RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 SRD5A3Q9H8P0 318 aa16.09■□□□□ 0.17
USF2-216ENST00000607959 TRAV12-3A0A0B4J271 114 aa16.09■□□□□ 0.17
USF2-216ENST00000607959 IGLC6P0CF74 106 aa16.09■□□□□ 0.17
USF2-216ENST00000607959 RBMY1A1P0DJD3 496 aaKnown RBP16.09■□□□□ 0.17
USF2-216ENST00000607959 RBMY1CP0DJD4 496 aa16.09■□□□□ 0.17
USF2-216ENST00000607959 RBMY1FQ15415 496 aaKnown RBP16.09■□□□□ 0.17
USF2-216ENST00000607959 PHOX2AO14813 284 aa16.08■□□□□ 0.16
USF2-216ENST00000607959 MCRIP2Q9BUT9 160 aaKnown RBP16.08■□□□□ 0.16
USF2-216ENST00000607959 C1orf196B1AJZ1 125 aa16.07■□□□□ 0.16
USF2-216ENST00000607959 CMC4P56277 68 aaPredicted RBP16.07■□□□□ 0.16
USF2-216ENST00000607959 ANXA2RQ3ZCQ2 193 aa16.07■□□□□ 0.16
USF2-216ENST00000607959 MUC21Q5SSG8 566 aa16.07■□□□□ 0.16
USF2-216ENST00000607959 A0A1B0GXF2 115 aa16.07■□□□□ 0.16
USF2-216ENST00000607959 TSPOP30536 169 aa16.07■□□□□ 0.16
USF2-216ENST00000607959 RPS20P60866 119 aaKnown RBP16.07■□□□□ 0.16
USF2-216ENST00000607959 ZFP82Q8N141 532 aa16.06■□□□□ 0.16
USF2-216ENST00000607959 MDFIQ99750 246 aa16.06■□□□□ 0.16
USF2-216ENST00000607959 NAGKQ9UJ70 344 aa16.06■□□□□ 0.16
USF2-216ENST00000607959 ARMS2P0C7Q2 107 aa16.06■□□□□ 0.16
USF2-216ENST00000607959 LYZL1Q6UWQ5 148 aa16.06■□□□□ 0.16
USF2-216ENST00000607959 STHQ8IWL8 128 aa16.06■□□□□ 0.16
USF2-216ENST00000607959 TRGC2P03986 189 aa16.05■□□□□ 0.16
USF2-216ENST00000607959 RAB5BP61020 215 aa16.05■□□□□ 0.16
USF2-216ENST00000607959 XKRY2A2RUG3 117 aa16.04■□□□□ 0.16
USF2-216ENST00000607959 DEFB125Q8N687 156 aa16.04■□□□□ 0.16
USF2-216ENST00000607959 MUC21A0A0G2JKD1 596 aa16.04■□□□□ 0.16
USF2-216ENST00000607959 MUC21A0A140T8X8 626 aa16.04■□□□□ 0.16
USF2-216ENST00000607959 GNRH2O43555 120 aa16.04■□□□□ 0.16
USF2-216ENST00000607959 CTRLP40313 264 aa16.04■□□□□ 0.16
USF2-216ENST00000607959 TMEM136Q6ZRR5 245 aa16.04■□□□□ 0.16
USF2-216ENST00000607959 FER1L6-AS1Q8NA97 138 aa16.04■□□□□ 0.16
USF2-216ENST00000607959 TPPP3Q9BW30 176 aa16.04■□□□□ 0.16
USF2-216ENST00000607959 GIG44P09565 113 aaPredicted RBP16.02■□□□□ 0.16
USF2-216ENST00000607959 PRR31Q5SQ13 230 aa16.02■□□□□ 0.16
USF2-216ENST00000607959 TDRG1Q3Y452 100 aa16.02■□□□□ 0.15
USF2-216ENST00000607959 OXLD1Q5BKU9 147 aa16.02■□□□□ 0.15
USF2-216ENST00000607959 ATP5L2Q7Z4Y8 100 aa16.02■□□□□ 0.15
USF2-216ENST00000607959 Q8N1Y9 231 aa16.02■□□□□ 0.15
USF2-216ENST00000607959 SSBP4Q9BWG4 385 aaPredicted RBP16.02■□□□□ 0.15
USF2-216ENST00000607959 TP53TG3Q9ULZ0 132 aa16.02■□□□□ 0.15
USF2-216ENST00000607959 A0A1B0GUT8 65 aa16■□□□□ 0.15
USF2-216ENST00000607959 CAMPP49913 170 aa16■□□□□ 0.15
USF2-216ENST00000607959 GNB1LQ9BYB4 327 aa16■□□□□ 0.15
USF2-216ENST00000607959 SPRY2O43597 315 aa16■□□□□ 0.15
USF2-216ENST00000607959 FABP9Q0Z7S8 132 aa16■□□□□ 0.15
USF2-216ENST00000607959 FRZBQ92765 325 aa16■□□□□ 0.15
USF2-216ENST00000607959 CNFNQ9BYD5 112 aa16■□□□□ 0.15
USF2-216ENST00000607959 XCL2Q9UBD3 114 aa16■□□□□ 0.15
USF2-216ENST00000607959 SNURFLB1AK76 121 aa15.99■□□□□ 0.15
USF2-216ENST00000607959 SNAI2O43623 268 aa15.99■□□□□ 0.15
USF2-216ENST00000607959 RNASE3P12724 160 aaKnown RBP15.99■□□□□ 0.15
USF2-216ENST00000607959 DNLZQ5SXM8 178 aa15.99■□□□□ 0.15
USF2-216ENST00000607959 RASL11AQ6T310 242 aa15.99■□□□□ 0.15
USF2-216ENST00000607959 DNAH3Q8TD57 4116 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 IGHV1OR15-1A0A075B7D0 117 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 H3BVH4 76 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 RPL35AP18077 110 aaKnown RBP15.98■□□□□ 0.15
USF2-216ENST00000607959 SSTP61278 116 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 HBBP68871 147 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 FAM159AQ6UWV7 190 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 GTSCR1Q86UQ5 136 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 LURAP1LQ8IV03 231 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 MSRB1Q9NZV6 116 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 TRAPPC1Q9Y5R8 145 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 PRM2P04554 102 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 OR10AG1Q8NH19 301 aa15.98■□□□□ 0.15
USF2-216ENST00000607959 MUC4Q99102 2169 aa15.97■□□□□ 0.15
USF2-216ENST00000607959 OR5AL1P0C617 328 aa15.97■□□□□ 0.15
USF2-216ENST00000607959 MRPL18Q9H0U6 180 aaKnown RBP15.97■□□□□ 0.15
USF2-216ENST00000607959 SCRT2Q9NQ03 307 aa15.97■□□□□ 0.15
USF2-216ENST00000607959 KRTAP10-11P60412 298 aa15.96■□□□□ 0.15
USF2-216ENST00000607959 C1orf158Q8N1D5 194 aa15.96■□□□□ 0.15
USF2-216ENST00000607959 KCNS1Q96KK3 526 aa15.96■□□□□ 0.15
USF2-216ENST00000607959 NTF3P20783 257 aa15.96■□□□□ 0.14
USF2-216ENST00000607959 ASIPP42127 132 aa15.96■□□□□ 0.14
USF2-216ENST00000607959 SLAQ13239 276 aa15.96■□□□□ 0.14
USF2-216ENST00000607959 WDR73Q6P4I2 378 aa15.96■□□□□ 0.14
USF2-216ENST00000607959 IGHV3-16A0A0C4DH30 117 aa15.95■□□□□ 0.14
USF2-216ENST00000607959 F2Z2F3 143 aa15.95■□□□□ 0.14
USF2-216ENST00000607959 RAB4BP61018 213 aa15.95■□□□□ 0.14
USF2-216ENST00000607959 RIGQ13278 110 aa15.95■□□□□ 0.14
USF2-216ENST00000607959 GATD1Q8NB37 220 aa15.95■□□□□ 0.14
USF2-216ENST00000607959 MDFICQ9P1T7 246 aa15.95■□□□□ 0.14
USF2-216ENST00000607959 C5orf52A6NGY3 159 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST1H2BKO60814 126 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 INSP01308 110 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST1H2BJP06899 126 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 TRGC1P0CF51 173 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST1H2BOP23527 126 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST1H2BBP33778 126 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST1H2BDP58876 126 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST1H2BCP62807 126 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST2H2BEQ16778 126 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 COX19Q49B96 90 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST1H2BHQ93079 126 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST1H2BNQ99877 126 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 HIST1H2BMQ99879 126 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 AMBPP02760 352 aa15.94■□□□□ 0.14
USF2-216ENST00000607959 TIMM8BQ9Y5J9 83 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms