RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 TRBV7-9A0A0J9YWB2 115 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 RBAKDNA6NC62 111 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 FAM223BA6NKX1 122 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 G3V318 75 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 IGFL3Q6UXB1 125 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 FAM223AQ8IWN6 122 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 LINC00574Q9H8X3 128 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 LRP4O75096 1905 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 J3QQQ9 107 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 ATP5J2P56134 94 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 CEP350Q5VT06 3117 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 NAV3Q8IVL0 2385 aa11.44□□□□□ -0.58
VPS36-207ENST00000611132 TRAV8-3A0A0A6YYJ7 113 aa11.44□□□□□ -0.58
VPS36-207ENST00000611132 SAA4P35542 130 aa11.44□□□□□ -0.58
VPS36-207ENST00000611132 MYCNOSP40205 109 aa11.44□□□□□ -0.58
VPS36-207ENST00000611132 TMEM101Q96IK0 257 aa11.44□□□□□ -0.58
VPS36-207ENST00000611132 C7orf69Q9H7B7 122 aa11.44□□□□□ -0.58
VPS36-207ENST00000611132 TOMM7Q9P0U1 55 aa11.44□□□□□ -0.58
VPS36-207ENST00000611132 FOXE3Q13461 319 aa11.44□□□□□ -0.58
VPS36-207ENST00000611132 LY6G5BQ8NDX9 201 aa11.44□□□□□ -0.58
VPS36-207ENST00000611132 LINC01587Q99440 93 aa11.44□□□□□ -0.58
VPS36-207ENST00000611132 MORN3Q6PF18 240 aaPredicted RBP11.43□□□□□ -0.58
VPS36-207ENST00000611132 C2orf91Q6ZV80 131 aa11.43□□□□□ -0.58
VPS36-207ENST00000611132 WI2-2373I1.2A0A1W2PRP0 233 aa11.43□□□□□ -0.58
VPS36-207ENST00000611132 TRPT1Q86TN4 253 aaKnown RBP11.43□□□□□ -0.58
VPS36-207ENST00000611132 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
VPS36-207ENST00000611132 IGLV11-55A0A075B6I3 123 aa11.42□□□□□ -0.58
VPS36-207ENST00000611132 RNASE1P07998 156 aaKnown RBP11.42□□□□□ -0.58
VPS36-207ENST00000611132 IFITM1P13164 125 aa11.42□□□□□ -0.58
VPS36-207ENST00000611132 FOXI1Q12951 378 aa11.42□□□□□ -0.58
VPS36-207ENST00000611132 TEN1Q86WV5 123 aa11.42□□□□□ -0.58
VPS36-207ENST00000611132 DYSFO75923 2080 aa11.42□□□□□ -0.58
VPS36-207ENST00000611132 IGHV3-73A0A0B4J1V6 119 aa11.42□□□□□ -0.58
VPS36-207ENST00000611132 PCNTO95613 3336 aa11.42□□□□□ -0.58
VPS36-207ENST00000611132 NTN5Q8WTR8 489 aaPredicted RBP11.41□□□□□ -0.58
VPS36-207ENST00000611132 IGFL2Q6UWQ7 119 aa11.41□□□□□ -0.58
VPS36-207ENST00000611132 IGLV1-47P01700 117 aa11.41□□□□□ -0.58
VPS36-207ENST00000611132 GAGE5Q13069 117 aa11.41□□□□□ -0.58
VPS36-207ENST00000611132 GAGE6Q13070 117 aa11.41□□□□□ -0.58
VPS36-207ENST00000611132 SPAG8Q99932 426 aaPredicted RBP11.41□□□□□ -0.58
VPS36-207ENST00000611132 PTPRSQ13332 1948 aa11.41□□□□□ -0.58
VPS36-207ENST00000611132 CTSGP08311 255 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 MRPL53Q96EL3 112 aaKnown RBP11.4□□□□□ -0.58
VPS36-207ENST00000611132 LENEPQ9Y5L5 61 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 TRAV12-1A0A0B4J245 112 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 WISP2O76076 250 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 ANKHD1Q8IWZ3 2542 aaKnown RBP11.4□□□□□ -0.58
VPS36-207ENST00000611132 TTC28Q96AY4 2481 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 GAGE12JA6NER3 117 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 VWC2LB2RUY7 222 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 OVOL3O00110 214 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 GAGE7O76087 117 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 CFC1BP0CG36 223 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 CFC1P0CG37 223 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 GAGE12FP0CL80 117 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 GAGE12GP0CL81 117 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 GAGE12IP0CL82 117 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 GAGE4Q13068 117 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 ITLN2Q8WWU7 325 aaPredicted RBP11.4□□□□□ -0.58
VPS36-207ENST00000611132 DAZ1Q9NQZ3 744 aaKnown RBP11.4□□□□□ -0.58
VPS36-207ENST00000611132 TANC2Q9HCD6 1990 aa11.4□□□□□ -0.58
VPS36-207ENST00000611132 UBE2E1P51965 193 aa11.4□□□□□ -0.59
VPS36-207ENST00000611132 A0A1W2PNU3 283 aaPredicted RBP11.39□□□□□ -0.59
VPS36-207ENST00000611132 KLHL30-AS1Q8NEE0 82 aa11.39□□□□□ -0.59
VPS36-207ENST00000611132 B5MCH6 92 aa11.39□□□□□ -0.59
VPS36-207ENST00000611132 SEM1Q6ZVN7 128 aa11.39□□□□□ -0.59
VPS36-207ENST00000611132 IGHV1-69DA0A0B4J2H0 117 aa11.39□□□□□ -0.59
VPS36-207ENST00000611132 RPL39LQ96EH5 51 aaKnown RBP11.39□□□□□ -0.59
VPS36-207ENST00000611132 URB1-AS1Q96HZ7 61 aa11.39□□□□□ -0.59
VPS36-207ENST00000611132 DSCAML1Q8TD84 2053 aa11.38□□□□□ -0.59
VPS36-207ENST00000611132 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
VPS36-207ENST00000611132 E9PLD3 99 aa11.38□□□□□ -0.59
VPS36-207ENST00000611132 TM2D2Q9BX73 214 aa11.38□□□□□ -0.59
VPS36-207ENST00000611132 SPRY2O43597 315 aa11.38□□□□□ -0.59
VPS36-207ENST00000611132 PLA2G2CQ5R387 149 aa11.38□□□□□ -0.59
VPS36-207ENST00000611132 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
VPS36-207ENST00000611132 BRD3OSQ6XYD6 125 aa11.38□□□□□ -0.59
VPS36-207ENST00000611132 NPBQ8NG41 125 aa11.38□□□□□ -0.59
VPS36-207ENST00000611132 BUB3O43684 328 aa11.37□□□□□ -0.59
VPS36-207ENST00000611132 H3BUX3 64 aa11.37□□□□□ -0.59
VPS36-207ENST00000611132 I3L3M4 83 aa11.37□□□□□ -0.59
VPS36-207ENST00000611132 WT1P19544 449 aaPredicted RBP11.37□□□□□ -0.59
VPS36-207ENST00000611132 CRYBA4P53673 196 aa11.37□□□□□ -0.59
VPS36-207ENST00000611132 IGFBPL1Q8WX77 278 aa11.37□□□□□ -0.59
VPS36-207ENST00000611132 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
VPS36-207ENST00000611132 RBMY1BA6NDE4 496 aaKnown RBP11.36□□□□□ -0.59
VPS36-207ENST00000611132 RBMY1EA6NEQ0 496 aaKnown RBP11.36□□□□□ -0.59
VPS36-207ENST00000611132 RBMY1DP0C7P1 496 aaKnown RBP11.36□□□□□ -0.59
VPS36-207ENST00000611132 RBMY1A1P0DJD3 496 aaKnown RBP11.36□□□□□ -0.59
VPS36-207ENST00000611132 RBMY1CP0DJD4 496 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 C15orf53Q8NAA6 179 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 CCL19Q99731 98 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 NDUFA12Q9UI09 145 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 IGKV2D-26A0A0A0MRZ7 120 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 ZNF80P51504 273 aaPredicted RBP11.36□□□□□ -0.59
VPS36-207ENST00000611132 RASL10AQ92737 203 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 SS18L2Q9UHA2 77 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 NDUFA4O00483 81 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 GNRH2O43555 120 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 ATP6V0E2Q8NHE4 81 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms