RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 LINC01559Q495D7 138 aa16.59■□□□□ 0.25
IRF3-227ENST00000600911 LINC01587Q99440 93 aa16.59■□□□□ 0.25
IRF3-227ENST00000600911 GRIFINA4D1Z8 144 aa16.59■□□□□ 0.25
IRF3-227ENST00000600911 SPRY2O43597 315 aa16.59■□□□□ 0.25
IRF3-227ENST00000600911 OSTCQ9NRP0 149 aa16.59■□□□□ 0.25
IRF3-227ENST00000600911 X6R8D5 127 aa16.59■□□□□ 0.25
IRF3-227ENST00000600911 IGHV1OR15-1A0A075B7D0 117 aa16.58■□□□□ 0.24
IRF3-227ENST00000600911 P01737 135 aa16.58■□□□□ 0.24
IRF3-227ENST00000600911 TYMSP04818 313 aa16.58■□□□□ 0.24
IRF3-227ENST00000600911 OR2D3Q8NGH3 330 aa16.58■□□□□ 0.24
IRF3-227ENST00000600911 TENM3Q9P273 2699 aa16.57■□□□□ 0.24
IRF3-227ENST00000600911 OR10G8Q8NGN5 311 aa16.57■□□□□ 0.24
IRF3-227ENST00000600911 DAZAP1Q96EP5 407 aaKnown RBP16.57■□□□□ 0.24
IRF3-227ENST00000600911 C20orf144Q9BQM9 153 aa16.57■□□□□ 0.24
IRF3-227ENST00000600911 RPP21Q9H633 154 aaKnown RBP16.57■□□□□ 0.24
IRF3-227ENST00000600911 C7orf77A4D0Y5 90 aa16.56■□□□□ 0.24
IRF3-227ENST00000600911 B4DEV8 164 aa16.56■□□□□ 0.24
IRF3-227ENST00000600911 H7BYZ3 331 aa16.56■□□□□ 0.24
IRF3-227ENST00000600911 GATCO43716 136 aaKnown RBP16.56■□□□□ 0.24
IRF3-227ENST00000600911 RNF183Q96D59 192 aa16.56■□□□□ 0.24
IRF3-227ENST00000600911 TMEM208Q9BTX3 173 aa16.56■□□□□ 0.24
IRF3-227ENST00000600911 BIN3Q9NQY0 253 aa16.56■□□□□ 0.24
IRF3-227ENST00000600911 UBE2CO00762 179 aa16.56■□□□□ 0.24
IRF3-227ENST00000600911 TDRG1Q3Y452 100 aa16.56■□□□□ 0.24
IRF3-227ENST00000600911 OVOL2Q9BRP0 275 aa16.56■□□□□ 0.24
IRF3-227ENST00000600911 MDFICQ9P1T7 246 aa16.56■□□□□ 0.24
IRF3-227ENST00000600911 MUC4Q99102 2169 aa16.55■□□□□ 0.24
IRF3-227ENST00000600911 TMEM189A5PLL7 270 aa16.55■□□□□ 0.24
IRF3-227ENST00000600911 FAM159AQ6UWV7 190 aa16.55■□□□□ 0.24
IRF3-227ENST00000600911 Q6ZWC4 215 aa16.55■□□□□ 0.24
IRF3-227ENST00000600911 SVBPQ8N300 66 aa16.55■□□□□ 0.24
IRF3-227ENST00000600911 RCHY1Q96PM5 261 aa16.55■□□□□ 0.24
IRF3-227ENST00000600911 PYGO2Q9BRQ0 406 aa16.55■□□□□ 0.24
IRF3-227ENST00000600911 GOLT1BQ9Y3E0 138 aa16.55■□□□□ 0.24
IRF3-227ENST00000600911 TMEM256Q8N2U0 113 aa16.53■□□□□ 0.24
IRF3-227ENST00000600911 GTSF1Q8WW33 167 aa16.53■□□□□ 0.24
IRF3-227ENST00000600911 CBY3A6NI87 242 aa16.52■□□□□ 0.24
IRF3-227ENST00000600911 RNASE3P12724 160 aaKnown RBP16.52■□□□□ 0.24
IRF3-227ENST00000600911 OR11H2Q8NH07 326 aa16.52■□□□□ 0.24
IRF3-227ENST00000600911 LINC00467Q9BRT7 94 aa16.52■□□□□ 0.24
IRF3-227ENST00000600911 IGHV3-16A0A0C4DH30 117 aa16.52■□□□□ 0.23
IRF3-227ENST00000600911 PLAC8L1A1L4L8 177 aa16.52■□□□□ 0.23
IRF3-227ENST00000600911 C15orf54Q8N8G6 183 aa16.52■□□□□ 0.23
IRF3-227ENST00000600911 C11orf72Q8NBR9 251 aa16.52■□□□□ 0.23
IRF3-227ENST00000600911 RPS10P5Q9NQ39 176 aa16.52■□□□□ 0.23
IRF3-227ENST00000600911 SNAPINO95295 136 aa16.51■□□□□ 0.23
IRF3-227ENST00000600911 TCL1AP56279 114 aa16.51■□□□□ 0.23
IRF3-227ENST00000600911 RNASE8Q8TDE3 154 aaKnown RBP16.51■□□□□ 0.23
IRF3-227ENST00000600911 TM2D3Q9BRN9 247 aa16.51■□□□□ 0.23
IRF3-227ENST00000600911 MUC21A0A0G2JKD1 596 aa16.49■□□□□ 0.23
IRF3-227ENST00000600911 MUC21A0A140T8X8 626 aa16.49■□□□□ 0.23
IRF3-227ENST00000600911 H3BVH4 76 aa16.49■□□□□ 0.23
IRF3-227ENST00000600911 DEFB4AO15263 64 aa16.49■□□□□ 0.23
IRF3-227ENST00000600911 MT-ND4LP03901 98 aa16.49■□□□□ 0.23
IRF3-227ENST00000600911 RHEBQ15382 184 aa16.49■□□□□ 0.23
IRF3-227ENST00000600911 GSN-AS1Q9NRJ2 163 aa16.49■□□□□ 0.23
IRF3-227ENST00000600911 COL7A1Q02388 2944 aa16.49■□□□□ 0.23
IRF3-227ENST00000600911 SCO1O75880 301 aa16.48■□□□□ 0.23
IRF3-227ENST00000600911 IGLC6P0CF74 106 aa16.48■□□□□ 0.23
IRF3-227ENST00000600911 KCNS1Q96KK3 526 aa16.48■□□□□ 0.23
IRF3-227ENST00000600911 NEU1Q99519 415 aa16.48■□□□□ 0.23
IRF3-227ENST00000600911 TIMM8BQ9Y5J9 83 aaPredicted RBP16.48■□□□□ 0.23
IRF3-227ENST00000600911 CT83Q5H943 113 aa16.48■□□□□ 0.23
IRF3-227ENST00000600911 Q8NAQ8 132 aa16.48■□□□□ 0.23
IRF3-227ENST00000600911 ANAPC16Q96DE5 110 aa16.48■□□□□ 0.23
IRF3-227ENST00000600911 ARMS2P0C7Q2 107 aa16.47■□□□□ 0.23
IRF3-227ENST00000600911 RRN3P1Q2M238 152 aa16.47■□□□□ 0.23
IRF3-227ENST00000600911 IL17DQ8TAD2 202 aa16.47■□□□□ 0.23
IRF3-227ENST00000600911 TSKUQ8WUA8 353 aa16.47■□□□□ 0.23
IRF3-227ENST00000600911 B9D2Q9BPU9 175 aa16.47■□□□□ 0.23
IRF3-227ENST00000600911 IGHV4-28A0A0C4DH34 117 aa16.46■□□□□ 0.23
IRF3-227ENST00000600911 DNLZQ5SXM8 178 aa16.46■□□□□ 0.23
IRF3-227ENST00000600911 TMEM263Q8WUH6 116 aaKnown RBP16.46■□□□□ 0.23
IRF3-227ENST00000600911 C9orf85Q96MD7 179 aa16.46■□□□□ 0.23
IRF3-227ENST00000600911 IL36BQ9NZH7 164 aa16.46■□□□□ 0.23
IRF3-227ENST00000600911 TP53TG1Q9Y2A0 90 aa16.46■□□□□ 0.23
IRF3-227ENST00000600911 A0A087WWC5 75 aa16.45■□□□□ 0.22
IRF3-227ENST00000600911 SMIM27A0A1W2PRY6 76 aa16.45■□□□□ 0.22
IRF3-227ENST00000600911 ASIPP42127 132 aa16.45■□□□□ 0.22
IRF3-227ENST00000600911 FAM3BP58499 235 aaPredicted RBP16.45■□□□□ 0.22
IRF3-227ENST00000600911 TRGV11A0A075B6L2 103 aa16.45■□□□□ 0.22
IRF3-227ENST00000600911 A8MWL6 223 aa16.45■□□□□ 0.22
IRF3-227ENST00000600911 PPP1R2P9O14990 202 aa16.45■□□□□ 0.22
IRF3-227ENST00000600911 CXCL1P09341 107 aa16.45■□□□□ 0.22
IRF3-227ENST00000600911 S100A1P23297 94 aa16.45■□□□□ 0.22
IRF3-227ENST00000600911 TPPP3Q9BW30 176 aa16.45■□□□□ 0.22
IRF3-227ENST00000600911 SCRT2Q9NQ03 307 aa16.45■□□□□ 0.22
IRF3-227ENST00000600911 HIGD1CA8MV81 97 aa16.44■□□□□ 0.22
IRF3-227ENST00000600911 EMP1P54849 157 aa16.44■□□□□ 0.22
IRF3-227ENST00000600911 RPS20P60866 119 aaKnown RBP16.44■□□□□ 0.22
IRF3-227ENST00000600911 SSTP61278 116 aa16.44■□□□□ 0.22
IRF3-227ENST00000600911 LYZL1Q6UWQ5 148 aa16.44■□□□□ 0.22
IRF3-227ENST00000600911 OR10AG1Q8NH19 301 aa16.44■□□□□ 0.22
IRF3-227ENST00000600911 PGLYRP4Q96LB8 373 aa16.44■□□□□ 0.22
IRF3-227ENST00000600911 SSBP4Q9BWG4 385 aaPredicted RBP16.44■□□□□ 0.22
IRF3-227ENST00000600911 CTDSP1Q9GZU7 261 aa16.44■□□□□ 0.22
IRF3-227ENST00000600911 SNAI2O43623 268 aa16.43■□□□□ 0.22
IRF3-227ENST00000600911 TMEM88Q6PEY1 159 aa16.43■□□□□ 0.22
IRF3-227ENST00000600911 CBLN2Q8IUK8 224 aa16.43■□□□□ 0.22
IRF3-227ENST00000600911 FER1L6-AS1Q8NA97 138 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms