RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 LYNX1P0DP58 116 aa12.43□□□□□ -0.42
SYDE1-204ENST00000600440 Q1RN00 199 aa12.43□□□□□ -0.42
SYDE1-204ENST00000600440 NRACQ8N912 160 aa12.43□□□□□ -0.42
SYDE1-204ENST00000600440 C17orf100A8MU93 164 aa12.43□□□□□ -0.42
SYDE1-204ENST00000600440 RPL39LQ96EH5 51 aaKnown RBP12.43□□□□□ -0.42
SYDE1-204ENST00000600440 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 GAGE7O76087 117 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 CRYGBP07316 175 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 GAGE12FP0CL80 117 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 GAGE12GP0CL81 117 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 GAGE12IP0CL82 117 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 GAGE4Q13068 117 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 LYRM7Q5U5X0 104 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 TIMM23O14925 209 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 SLC25A20O43772 301 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 NDUFV3P56181 108 aaKnown RBP12.42□□□□□ -0.42
SYDE1-204ENST00000600440 Q6ZS46 218 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 NDUFA11Q86Y39 141 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 LINC00311Q8N616 119 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 ACACAQ13085 2346 aa12.42□□□□□ -0.42
SYDE1-204ENST00000600440 TMEM178BH3BS89 294 aa12.41□□□□□ -0.42
SYDE1-204ENST00000600440 ARRDC1-AS1Q9H2J1 176 aa12.41□□□□□ -0.42
SYDE1-204ENST00000600440 TECTAO75443 2155 aa12.41□□□□□ -0.42
SYDE1-204ENST00000600440 IGHV4-39P01824 125 aa12.41□□□□□ -0.42
SYDE1-204ENST00000600440 MFAP4P55083 255 aa12.41□□□□□ -0.42
SYDE1-204ENST00000600440 RPL32P62910 135 aaKnown RBP12.41□□□□□ -0.42
SYDE1-204ENST00000600440 TMEM155Q4W5P6 130 aa12.41□□□□□ -0.42
SYDE1-204ENST00000600440 NTN5Q8WTR8 489 aaPredicted RBP12.41□□□□□ -0.42
SYDE1-204ENST00000600440 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
SYDE1-204ENST00000600440 SMIM2Q9BVW6 85 aa12.41□□□□□ -0.42
SYDE1-204ENST00000600440 DYNLRB1Q9NP97 96 aa12.41□□□□□ -0.42
SYDE1-204ENST00000600440 SMAD5-AS1Q9Y6J3 95 aa12.41□□□□□ -0.42
SYDE1-204ENST00000600440 UBE2D1P51668 147 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 LINC01559Q495D7 138 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 C2orf66Q6UXQ4 117 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 RASL10AQ92737 203 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 LRBAP50851 2863 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 BUB1B-PAK6H3BSN5 160 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 IGHG4P01861 327 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 UBE2D3P61077 147 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 UBE2D2P62837 147 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 TMEM170BQ5T4T1 132 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 C21orf62Q9NYP8 219 aa12.4□□□□□ -0.42
SYDE1-204ENST00000600440 SPTA1P02549 2419 aa12.4□□□□□ -0.43
SYDE1-204ENST00000600440 IGHV3-64A0A075B6Q5 118 aa12.39□□□□□ -0.43
SYDE1-204ENST00000600440 TMEM262E9PQX1 116 aa12.39□□□□□ -0.43
SYDE1-204ENST00000600440 C14orf178Q8N769 122 aaPredicted RBP12.39□□□□□ -0.43
SYDE1-204ENST00000600440 BAALCQ8WXS3 180 aa12.39□□□□□ -0.43
SYDE1-204ENST00000600440 CD7P09564 240 aa12.39□□□□□ -0.43
SYDE1-204ENST00000600440 ADIPOQQ15848 244 aa12.39□□□□□ -0.43
SYDE1-204ENST00000600440 LINC01546A6NGU7 62 aa12.38□□□□□ -0.43
SYDE1-204ENST00000600440 CFC1BP0CG36 223 aa12.38□□□□□ -0.43
SYDE1-204ENST00000600440 CFC1P0CG37 223 aa12.38□□□□□ -0.43
SYDE1-204ENST00000600440 THBDP07204 575 aa12.38□□□□□ -0.43
SYDE1-204ENST00000600440 IFITM1P13164 125 aa12.38□□□□□ -0.43
SYDE1-204ENST00000600440 DLX6P56179 175 aa12.37□□□□□ -0.43
SYDE1-204ENST00000600440 RAB1BQ9H0U4 201 aa12.37□□□□□ -0.43
SYDE1-204ENST00000600440 S100A4P26447 101 aaKnown RBP12.37□□□□□ -0.43
SYDE1-204ENST00000600440 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
SYDE1-204ENST00000600440 CNFNQ9BYD5 112 aa12.37□□□□□ -0.43
SYDE1-204ENST00000600440 AGPAT4-IT1Q9H0P7 198 aa12.37□□□□□ -0.43
SYDE1-204ENST00000600440 RELNP78509 3460 aa12.37□□□□□ -0.43
SYDE1-204ENST00000600440 TRAV17A0A0B4J275 112 aa12.36□□□□□ -0.43
SYDE1-204ENST00000600440 C11orf86A6NJI1 115 aa12.36□□□□□ -0.43
SYDE1-204ENST00000600440 SUMO2P61956 95 aaKnown RBP12.36□□□□□ -0.43
SYDE1-204ENST00000600440 TEX49A0A1B0GTD5 131 aa12.36□□□□□ -0.43
SYDE1-204ENST00000600440 RHODO00212 210 aa12.36□□□□□ -0.43
SYDE1-204ENST00000600440 TNFRSF13BO14836 293 aaPredicted RBP12.36□□□□□ -0.43
SYDE1-204ENST00000600440 DUSP14O95147 198 aaKnown RBP12.36□□□□□ -0.43
SYDE1-204ENST00000600440 CITED1Q99966 193 aa12.36□□□□□ -0.43
SYDE1-204ENST00000600440 TRAV2A0A0B4J234 112 aa12.35□□□□□ -0.43
SYDE1-204ENST00000600440 BSPH1Q075Z2 132 aa12.35□□□□□ -0.43
SYDE1-204ENST00000600440 C10orf126Q8N4M7 172 aa12.35□□□□□ -0.43
SYDE1-204ENST00000600440 PRO1854Q9UHT4 67 aa12.35□□□□□ -0.43
SYDE1-204ENST00000600440 ORMDL2Q53FV1 153 aa12.35□□□□□ -0.43
SYDE1-204ENST00000600440 C15orf53Q8NAA6 179 aa12.35□□□□□ -0.43
SYDE1-204ENST00000600440 FANCD2OSQ96PS1 177 aa12.35□□□□□ -0.43
SYDE1-204ENST00000600440 ASH1LQ9NR48 2969 aaKnown RBP12.34□□□□□ -0.43
SYDE1-204ENST00000600440 TRAV12-1A0A0B4J245 112 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 A0A0J9YY99 117 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 IGLV1-47P01700 117 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 TCF15Q12870 199 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 Q6ZS92 163 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 VCX2Q9H322 139 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 CLEC3BP05452 202 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 IGHV7-4-1A0A0J9YVY3 117 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 NBR2O15453 112 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 IGF1P05019 195 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 DEFB109BQ30KR1 87 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 MEIG1Q5JSS6 88 aa12.34□□□□□ -0.43
SYDE1-204ENST00000600440 TSPEAR-AS2P59090 65 aa12.33□□□□□ -0.44
SYDE1-204ENST00000600440 DEFB1P60022 68 aa12.33□□□□□ -0.44
SYDE1-204ENST00000600440 Q8N1Y9 231 aa12.33□□□□□ -0.44
SYDE1-204ENST00000600440 FAM215AQ9Y5M1 114 aa12.33□□□□□ -0.44
SYDE1-204ENST00000600440 A4D1N5 150 aa12.33□□□□□ -0.44
SYDE1-204ENST00000600440 F8W735 103 aaPredicted RBP12.33□□□□□ -0.44
SYDE1-204ENST00000600440 HERVK_113P61574 105 aa12.33□□□□□ -0.44
SYDE1-204ENST00000600440 TOMM6Q96B49 74 aa12.33□□□□□ -0.44
SYDE1-204ENST00000600440 NDPQ00604 133 aa12.32□□□□□ -0.44
SYDE1-204ENST00000600440 TRAV8-4A0A0B4J246 113 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms