RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 APC2O95996 2303 aa14.24□□□□□ -0.13
ARHGEF1-221ENST00000600387 CENPVL3A0A0U1RRI6 287 aa14.24□□□□□ -0.13
ARHGEF1-221ENST00000600387 ZNF815PA8K554 130 aa14.24□□□□□ -0.13
ARHGEF1-221ENST00000600387 UBE2D1P51668 147 aa14.24□□□□□ -0.13
ARHGEF1-221ENST00000600387 Q8NA96 180 aa14.24□□□□□ -0.13
ARHGEF1-221ENST00000600387 BAALCQ8WXS3 180 aa14.24□□□□□ -0.13
ARHGEF1-221ENST00000600387 TACC2O95359 2948 aa14.24□□□□□ -0.13
ARHGEF1-221ENST00000600387 MAP1BP46821 2468 aaKnown RBP14.23□□□□□ -0.13
ARHGEF1-221ENST00000600387 BDP1A6H8Y1 2624 aa14.23□□□□□ -0.13
ARHGEF1-221ENST00000600387 CNOT1A5YKK6 2376 aaKnown RBP14.23□□□□□ -0.13
ARHGEF1-221ENST00000600387 LYRM7Q5U5X0 104 aa14.23□□□□□ -0.13
ARHGEF1-221ENST00000600387 RASL10AQ92737 203 aa14.23□□□□□ -0.13
ARHGEF1-221ENST00000600387 DPH3P1Q9H4G8 78 aa14.23□□□□□ -0.13
ARHGEF1-221ENST00000600387 ECSCRQ19T08 205 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 C2orf66Q6UXQ4 117 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 SCGB1D4Q6XE38 83 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 IGHV3OR16-13A0A075B7E8 117 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 IGHV3-74A0A0B4J1X5 117 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 LINC01549A6NIU2 74 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 CLEC19AQ6UXS0 136 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 Q6ZQT7 251 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 LINC01560Q8TB33 94 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 CCDC140Q96MF4 163 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 MGAQ8IWI9 3026 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 OTOGLQ3ZCN5 2332 aa14.22□□□□□ -0.13
ARHGEF1-221ENST00000600387 M0R381 172 aa14.21□□□□□ -0.13
ARHGEF1-221ENST00000600387 SMCPP49901 116 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF1-221ENST00000600387 SRSF9Q13242 221 aaKnown RBP eCLIP14.21□□□□□ -0.13
ARHGEF1-221ENST00000600387 LCNL1Q6ZST4 164 aa14.21□□□□□ -0.13
ARHGEF1-221ENST00000600387 SYT8Q8NBV8 401 aa14.21□□□□□ -0.13
ARHGEF1-221ENST00000600387 WNK2Q9Y3S1 2297 aa14.21□□□□□ -0.13
ARHGEF1-221ENST00000600387 PRSS29PA6NIE9 313 aa14.21□□□□□ -0.14
ARHGEF1-221ENST00000600387 EEF1AKMT3Q96AZ1 226 aa14.21□□□□□ -0.14
ARHGEF1-221ENST00000600387 LY6HO94772 140 aa14.2□□□□□ -0.14
ARHGEF1-221ENST00000600387 COX6B1P14854 86 aa14.2□□□□□ -0.14
ARHGEF1-221ENST00000600387 VKORC1Q9BQB6 163 aa14.2□□□□□ -0.14
ARHGEF1-221ENST00000600387 U3KQE9 123 aa14.2□□□□□ -0.14
ARHGEF1-221ENST00000600387 TSPAN13O95857 204 aa14.2□□□□□ -0.14
ARHGEF1-221ENST00000600387 PPP1R17O96001 155 aa14.2□□□□□ -0.14
ARHGEF1-221ENST00000600387 PSMB2P49721 201 aa14.2□□□□□ -0.14
ARHGEF1-221ENST00000600387 UBE2D3P61077 147 aa14.2□□□□□ -0.14
ARHGEF1-221ENST00000600387 UBE2D2P62837 147 aa14.2□□□□□ -0.14
ARHGEF1-221ENST00000600387 CDIP1Q9H305 208 aa14.2□□□□□ -0.14
ARHGEF1-221ENST00000600387 TRBV7-1A0A0A6YYK4 115 aa14.19□□□□□ -0.14
ARHGEF1-221ENST00000600387 ATP6V0E1O15342 81 aa14.19□□□□□ -0.14
ARHGEF1-221ENST00000600387 PRR9Q5T870 116 aa14.19□□□□□ -0.14
ARHGEF1-221ENST00000600387 C16orf92Q96LL3 132 aa14.19□□□□□ -0.14
ARHGEF1-221ENST00000600387 LOC107984156A0A0G2JMH3 177 aa14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 ARL17AQ8IVW1 177 aa14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 ZNF418Q8TF45 676 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 RPL39LQ96EH5 51 aaKnown RBP14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 VCX2Q9H322 139 aa14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 IGHV3-49A0A0A0MS15 119 aa14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 PAPPA-AS1Q5QFB9 102 aa14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 C9orf139Q6ZV77 190 aa14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 NFE4Q86UQ8 179 aa14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 PLEKHB2Q96CS7 222 aa14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 LINC00477Q96M19 166 aa14.18□□□□□ -0.14
ARHGEF1-221ENST00000600387 TRAV21A0A0B4J279 112 aa14.17□□□□□ -0.14
ARHGEF1-221ENST00000600387 MED14OSP0DP75 135 aa14.17□□□□□ -0.14
ARHGEF1-221ENST00000600387 S100A4P26447 101 aaKnown RBP14.17□□□□□ -0.14
ARHGEF1-221ENST00000600387 CRYBA4P53673 196 aa14.17□□□□□ -0.14
ARHGEF1-221ENST00000600387 RNF223E7ERA6 249 aa14.17□□□□□ -0.14
ARHGEF1-221ENST00000600387 CD7P09564 240 aa14.17□□□□□ -0.14
ARHGEF1-221ENST00000600387 ASIPP42127 132 aa14.17□□□□□ -0.14
ARHGEF1-221ENST00000600387 PHLDA3Q9Y5J5 127 aa14.17□□□□□ -0.14
ARHGEF1-221ENST00000600387 EP300Q09472 2414 aaPredicted RBP14.17□□□□□ -0.14
ARHGEF1-221ENST00000600387 CACNA1HO95180 2353 aa14.16□□□□□ -0.14
ARHGEF1-221ENST00000600387 SPINK8P0C7L1 97 aa14.16□□□□□ -0.14
ARHGEF1-221ENST00000600387 HERVK_113P61574 105 aa14.16□□□□□ -0.14
ARHGEF1-221ENST00000600387 C14orf178Q8N769 122 aaPredicted RBP14.16□□□□□ -0.14
ARHGEF1-221ENST00000600387 PPDPFLQ8WWR9 84 aa14.16□□□□□ -0.14
ARHGEF1-221ENST00000600387 GEMIN7Q9H840 131 aaKnown RBP14.16□□□□□ -0.14
ARHGEF1-221ENST00000600387 PIEZO2Q9H5I5 2752 aa14.16□□□□□ -0.14
ARHGEF1-221ENST00000600387 ITLN2Q8WWU7 325 aaPredicted RBP14.16□□□□□ -0.14
ARHGEF1-221ENST00000600387 TRBV20-1A0A075B6N2 111 aa14.15□□□□□ -0.14
ARHGEF1-221ENST00000600387 IGHV1-69DA0A0B4J2H0 117 aa14.15□□□□□ -0.14
ARHGEF1-221ENST00000600387 MGPP08493 103 aa14.15□□□□□ -0.14
ARHGEF1-221ENST00000600387 ZFP2Q6ZN57 461 aa14.15□□□□□ -0.14
ARHGEF1-221ENST00000600387 BSNQ9UPA5 3926 aa14.15□□□□□ -0.14
ARHGEF1-221ENST00000600387 PRR30Q53SZ7 412 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF1-221ENST00000600387 TEN1Q86WV5 123 aa14.15□□□□□ -0.14
ARHGEF1-221ENST00000600387 NDUFA11Q86Y39 141 aa14.15□□□□□ -0.14
ARHGEF1-221ENST00000600387 ZFAND2AQ8N6M9 145 aa14.15□□□□□ -0.14
ARHGEF1-221ENST00000600387 CLUHP3Q96NS8 147 aa14.15□□□□□ -0.14
ARHGEF1-221ENST00000600387 Q6ZUT4 128 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 OR10J6PQ8NGY7 276 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 GLMPQ8WWB7 406 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 C20orf173Q96LM9 149 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 ACACAQ13085 2346 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 LAMA5O15230 3695 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 A0A0J9YY99 117 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 G3V318 75 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 OVOL1O14753 267 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 IGF1P05019 195 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 CRYGDP07320 174 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 KLHL30-AS1Q8NEE0 82 aa14.13□□□□□ -0.15
ARHGEF1-221ENST00000600387 TRAV26-1A0A087WT03 109 aa14.12□□□□□ -0.15
ARHGEF1-221ENST00000600387 J3KRW8 73 aa14.12□□□□□ -0.15
ARHGEF1-221ENST00000600387 FBXL19-AS1Q494R0 122 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms