RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 TMEM141Q96I45 108 aa9.71□□□□□ -0.85
CDH1-212ENST00000611625 A0A087WX48 190 aa9.71□□□□□ -0.86
CDH1-212ENST00000611625 K7ERJ3 54 aa9.71□□□□□ -0.86
CDH1-212ENST00000611625 ETDBQ3ZM63 59 aa9.71□□□□□ -0.86
CDH1-212ENST00000611625 CEND1Q8N111 149 aa9.71□□□□□ -0.86
CDH1-212ENST00000611625 C10orf126Q8N4M7 172 aa9.71□□□□□ -0.86
CDH1-212ENST00000611625 C20orf78Q9BR46 151 aa9.71□□□□□ -0.86
CDH1-212ENST00000611625 TIMM21Q9BVV7 248 aa9.71□□□□□ -0.86
CDH1-212ENST00000611625 WI2-2373I1.2A0A1W2PRP0 233 aa9.71□□□□□ -0.86
CDH1-212ENST00000611625 C2orf70A6NJV1 201 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 SCGB1A1P11684 91 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 SPXQ9BT56 116 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 DEFB131AP59861 70 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 TAL2Q16559 108 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 MORN3Q6PF18 240 aaPredicted RBP9.7□□□□□ -0.86
CDH1-212ENST00000611625 LY6G5BQ8NDX9 201 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 LENEPQ9Y5L5 61 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 CENPVL3A0A0U1RRI6 287 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 GDF5OSQ5U4N7 250 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 LINC00322Q6ZN03 302 aaPredicted RBP9.7□□□□□ -0.86
CDH1-212ENST00000611625 KLK9Q9UKQ9 250 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 TP53TG3Q9ULZ0 132 aa9.7□□□□□ -0.86
CDH1-212ENST00000611625 CEP350Q5VT06 3117 aa9.69□□□□□ -0.86
CDH1-212ENST00000611625 TRAV8-4A0A0B4J246 113 aa9.69□□□□□ -0.86
CDH1-212ENST00000611625 TRBV6-1A0A0K0K1D8 114 aa9.69□□□□□ -0.86
CDH1-212ENST00000611625 NBL1P41271 181 aa9.69□□□□□ -0.86
CDH1-212ENST00000611625 RPL36AP83881 106 aaKnown RBP9.69□□□□□ -0.86
CDH1-212ENST00000611625 RPL36ALQ969Q0 106 aaKnown RBP9.69□□□□□ -0.86
CDH1-212ENST00000611625 TRGV1A0A0A0MS02 117 aa9.69□□□□□ -0.86
CDH1-212ENST00000611625 TRGV4A0A0C4DH28 118 aa9.69□□□□□ -0.86
CDH1-212ENST00000611625 MBD6Q96DN6 1003 aa9.69□□□□□ -0.86
CDH1-212ENST00000611625 BUB3O43684 328 aa9.69□□□□□ -0.86
CDH1-212ENST00000611625 KIAA1549Q9HCM3 1950 aa9.69□□□□□ -0.86
CDH1-212ENST00000611625 IGHV1OR15-1A0A075B7D0 117 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 IGHV7-4-1A0A0J9YVY3 117 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 ADARB2-AS1A8MUL3 147 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 F6UB75 175 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 LINC01356Q8N9X3 169 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 ANAPC13Q9BS18 74 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 KNCNA6PVL3 124 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 C22orf34Q6ZV56 151 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 Q8N7P7 452 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 ATXN8Q156A1 80 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 Q8N9W7 124 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 TRAV12-2A0A075B6T6 113 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 INSP01308 110 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 GATA3P23771 443 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 PHLDA1Q8WV24 401 aaPredicted RBP9.68□□□□□ -0.86
CDH1-212ENST00000611625 MLST8Q9BVC4 326 aa9.68□□□□□ -0.86
CDH1-212ENST00000611625 CACNA1AO00555 2505 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 C9JAW5 83 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 F8W1H4 67 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 CPAMD8Q8IZJ3 1885 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 CUL9Q8IWT3 2517 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 TRBV25-1A0A075B6N4 114 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 PRAC2D3DTV9 90 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 CDKN1BP46527 198 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 TMEM95Q3KNT9 176 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 SPRY2O43597 315 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 CTRLP40313 264 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 ZNF493Q6ZR52 646 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 C1orf159Q96HA4 380 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 CHCHD5Q9BSY4 110 aa9.67□□□□□ -0.86
CDH1-212ENST00000611625 GAGE2BQ13066 116 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 GAGE2EQ4V326 116 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 FANCD2OSQ96PS1 177 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 PRO3102Q9H379 93 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 GAGE2DQ9UEU5 116 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 NAV3Q8IVL0 2385 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 PRSS29PA6NIE9 313 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 I3L3M4 83 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 TAX1BP3O14907 124 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 GNRH2O43555 120 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 IGHV3-53P01767 116 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 C2orf82Q6UX34 121 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 KLHL30-AS1Q8NEE0 82 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 RASL10AQ92737 203 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 TSSC4Q9Y5U2 329 aaPredicted RBP9.66□□□□□ -0.86
CDH1-212ENST00000611625 H3BMG7 143 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 C12orf74Q32Q52 190 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 RBMY1BA6NDE4 496 aaKnown RBP9.66□□□□□ -0.86
CDH1-212ENST00000611625 RBMY1EA6NEQ0 496 aaKnown RBP9.66□□□□□ -0.86
CDH1-212ENST00000611625 RBMY1DP0C7P1 496 aaKnown RBP9.66□□□□□ -0.86
CDH1-212ENST00000611625 RBMY1A1P0DJD3 496 aaKnown RBP9.66□□□□□ -0.86
CDH1-212ENST00000611625 RBMY1CP0DJD4 496 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 AMTNQ6UX39 209 aa9.66□□□□□ -0.86
CDH1-212ENST00000611625 TRBV20-1A0A075B6N2 111 aa9.65□□□□□ -0.86
CDH1-212ENST00000611625 H3BUA1 57 aa9.65□□□□□ -0.86
CDH1-212ENST00000611625 RNASE8Q8TDE3 154 aaKnown RBP9.65□□□□□ -0.86
CDH1-212ENST00000611625 UBE2E2Q96LR5 201 aa9.65□□□□□ -0.86
CDH1-212ENST00000611625 RHODO00212 210 aa9.65□□□□□ -0.86
CDH1-212ENST00000611625 TCF15Q12870 199 aa9.65□□□□□ -0.86
CDH1-212ENST00000611625 PIEZO2Q9H5I5 2752 aa9.65□□□□□ -0.86
CDH1-212ENST00000611625 K7EMI3 77 aa9.65□□□□□ -0.86
CDH1-212ENST00000611625 ZFAND6Q6FIF0 208 aa9.65□□□□□ -0.86
CDH1-212ENST00000611625 CSPG4Q6UVK1 2322 aa9.64□□□□□ -0.87
CDH1-212ENST00000611625 ZNF48Q96MX3 618 aaPredicted RBP9.64□□□□□ -0.87
CDH1-212ENST00000611625 TRAV13-1A0A0B4J241 112 aa9.64□□□□□ -0.87
CDH1-212ENST00000611625 CKS1BP61024 79 aa9.64□□□□□ -0.87
CDH1-212ENST00000611625 CFAP161Q6P656 301 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms