RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 IGHV3-16A0A0C4DH30 117 aa12.55□□□□□ -0.4
VCX3A-203ENST00000612369 F6UZH7 168 aa12.55□□□□□ -0.4
VCX3A-203ENST00000612369 M0R2P5 195 aa12.55□□□□□ -0.4
VCX3A-203ENST00000612369 GNRH2O43555 120 aa12.55□□□□□ -0.4
VCX3A-203ENST00000612369 C8orf49Q96NF6 230 aa12.55□□□□□ -0.4
VCX3A-203ENST00000612369 PSG8Q9UQ74 426 aa12.55□□□□□ -0.4
VCX3A-203ENST00000612369 HERC2O95714 4834 aa12.55□□□□□ -0.4
VCX3A-203ENST00000612369 CTXND1A0A1B0GTU2 59 aa12.54□□□□□ -0.4
VCX3A-203ENST00000612369 G3V3Q6 166 aa12.54□□□□□ -0.4
VCX3A-203ENST00000612369 TYMSP04818 313 aa12.54□□□□□ -0.4
VCX3A-203ENST00000612369 FLI1Q01543 452 aaPredicted RBP12.54□□□□□ -0.4
VCX3A-203ENST00000612369 CYB561D1Q8N8Q1 229 aa12.54□□□□□ -0.4
VCX3A-203ENST00000612369 TMEM75Q8N9X5 138 aa12.54□□□□□ -0.4
VCX3A-203ENST00000612369 ZNF479Q96JC4 524 aa12.54□□□□□ -0.4
VCX3A-203ENST00000612369 SGK494Q96LW2 274 aa12.54□□□□□ -0.4
VCX3A-203ENST00000612369 TRAV4A0A0B4J268 109 aa12.53□□□□□ -0.4
VCX3A-203ENST00000612369 GGTLC3B5MD39 225 aa12.53□□□□□ -0.4
VCX3A-203ENST00000612369 TNP2Q05952 138 aa12.53□□□□□ -0.4
VCX3A-203ENST00000612369 ZFP69Q49AA0 526 aa12.53□□□□□ -0.4
VCX3A-203ENST00000612369 SAPCD1Q5SSQ6 148 aa12.53□□□□□ -0.4
VCX3A-203ENST00000612369 DNAH11Q96DT5 4516 aa12.53□□□□□ -0.4
VCX3A-203ENST00000612369 SIVA1O15304 175 aa12.52□□□□□ -0.41
VCX3A-203ENST00000612369 IGLV2-11P01706 119 aa12.52□□□□□ -0.41
VCX3A-203ENST00000612369 ORM1P02763 201 aa12.52□□□□□ -0.41
VCX3A-203ENST00000612369 SFTA3P0C7M3 94 aa12.52□□□□□ -0.41
VCX3A-203ENST00000612369 ZNF726P1Q15940 193 aa12.52□□□□□ -0.41
VCX3A-203ENST00000612369 SMUG1Q53HV7 270 aa12.52□□□□□ -0.41
VCX3A-203ENST00000612369 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.41
VCX3A-203ENST00000612369 NEGR1Q7Z3B1 354 aa12.52□□□□□ -0.41
VCX3A-203ENST00000612369 OR4C5Q8NGB2 326 aa12.52□□□□□ -0.41
VCX3A-203ENST00000612369 KRTAP1-5Q9BYS1 174 aa12.52□□□□□ -0.41
VCX3A-203ENST00000612369 NKX6-2Q9C056 277 aaPredicted RBP12.52□□□□□ -0.41
VCX3A-203ENST00000612369 ARPC5O15511 151 aa12.51□□□□□ -0.41
VCX3A-203ENST00000612369 GCGP01275 180 aa12.51□□□□□ -0.41
VCX3A-203ENST00000612369 PFN1P07737 140 aaKnown RBP12.51□□□□□ -0.41
VCX3A-203ENST00000612369 LYPD5Q6UWN5 251 aa12.51□□□□□ -0.41
VCX3A-203ENST00000612369 PCNPQ8WW12 178 aaKnown RBP12.51□□□□□ -0.41
VCX3A-203ENST00000612369 KIAA1109Q2LD37 5005 aa12.51□□□□□ -0.41
VCX3A-203ENST00000612369 K7EQD1 137 aa12.5□□□□□ -0.41
VCX3A-203ENST00000612369 CIDEAO60543 219 aa12.5□□□□□ -0.41
VCX3A-203ENST00000612369 SRIP30626 198 aa12.5□□□□□ -0.41
VCX3A-203ENST00000612369 ZNF80P51504 273 aaPredicted RBP12.5□□□□□ -0.41
VCX3A-203ENST00000612369 PRNTQ86SH4 94 aa12.5□□□□□ -0.41
VCX3A-203ENST00000612369 CYTL1Q9NRR1 136 aa12.5□□□□□ -0.41
VCX3A-203ENST00000612369 DYNC1H1Q14204 4646 aaKnown RBP12.5□□□□□ -0.41
VCX3A-203ENST00000612369 C9JCJ5 164 aa12.49□□□□□ -0.41
VCX3A-203ENST00000612369 NXPH4O95158 308 aa12.49□□□□□ -0.41
VCX3A-203ENST00000612369 PPT1P50897 306 aa12.49□□□□□ -0.41
VCX3A-203ENST00000612369 IFNA7P01567 189 aa12.48□□□□□ -0.41
VCX3A-203ENST00000612369 HIST1H2BAQ96A08 127 aa12.48□□□□□ -0.41
VCX3A-203ENST00000612369 TXNDC17Q9BRA2 123 aa12.48□□□□□ -0.41
VCX3A-203ENST00000612369 C11orf21Q9P2W6 132 aa12.48□□□□□ -0.41
VCX3A-203ENST00000612369 FAM74A7A6NL05 159 aa12.47□□□□□ -0.41
VCX3A-203ENST00000612369 GYPEP15421 78 aa12.47□□□□□ -0.41
VCX3A-203ENST00000612369 ZNF345Q14585 488 aa12.47□□□□□ -0.41
VCX3A-203ENST00000612369 ZNF876PQ49A33 203 aa12.47□□□□□ -0.41
VCX3A-203ENST00000612369 SH2D6Q7Z4S9 175 aa12.47□□□□□ -0.41
VCX3A-203ENST00000612369 PTH2Q96A98 100 aa12.47□□□□□ -0.41
VCX3A-203ENST00000612369 MAP1LC3B2A6NCE7 125 aa12.46□□□□□ -0.41
VCX3A-203ENST00000612369 K7EP13 123 aa12.46□□□□□ -0.41
VCX3A-203ENST00000612369 UBE2G2P60604 165 aa12.46□□□□□ -0.41
VCX3A-203ENST00000612369 ZNF575Q86XF7 245 aa12.46□□□□□ -0.41
VCX3A-203ENST00000612369 KCNRGQ8N5I3 272 aa12.46□□□□□ -0.41
VCX3A-203ENST00000612369 STOML3Q8TAV4 291 aa12.46□□□□□ -0.41
VCX3A-203ENST00000612369 C9orf85Q96MD7 179 aa12.46□□□□□ -0.41
VCX3A-203ENST00000612369 MAP1LC3BQ9GZQ8 125 aa12.46□□□□□ -0.41
VCX3A-203ENST00000612369 TRAV9-2A0A087WT02 112 aa12.45□□□□□ -0.42
VCX3A-203ENST00000612369 HMSDA8MTL9 139 aa12.45□□□□□ -0.42
VCX3A-203ENST00000612369 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
VCX3A-203ENST00000612369 PEX7O00628 323 aa12.45□□□□□ -0.42
VCX3A-203ENST00000612369 GATA1P15976 413 aaPredicted RBP12.45□□□□□ -0.42
VCX3A-203ENST00000612369 FGF8P55075 233 aaPredicted RBP12.45□□□□□ -0.42
VCX3A-203ENST00000612369 LINC00479Q96M42 142 aa12.45□□□□□ -0.42
VCX3A-203ENST00000612369 TCEAL7Q9BRU2 100 aa12.45□□□□□ -0.42
VCX3A-203ENST00000612369 ARL2-SNX15V9GYD0 113 aa12.45□□□□□ -0.42
VCX3A-203ENST00000612369 TRAV34A0A0B4J273 112 aa12.44□□□□□ -0.42
VCX3A-203ENST00000612369 C16orf90A8MZG2 172 aa12.44□□□□□ -0.42
VCX3A-203ENST00000612369 RS1O15537 224 aa12.44□□□□□ -0.42
VCX3A-203ENST00000612369 FHITP49789 147 aa12.44□□□□□ -0.42
VCX3A-203ENST00000612369 LINC00315P59091 139 aa12.44□□□□□ -0.42
VCX3A-203ENST00000612369 A0A0D9SG52 128 aa12.43□□□□□ -0.42
VCX3A-203ENST00000612369 SMLR1H3BR10 107 aa12.43□□□□□ -0.42
VCX3A-203ENST00000612369 SEC11BP0C7V7 166 aa12.43□□□□□ -0.42
VCX3A-203ENST00000612369 CFAP126Q5VTH2 177 aa12.43□□□□□ -0.42
VCX3A-203ENST00000612369 ZFP30Q9Y2G7 519 aa12.43□□□□□ -0.42
VCX3A-203ENST00000612369 LY96Q9Y6Y9 160 aa12.43□□□□□ -0.42
VCX3A-203ENST00000612369 TRBV6-4A0A1B0GX49 114 aa12.42□□□□□ -0.42
VCX3A-203ENST00000612369 UMAD1C9J7I0 102 aa12.42□□□□□ -0.42
VCX3A-203ENST00000612369 RNASE3P12724 160 aaKnown RBP12.42□□□□□ -0.42
VCX3A-203ENST00000612369 TIRAPP58753 221 aa12.42□□□□□ -0.42
VCX3A-203ENST00000612369 PIK3CD-AS1Q5SR53 167 aa12.42□□□□□ -0.42
VCX3A-203ENST00000612369 COX8CQ7Z4L0 72 aa12.42□□□□□ -0.42
VCX3A-203ENST00000612369 Q86TA4 180 aa12.42□□□□□ -0.42
VCX3A-203ENST00000612369 IGKV3D-20A0A0C4DH25 116 aa12.41□□□□□ -0.42
VCX3A-203ENST00000612369 PGPEP1LA6NFU8 196 aa12.41□□□□□ -0.42
VCX3A-203ENST00000612369 S100A4P26447 101 aaKnown RBP12.41□□□□□ -0.42
VCX3A-203ENST00000612369 ZNF506Q5JVG8 444 aa12.41□□□□□ -0.42
VCX3A-203ENST00000612369 DPPA3Q6W0C5 159 aa12.41□□□□□ -0.42
VCX3A-203ENST00000612369 NFE4Q86UQ8 179 aa12.41□□□□□ -0.42
VCX3A-203ENST00000612369 FMC1Q96HJ9 113 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 266.4 ms