RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 DPH3P1Q9H4G8 78 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 PRO0461Q9UI25 63 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 KLK5Q9Y337 293 aaPredicted RBP2.95□□□□□ -1.94
LINC00397-202ENST00000606785 BTAF1O14981 1849 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 BRWD3Q6RI45 1802 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 ARHGEF5Q12774 1597 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 RGPD8O14715 1765 aaPredicted RBP2.95□□□□□ -1.94
LINC00397-202ENST00000606785 RGPD5Q99666 1765 aa2.95□□□□□ -1.94
LINC00397-202ENST00000606785 FMN2Q9NZ56 1722 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 NOTCH2Q04721 2471 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 TRAV14DV4A0A0A6YYC5 116 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 LOC285095A0A1B0GVY8 99 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 A8MUN3 132 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 K7EM74 188 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 ATOX1O00244 68 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 LST1O00453 97 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 SDCBPO00560 298 aaPredicted RBP2.94□□□□□ -1.94
LINC00397-202ENST00000606785 OR1I1O60431 355 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 TCL1BO95988 128 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 IGHV3-7P01780 117 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 IGKCP01834 107 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 COL8A2P25067 703 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 SNRPD3P62318 126 aaKnown RBP2.94□□□□□ -1.94
LINC00397-202ENST00000606785 KPRPQ5T749 579 aaPredicted RBP2.94□□□□□ -1.94
LINC00397-202ENST00000606785 LGALS9CQ6DKI2 356 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 OR5C1Q8NGR4 320 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 C10orf105Q8TEF2 133 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 DSCR8Q96T75 97 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 PLA2G12AQ9BZM1 189 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 LSM2Q9Y333 95 aaKnown RBP2.94□□□□□ -1.94
LINC00397-202ENST00000606785 DOCK1Q14185 1865 aa2.94□□□□□ -1.94
LINC00397-202ENST00000606785 USP32Q8NFA0 1604 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 ALKQ9UM73 1620 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 THADAQ6YHU6 1953 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 DOCK4Q8N1I0 1966 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 PLCH1Q4KWH8 1693 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 THSD7AQ9UPZ6 1657 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 IGLV2-18A0A075B6J9 118 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 SOD1P00441 154 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 CD7P09564 240 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 HBBP68871 147 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 SPINT4Q6UDR6 99 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 PHF5AQ7RTV0 110 aaKnown RBP2.93□□□□□ -1.94
LINC00397-202ENST00000606785 SBSPONQ8IVN8 264 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 OR8B3Q8NGG8 313 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 STAG3L4Q8TBR4 150 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 MGST2Q99735 147 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 MANBALQ9NQG1 85 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 HHLA3Q9XRX5 114 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 COL5A3P25940 1745 aaPredicted RBP2.93□□□□□ -1.94
LINC00397-202ENST00000606785 CRYBG1Q9Y4K1 1723 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 C10orf71Q711Q0 1435 aa2.93□□□□□ -1.94
LINC00397-202ENST00000606785 SCN8AQ9UQD0 1980 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 ROBO1Q9Y6N7 1651 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 ADGRB1O14514 1584 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 AFDNP55196 1824 aaKnown RBP2.92□□□□□ -1.94
LINC00397-202ENST00000606785 TRBV6-7A0A0A0MS04 114 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 A0A0D9SEW6 157 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 TMEM256-PLSCR3K7ERE1 68 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 COX7A2LO14548 114 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 FSTL3O95633 263 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 SRP19P09132 144 aaKnown RBP2.92□□□□□ -1.94
LINC00397-202ENST00000606785 SSR2P43308 183 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 CSN1S1P47710 185 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 ZNF80P51504 273 aaPredicted RBP2.92□□□□□ -1.94
LINC00397-202ENST00000606785 TMEM155Q4W5P6 130 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 CFAP126Q5VTH2 177 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 OR5AS1Q8N127 324 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 MORN4Q8NDC4 146 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 H1FXQ92522 213 aaKnown RBP2.92□□□□□ -1.94
LINC00397-202ENST00000606785 GABARAPL1Q9H0R8 117 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 TRAPPC1Q9Y5R8 145 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 ASXL1Q8IXJ9 1541 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 TULP4Q9NRJ4 1543 aa2.92□□□□□ -1.94
LINC00397-202ENST00000606785 ABCC8Q09428 1581 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 TRAV2A0A0B4J234 112 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 TRAV1-1A0A0B4J248 108 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 UBE2L5PA0A1B0GUS4 154 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 MDFIC2A0A1B0GVS7 189 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 LTAP01374 205 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 TRGV3P03979 118 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 C3orf79P0CE67 100 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 CGB3P0DN86 165 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 CGB7P0DN87 165 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 COX8AP10176 69 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 ATP5EP56381 51 aaPredicted RBP2.91□□□□□ -1.94
LINC00397-202ENST00000606785 LINC00313P59037 77 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 UBE2G1P62253 170 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 UBE2L3P68036 154 aaKnown RBP2.91□□□□□ -1.94
LINC00397-202ENST00000606785 CCL8P80075 99 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 Q6ZQT7 251 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 AQP3Q92482 292 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 ABHD14BQ96IU4 210 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 TOPAZ1Q8N9V7 1692 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 TSC2P49815 1807 aa2.91□□□□□ -1.94
LINC00397-202ENST00000606785 RALGAPA2Q2PPJ7 1873 aa2.9□□□□□ -1.94
LINC00397-202ENST00000606785 CICQ96RK0 1608 aaPredicted RBP2.9□□□□□ -1.94
LINC00397-202ENST00000606785 HEATR5AQ86XA9 2040 aa2.9□□□□□ -1.94
LINC00397-202ENST00000606785 NEXMIFQ5QGS0 1516 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms