RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TENM4Q6N022 2769 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 TRAV9-2A0A087WT02 112 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 C20orf202A1L168 122 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 H3BVH4 76 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 PCP4P48539 62 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 KLHDC1Q8N7A1 406 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 GAS8-AS1O95177 125 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 ELANEP08246 267 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 IGLC3P0DOY3 106 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 EVI2AP22794 236 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 ID1P41134 155 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 BATFQ16520 125 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 SPANXN1Q5VSR9 72 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
NEK3-205ENST00000610828 MCRIP2Q9BUT9 160 aaKnown RBP10.28□□□□□ -0.76
NEK3-205ENST00000610828 TCF21O43680 179 aa10.27□□□□□ -0.77
NEK3-205ENST00000610828 PPBPP02775 128 aa10.27□□□□□ -0.77
NEK3-205ENST00000610828 LGALS1P09382 135 aaKnown RBP10.27□□□□□ -0.77
NEK3-205ENST00000610828 RNASE4P34096 147 aaKnown RBP10.27□□□□□ -0.77
NEK3-205ENST00000610828 TFPI2P48307 235 aa10.27□□□□□ -0.77
NEK3-205ENST00000610828 SYNJ2BPP57105 145 aa10.27□□□□□ -0.77
NEK3-205ENST00000610828 FXYD7P58549 80 aa10.27□□□□□ -0.77
NEK3-205ENST00000610828 KIR3DS1Q14943 382 aa10.27□□□□□ -0.77
NEK3-205ENST00000610828 SMIM15Q7Z3B0 74 aa10.27□□□□□ -0.77
NEK3-205ENST00000610828 HIST2H2BCQ6DN03 193 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 ZNF747Q9BV97 191 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 UQCR10Q9UDW1 63 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 IGHV4OR15-8A0A075B7B6 117 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 A0A087WW49 117 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 A0A096LNJ9 63 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 SNAI2O43623 268 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 IGLL1P15814 213 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 PET117Q6UWS5 81 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 FAM19A4Q96LR4 140 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 MS4A6AQ9H2W1 248 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 MAP1LC3AQ9H492 121 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 TLN2Q9Y4G6 2542 aa10.26□□□□□ -0.77
NEK3-205ENST00000610828 TCAPO15273 167 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 WFDC11Q8NEX6 87 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 MYOZ3Q8TDC0 251 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 UBE2E2Q96LR5 201 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 CHD6Q8TD26 2715 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 TNFRSF6BO95407 300 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 GATA1P15976 413 aaPredicted RBP10.25□□□□□ -0.77
NEK3-205ENST00000610828 S100A4P26447 101 aaKnown RBP10.25□□□□□ -0.77
NEK3-205ENST00000610828 HOXD3P31249 432 aaPredicted RBP10.25□□□□□ -0.77
NEK3-205ENST00000610828 ANXA2RQ3ZCQ2 193 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 SAMD13Q5VXD3 122 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 Q6ZN92 141 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 PMCHL2Q9BQD1 86 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 ITPR3Q14573 2671 aa10.25□□□□□ -0.77
NEK3-205ENST00000610828 ZNF688P0C7X2 276 aa10.24□□□□□ -0.77
NEK3-205ENST00000610828 CACNG7P62955 275 aa10.24□□□□□ -0.77
NEK3-205ENST00000610828 WFDC12Q8WWY7 111 aa10.24□□□□□ -0.77
NEK3-205ENST00000610828 HBDP02042 147 aa10.24□□□□□ -0.77
NEK3-205ENST00000610828 MRPL52Q86TS9 123 aaKnown RBP10.24□□□□□ -0.77
NEK3-205ENST00000610828 LAMTOR2Q9Y2Q5 125 aa10.24□□□□□ -0.77
NEK3-205ENST00000610828 IGHV4-4A0A075B6R2 117 aa10.23□□□□□ -0.77
NEK3-205ENST00000610828 TRBV7-9A0A0J9YWB2 115 aa10.23□□□□□ -0.77
NEK3-205ENST00000610828 hDV102S1A0JD36 115 aa10.23□□□□□ -0.77
NEK3-205ENST00000610828 M0R381 172 aa10.23□□□□□ -0.77
NEK3-205ENST00000610828 SPRY2O43597 315 aa10.23□□□□□ -0.77
NEK3-205ENST00000610828 ASIPP42127 132 aa10.23□□□□□ -0.77
NEK3-205ENST00000610828 PSMG4Q5JS54 123 aa10.23□□□□□ -0.77
NEK3-205ENST00000610828 TRAV26-2A0A0B4J265 109 aa10.23□□□□□ -0.77
NEK3-205ENST00000610828 HNRNPA3P51991 378 aaKnown RBP10.23□□□□□ -0.77
NEK3-205ENST00000610828 APRG1Q8IVJ8 170 aa10.23□□□□□ -0.77
NEK3-205ENST00000610828 LGALS9O00182 355 aa10.22□□□□□ -0.77
NEK3-205ENST00000610828 G0S2P27469 103 aa10.22□□□□□ -0.77
NEK3-205ENST00000610828 SNRPD3P62318 126 aaKnown RBP10.22□□□□□ -0.77
NEK3-205ENST00000610828 DEFB136Q30KP8 78 aa10.22□□□□□ -0.77
NEK3-205ENST00000610828 LINC01545Q5VT33 79 aa10.22□□□□□ -0.77
NEK3-205ENST00000610828 RNF152Q8N8N0 203 aa10.22□□□□□ -0.77
NEK3-205ENST00000610828 CCDC168Q8NDH2 2452 aa10.22□□□□□ -0.77
NEK3-205ENST00000610828 PHLDA3Q9Y5J5 127 aa10.22□□□□□ -0.77
NEK3-205ENST00000610828 GNRH2O43555 120 aa10.22□□□□□ -0.77
NEK3-205ENST00000610828 C18orf65Q6ZTR6 163 aa10.22□□□□□ -0.77
NEK3-205ENST00000610828 MYO9AB2RTY4 2548 aa10.21□□□□□ -0.77
NEK3-205ENST00000610828 HSBP1L1C9JCN9 74 aa10.21□□□□□ -0.77
NEK3-205ENST00000610828 OR2K2Q8NGT1 345 aa10.21□□□□□ -0.77
NEK3-205ENST00000610828 NXT2Q9NPJ8 142 aaKnown RBP10.21□□□□□ -0.77
NEK3-205ENST00000610828 CBY1Q9Y3M2 126 aa10.21□□□□□ -0.77
NEK3-205ENST00000610828 KLLNB2CW77 178 aa10.21□□□□□ -0.78
NEK3-205ENST00000610828 Q8N2B8 174 aa10.21□□□□□ -0.78
NEK3-205ENST00000610828 CUBNO60494 3623 aa10.2□□□□□ -0.78
NEK3-205ENST00000610828 SONP18583 2426 aaKnown RBP10.2□□□□□ -0.78
NEK3-205ENST00000610828 AKAP9Q99996 3911 aa10.2□□□□□ -0.78
NEK3-205ENST00000610828 K7EQG2 157 aa10.2□□□□□ -0.78
NEK3-205ENST00000610828 IGKV3-20P01619 116 aa10.2□□□□□ -0.78
NEK3-205ENST00000610828 KHDC1LQ5JSQ8 128 aa10.2□□□□□ -0.78
NEK3-205ENST00000610828 TSPOP30536 169 aa10.19□□□□□ -0.78
NEK3-205ENST00000610828 LEPP41159 167 aa10.19□□□□□ -0.78
NEK3-205ENST00000610828 SLURP1P55000 103 aa10.19□□□□□ -0.78
NEK3-205ENST00000610828 FAM159AQ6UWV7 190 aa10.19□□□□□ -0.78
NEK3-205ENST00000610828 ST20Q9HBF5 79 aa10.19□□□□□ -0.78
NEK3-205ENST00000610828 FLNAP21333 2647 aaKnown RBP10.19□□□□□ -0.78
NEK3-205ENST00000610828 TRAV12-3A0A0B4J271 114 aa10.19□□□□□ -0.78
NEK3-205ENST00000610828 RNASE3P12724 160 aaKnown RBP10.19□□□□□ -0.78
NEK3-205ENST00000610828 ZNF25P17030 456 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms