RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 LINC01559Q495D7 138 aa13.84□□□□□ -0.19
UBE2E3-209ENST00000602710 C15orf54Q8N8G6 183 aa13.84□□□□□ -0.19
UBE2E3-209ENST00000602710 RPP21Q9H633 154 aaKnown RBP13.84□□□□□ -0.19
UBE2E3-209ENST00000602710 V9GYV3 84 aa13.84□□□□□ -0.19
UBE2E3-209ENST00000602710 IGHV1OR15-1A0A075B7D0 117 aa13.83□□□□□ -0.19
UBE2E3-209ENST00000602710 TMEM189A5PLL7 270 aa13.83□□□□□ -0.19
UBE2E3-209ENST00000602710 H7BYZ3 331 aa13.83□□□□□ -0.19
UBE2E3-209ENST00000602710 UBE2CO00762 179 aa13.83□□□□□ -0.19
UBE2E3-209ENST00000602710 MT-ND4LP03901 98 aa13.83□□□□□ -0.19
UBE2E3-209ENST00000602710 S100A1P23297 94 aa13.83□□□□□ -0.19
UBE2E3-209ENST00000602710 FAM159AQ6UWV7 190 aa13.83□□□□□ -0.19
UBE2E3-209ENST00000602710 TP53TG3Q9ULZ0 132 aa13.83□□□□□ -0.19
UBE2E3-209ENST00000602710 GOLT1BQ9Y3E0 138 aa13.83□□□□□ -0.19
UBE2E3-209ENST00000602710 GNRH2O43555 120 aa13.83□□□□□ -0.2
UBE2E3-209ENST00000602710 GZMBP10144 247 aa13.83□□□□□ -0.2
UBE2E3-209ENST00000602710 RPS10P5Q9NQ39 176 aa13.83□□□□□ -0.2
UBE2E3-209ENST00000602710 GRIFINA4D1Z8 144 aa13.82□□□□□ -0.2
UBE2E3-209ENST00000602710 RHEBQ15382 184 aa13.82□□□□□ -0.2
UBE2E3-209ENST00000602710 ZNF705AQ6ZN79 300 aaPredicted RBP13.82□□□□□ -0.2
UBE2E3-209ENST00000602710 TMEM256Q8N2U0 113 aa13.82□□□□□ -0.2
UBE2E3-209ENST00000602710 PYGO2Q9BRQ0 406 aa13.82□□□□□ -0.2
UBE2E3-209ENST00000602710 TDRG1Q3Y452 100 aa13.81□□□□□ -0.2
UBE2E3-209ENST00000602710 MRAPQ8TCY5 172 aa13.81□□□□□ -0.2
UBE2E3-209ENST00000602710 ANAPC16Q96DE5 110 aa13.81□□□□□ -0.2
UBE2E3-209ENST00000602710 NBEAL2Q6ZNJ1 2754 aa13.8□□□□□ -0.2
UBE2E3-209ENST00000602710 TYMSP04818 313 aa13.8□□□□□ -0.2
UBE2E3-209ENST00000602710 AZU1P20160 251 aa13.8□□□□□ -0.2
UBE2E3-209ENST00000602710 Q6ZWC4 215 aa13.8□□□□□ -0.2
UBE2E3-209ENST00000602710 SBSPONQ8IVN8 264 aa13.8□□□□□ -0.2
UBE2E3-209ENST00000602710 RCHY1Q96PM5 261 aa13.8□□□□□ -0.2
UBE2E3-209ENST00000602710 CBY3A6NI87 242 aa13.79□□□□□ -0.2
UBE2E3-209ENST00000602710 PPP1R2P9O14990 202 aa13.79□□□□□ -0.2
UBE2E3-209ENST00000602710 DEFA6Q01524 100 aa13.79□□□□□ -0.2
UBE2E3-209ENST00000602710 RNF183Q96D59 192 aa13.79□□□□□ -0.2
UBE2E3-209ENST00000602710 KCNS1Q96KK3 526 aa13.79□□□□□ -0.2
UBE2E3-209ENST00000602710 LINC00467Q9BRT7 94 aa13.79□□□□□ -0.2
UBE2E3-209ENST00000602710 RETNQ9HD89 108 aa13.79□□□□□ -0.2
UBE2E3-209ENST00000602710 A0A087WWC5 75 aa13.78□□□□□ -0.2
UBE2E3-209ENST00000602710 A8MWL6 223 aa13.78□□□□□ -0.2
UBE2E3-209ENST00000602710 CT83Q5H943 113 aa13.78□□□□□ -0.2
UBE2E3-209ENST00000602710 GTSF1Q8WW33 167 aa13.78□□□□□ -0.2
UBE2E3-209ENST00000602710 CTDSP1Q9GZU7 261 aa13.78□□□□□ -0.2
UBE2E3-209ENST00000602710 MDFICQ9P1T7 246 aa13.78□□□□□ -0.2
UBE2E3-209ENST00000602710 X6R8D5 127 aa13.78□□□□□ -0.2
UBE2E3-209ENST00000602710 SPRY2O43597 315 aa13.77□□□□□ -0.21
UBE2E3-209ENST00000602710 TCL1AP56279 114 aa13.77□□□□□ -0.21
UBE2E3-209ENST00000602710 RPS20P60866 119 aaKnown RBP13.77□□□□□ -0.21
UBE2E3-209ENST00000602710 OR11H2Q8NH07 326 aa13.77□□□□□ -0.21
UBE2E3-209ENST00000602710 TSKUQ8WUA8 353 aa13.77□□□□□ -0.21
UBE2E3-209ENST00000602710 IGHV3-16A0A0C4DH30 117 aa13.76□□□□□ -0.21
UBE2E3-209ENST00000602710 XKRY2A2RUG3 117 aa13.76□□□□□ -0.21
UBE2E3-209ENST00000602710 OVOL2Q9BRP0 275 aa13.76□□□□□ -0.21
UBE2E3-209ENST00000602710 RNASE3P12724 160 aaKnown RBP13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 ASIPP42127 132 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 RRN3P1Q2M238 152 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 NEU1Q99519 415 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 IL36BQ9NZH7 164 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 TIMM8BQ9Y5J9 83 aaPredicted RBP13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 TRGV11A0A075B6L2 103 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 SMIM27A0A1W2PRY6 76 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 H3BVH4 76 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 SCO1O75880 301 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 S100A4P26447 101 aaKnown RBP13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 TPPP3Q9BW30 176 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 GSN-AS1Q9NRJ2 163 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 TMEM242Q9NWH2 141 aa13.75□□□□□ -0.21
UBE2E3-209ENST00000602710 CXCL1P09341 107 aa13.74□□□□□ -0.21
UBE2E3-209ENST00000602710 ARMS2P0C7Q2 107 aa13.74□□□□□ -0.21
UBE2E3-209ENST00000602710 IGLC6P0CF74 106 aa13.74□□□□□ -0.21
UBE2E3-209ENST00000602710 FAM3BP58499 235 aaPredicted RBP13.74□□□□□ -0.21
UBE2E3-209ENST00000602710 DNLZQ5SXM8 178 aa13.74□□□□□ -0.21
UBE2E3-209ENST00000602710 FER1L6-AS1Q8NA97 138 aa13.74□□□□□ -0.21
UBE2E3-209ENST00000602710 C11orf72Q8NBR9 251 aa13.74□□□□□ -0.21
UBE2E3-209ENST00000602710 RNASE8Q8TDE3 154 aaKnown RBP13.74□□□□□ -0.21
UBE2E3-209ENST00000602710 MUC21A0A0G2JKD1 596 aa13.73□□□□□ -0.21
UBE2E3-209ENST00000602710 MUC21A0A140T8X8 626 aa13.73□□□□□ -0.21
UBE2E3-209ENST00000602710 HIGD1CA8MV81 97 aa13.73□□□□□ -0.21
UBE2E3-209ENST00000602710 PGLYRP4Q96LB8 373 aa13.73□□□□□ -0.21
UBE2E3-209ENST00000602710 TP53TG1Q9Y2A0 90 aa13.73□□□□□ -0.21
UBE2E3-209ENST00000602710 TMEM88Q6PEY1 159 aa13.72□□□□□ -0.21
UBE2E3-209ENST00000602710 LYZL1Q6UWQ5 148 aa13.72□□□□□ -0.21
UBE2E3-209ENST00000602710 NUP35Q8NFH5 326 aa13.72□□□□□ -0.21
UBE2E3-209ENST00000602710 TMEM263Q8WUH6 116 aaKnown RBP13.72□□□□□ -0.21
UBE2E3-209ENST00000602710 GFRA4Q9GZZ7 299 aa13.72□□□□□ -0.21
UBE2E3-209ENST00000602710 URGCP-MRPS24S4R325 110 aa13.72□□□□□ -0.21
UBE2E3-209ENST00000602710 MUC4Q99102 2169 aa13.72□□□□□ -0.21
UBE2E3-209ENST00000602710 PLAC8L1A1L4L8 177 aa13.71□□□□□ -0.21
UBE2E3-209ENST00000602710 SMIM9A6NGZ8 99 aa13.71□□□□□ -0.21
UBE2E3-209ENST00000602710 FOXA3P55318 350 aaPredicted RBP13.71□□□□□ -0.21
UBE2E3-209ENST00000602710 SSTP61278 116 aa13.71□□□□□ -0.21
UBE2E3-209ENST00000602710 ZNF415Q09FC8 603 aa13.71□□□□□ -0.21
UBE2E3-209ENST00000602710 CBLN2Q8IUK8 224 aa13.71□□□□□ -0.21
UBE2E3-209ENST00000602710 C9orf85Q96MD7 179 aa13.71□□□□□ -0.21
UBE2E3-209ENST00000602710 TM2D3Q9BRN9 247 aa13.71□□□□□ -0.21
UBE2E3-209ENST00000602710 FAM231BA6NCW3 169 aa13.71□□□□□ -0.22
UBE2E3-209ENST00000602710 C16orf74Q96GX8 76 aa13.71□□□□□ -0.22
UBE2E3-209ENST00000602710 SSBP4Q9BWG4 385 aaPredicted RBP13.71□□□□□ -0.22
UBE2E3-209ENST00000602710 SCRT2Q9NQ03 307 aa13.71□□□□□ -0.22
UBE2E3-209ENST00000602710 NAT8BQ9UHF3 227 aa13.71□□□□□ -0.22
UBE2E3-209ENST00000602710 MEGF8Q7Z7M0 2845 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms