□□□□ -0.22
HMGXB3-206ENST00000613459 hADV29S1A0JD25 119 aa13.66□□□□□ -0.22
HMGXB3-206ENST00000613459 H0YGX0 51 aa13.66□□□□□ -0.22
HMGXB3-206ENST00000613459 IGF2BP2-AS1Q96M15 143 aa13.66□□□□□ -0.22
HMGXB3-206ENST00000613459 FER1L5A0AVI2 2057 aa13.65□□□□□ -0.22
HMGXB3-206ENST00000613459 CRYGCP07315 174 aa13.65□□□□□ -0.22
HMGXB3-206ENST00000613459 ROS1P08922 2347 aa13.65□□□□□ -0.22
HMGXB3-206ENST00000613459 LHBP01229 141 aa13.65□□□□□ -0.22
HMGXB3-206ENST00000613459 RNF138Q8WVD3 245 aa13.65□□□□□ -0.22
HMGXB3-206ENST00000613459 PCP2Q8IVA1 136 aa13.65□□□□□ -0.22
HMGXB3-206ENST00000613459 NUPR1O60356 82 aa13.65□□□□□ -0.22
HMGXB3-206ENST00000613459 DIAPH2-AS1Q14236 149 aa13.65□□□□□ -0.22
HMGXB3-206ENST00000613459 PIP4P1Q86T03 277 aa13.65□□□□□ -0.22
HMGXB3-206ENST00000613459 C11orf53Q8IXP5 236 aa13.65□□□□□ -0.22
HMGXB3-206ENST00000613459 B5MCH6 92 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 PI4KAP42356 2102 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 MYO7BQ6PIF6 2116 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 IGF2-ASQ6U949 168 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 POLEQ07864 2286 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 U3KQE9 123 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 PLXNA2O75051 1894 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 TSC2P49815 1807 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 A0A0B4J2C4 111 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 C22orf46C9J442 243 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 C16orf74Q96GX8 76 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 Q9H8V8 135 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 CENPVL3A0A0U1RRI6 287 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 MED14OSP0DP75 135 aa13.64□□□□□ -0.23
HMGXB3-206ENST00000613459 RIF1Q5UIP0 2472 aaKnown RBP13.63□□□□□ -0.23
HMGXB3-206ENST00000613459 IGHG2P01859 326 aa13.63□□□□□ -0.23
HMGXB3-206ENST00000613459 GP9P14770 177 aa13.63□□□□□ -0.23
HMGXB3-206ENST00000613459 IGFL2Q6UWQ7 119 aa13.63□□□□□ -0.23
HMGXB3-206ENST00000613459 ATOX1O00244 68 aa13.63□□□□□ -0.23
HMGXB3-206ENST00000613459 DAZ2Q13117 558 aaKnown RBP13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 DAZ4Q86SG3 579 aaKnown RBP13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 ZMAT4Q9H898 229 aa13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 DAZ3Q9NR90 486 aaKnown RBP13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 J3QKU1 62 aa13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 NDUFC2O95298 119 aa13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 ASPHD1Q5U4P2 390 aa13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 F6UB75 175 aa13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 I3L2K1 104 aa13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 RNASE13Q5GAN3 156 aaKnown RBP13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 DENND4AQ7Z401 1863 aa13.62□□□□□ -0.23
HMGXB3-206ENST00000613459 CTSZQ9UBR2 303 aa13.61□□□□□ -0.23
HMGXB3-206ENST00000613459 ICOSQ9Y6W8 199 aa13.61□□□□□ -0.23
HMGXB3-206ENST00000613459 NLRC5Q86WI3 1866 aa13.61□□□□□ -0.23
HMGXB3-206ENST00000613459 IGLV11-55A0A075B6I3 123 aa13.61□□□□□ -0.23
HMGXB3-206ENST00000613459 C17orf77Q96MU5 243 aa13.61□□□□□ -0.23
HMGXB3-206ENST00000613459 HIGD1BQ9P298 99 aa13.61□□□□□ -0.23
HMGXB3-206ENST00000613459 GNRH2O43555 120 aa13.6□□□□□ -0.23
HMGXB3-206ENST00000613459 C9orf66Q5T8R8 295 aa13.6□□□□□ -0.23
HMGXB3-206ENST00000613459 TRBV6-1A0A0K0K1D8 114 aa13.6□□□□□ -0.23
HMGXB3-206ENST00000613459 WDR81Q562E7 1941 aa13.6□□□□□ -0.23
HMGXB3-206ENST00000613459 TMEM89A2RUT3 159 aa13.6□□□□□ -0.23
HMGXB3-206ENST00000613459 NOP10Q9NPE3 64 aaKnown RBP13.6□□□□□ -0.23
HMGXB3-206ENST00000613459 FANCMQ8IYD8 2048 aa13.59□□□□□ -0.23
HMGXB3-206ENST00000613459 CCL24O00175 119 aa13.59□□□□□ -0.23
HMGXB3-206ENST00000613459 DEFB112Q30KQ8 113 aa13.59□□□□□ -0.23
HMGXB3-206ENST00000613459 C16orf54Q6UWD8 224 aa13.59□□□□□ -0.23
HMGXB3-206ENST00000613459 MGAMO43451 1857 aa13.59□□□□□ -0.23
HMGXB3-206ENST00000613459 K7EQD1 137 aa13.59□□□□□ -0.23
HMGXB3-206ENST00000613459 FUSP35637 526 aaKnown RBP eCLIP13.59□□□□□ -0.23
HMGXB3-206ENST00000613459 GPR179Q6PRD1 2367 aa13.59□□□□□ -0.23
HMGXB3-206ENST00000613459 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.58□□□□□ -0.24
HMGXB3-206ENST00000613459 IGKV2-29A2NJV5 120 aaPredicted RBP13.58□□□□□ -0.24
HMGXB3-206ENST00000613459 CGB3P0DN86 165 aa13.58□□□□□ -0.24
HMGXB3-206ENST00000613459 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.24
HMGXB3-206ENST00000613459 MRPL23Q16540 153 aaKnown RBP13.58□□□□□ -0.24
HMGXB3-206ENST00000613459 DOCK11Q5JSL3 2073 aa13.57□□□□□ -0.24
HMGXB3-206ENST00000613459 K7EMT4 169 aa13.57□□□□□ -0.24
HMGXB3-206ENST00000613459 TEN1Q86WV5 123 aa13.57□□□□□ -0.24
HMGXB3-206ENST00000613459 J3KT08 172 aa13.57□□□□□ -0.24
HMGXB3-206ENST00000613459 K7EIM0 57 aa13.57□□□□□ -0.24
HMGXB3-206ENST00000613459 C1orf43Q9BWL3 253 aa13.57□□□□□ -0.24
HMGXB3-206ENST00000613459 IGHV7-81A0A0B4J1V7 117 aa13.57□□□□□ -0.24
HMGXB3-206ENST00000613459 MAPK1IP1LQ8NDC0 245 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms