RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 F6UZH7 168 aa15.81■□□□□ 0.12
SSBP4-205ENST00000598159 SIVA1O15304 175 aa15.81■□□□□ 0.12
SSBP4-205ENST00000598159 LYPD5Q6UWN5 251 aa15.81■□□□□ 0.12
SSBP4-205ENST00000598159 NEGR1Q7Z3B1 354 aa15.81■□□□□ 0.12
SSBP4-205ENST00000598159 ZNF575Q86XF7 245 aa15.81■□□□□ 0.12
SSBP4-205ENST00000598159 SDF2L1Q9HCN8 221 aa15.81■□□□□ 0.12
SSBP4-205ENST00000598159 FXYD6-FXYD2A0A087WZ82 144 aa15.8■□□□□ 0.12
SSBP4-205ENST00000598159 RNF222A6NCQ9 220 aa15.8■□□□□ 0.12
SSBP4-205ENST00000598159 SFTA3P0C7M3 94 aa15.8■□□□□ 0.12
SSBP4-205ENST00000598159 RPL7L1Q6DKI1 246 aaKnown RBP15.8■□□□□ 0.12
SSBP4-205ENST00000598159 SGK494Q96LW2 274 aa15.8■□□□□ 0.12
SSBP4-205ENST00000598159 EPDR1Q9UM22 224 aa15.8■□□□□ 0.12
SSBP4-205ENST00000598159 DNAH11Q96DT5 4516 aa15.79■□□□□ 0.12
SSBP4-205ENST00000598159 TRAV4A0A0B4J268 109 aa15.79■□□□□ 0.12
SSBP4-205ENST00000598159 TYMSP04818 313 aa15.79■□□□□ 0.12
SSBP4-205ENST00000598159 OR2T35Q8NGX2 323 aa15.79■□□□□ 0.12
SSBP4-205ENST00000598159 PSG8Q9UQ74 426 aa15.79■□□□□ 0.12
SSBP4-205ENST00000598159 DYNC1H1Q14204 4646 aaKnown RBP15.79■□□□□ 0.12
SSBP4-205ENST00000598159 FBLL1A6NHQ2 334 aaKnown RBP15.78■□□□□ 0.12
SSBP4-205ENST00000598159 TAAR5O14804 337 aa15.78■□□□□ 0.12
SSBP4-205ENST00000598159 ORM1P02763 201 aa15.78■□□□□ 0.12
SSBP4-205ENST00000598159 OR4C5Q8NGB2 326 aa15.78■□□□□ 0.12
SSBP4-205ENST00000598159 KRTAP17-1Q9BYP8 105 aa15.78■□□□□ 0.12
SSBP4-205ENST00000598159 A0A1W2PRE2 83 aa15.77■□□□□ 0.12
SSBP4-205ENST00000598159 C16orf90A8MZG2 172 aa15.77■□□□□ 0.12
SSBP4-205ENST00000598159 K7EQD1 137 aa15.77■□□□□ 0.12
SSBP4-205ENST00000598159 NXPH4O95158 308 aa15.77■□□□□ 0.12
SSBP4-205ENST00000598159 RGS21Q2M5E4 152 aa15.77■□□□□ 0.12
SSBP4-205ENST00000598159 PCNPQ8WW12 178 aaKnown RBP15.77■□□□□ 0.12
SSBP4-205ENST00000598159 SRIP30626 198 aa15.76■□□□□ 0.11
SSBP4-205ENST00000598159 FLI1Q01543 452 aaPredicted RBP15.76■□□□□ 0.11
SSBP4-205ENST00000598159 CYB561D1Q8N8Q1 229 aa15.76■□□□□ 0.11
SSBP4-205ENST00000598159 PCLOQ9Y6V0 5065 aa15.75■□□□□ 0.11
SSBP4-205ENST00000598159 GGTLC3B5MD39 225 aa15.75■□□□□ 0.11
SSBP4-205ENST00000598159 IGLV2-11P01706 119 aa15.75■□□□□ 0.11
SSBP4-205ENST00000598159 GYPEP15421 78 aa15.75■□□□□ 0.11
SSBP4-205ENST00000598159 SMUG1Q53HV7 270 aa15.75■□□□□ 0.11
SSBP4-205ENST00000598159 SAPCD1Q5SSQ6 148 aa15.75■□□□□ 0.11
SSBP4-205ENST00000598159 TMEM75Q8N9X5 138 aa15.75■□□□□ 0.11
SSBP4-205ENST00000598159 CTXND1A0A1B0GTU2 59 aa15.74■□□□□ 0.11
SSBP4-205ENST00000598159 C9JCJ5 164 aa15.74■□□□□ 0.11
SSBP4-205ENST00000598159 GCGP01275 180 aa15.74■□□□□ 0.11
SSBP4-205ENST00000598159 PFN1P07737 140 aaKnown RBP15.74■□□□□ 0.11
SSBP4-205ENST00000598159 ZNF80P51504 273 aaPredicted RBP15.74■□□□□ 0.11
SSBP4-205ENST00000598159 ZFP69Q49AA0 526 aa15.74■□□□□ 0.11
SSBP4-205ENST00000598159 PRNTQ86SH4 94 aa15.74■□□□□ 0.11
SSBP4-205ENST00000598159 TXNDC17Q9BRA2 123 aa15.74■□□□□ 0.11
SSBP4-205ENST00000598159 TRAV9-2A0A087WT02 112 aa15.73■□□□□ 0.11
SSBP4-205ENST00000598159 CIDEAO60543 219 aa15.73■□□□□ 0.11
SSBP4-205ENST00000598159 LINC00315P59091 139 aa15.73■□□□□ 0.11
SSBP4-205ENST00000598159 AKR1C8PQ5T2L2 129 aa15.73■□□□□ 0.11
SSBP4-205ENST00000598159 ZNF726P1Q15940 193 aa15.72■□□□□ 0.11
SSBP4-205ENST00000598159 SH2D6Q7Z4S9 175 aa15.72■□□□□ 0.11
SSBP4-205ENST00000598159 NKX6-2Q9C056 277 aaPredicted RBP15.72■□□□□ 0.11
SSBP4-205ENST00000598159 C11orf21Q9P2W6 132 aa15.72■□□□□ 0.11
SSBP4-205ENST00000598159 ZNF876PQ49A33 203 aa15.71■□□□□ 0.11
SSBP4-205ENST00000598159 SPATA12Q7Z6I5 190 aa15.71■□□□□ 0.11
SSBP4-205ENST00000598159 G3V3Q6 166 aa15.7■□□□□ 0.1
SSBP4-205ENST00000598159 K7EP13 123 aa15.7■□□□□ 0.1
SSBP4-205ENST00000598159 IFNA7P01567 189 aa15.7■□□□□ 0.1
SSBP4-205ENST00000598159 PPT1P50897 306 aa15.7■□□□□ 0.1
SSBP4-205ENST00000598159 PTH2Q96A98 100 aa15.7■□□□□ 0.1
SSBP4-205ENST00000598159 LY96Q9Y6Y9 160 aa15.7■□□□□ 0.1
SSBP4-205ENST00000598159 ARPC5O15511 151 aa15.69■□□□□ 0.1
SSBP4-205ENST00000598159 GATA1P15976 413 aaPredicted RBP15.69■□□□□ 0.1
SSBP4-205ENST00000598159 LINC00479Q96M42 142 aa15.69■□□□□ 0.1
SSBP4-205ENST00000598159 C9orf85Q96MD7 179 aa15.69■□□□□ 0.1
SSBP4-205ENST00000598159 RS1O15537 224 aa15.68■□□□□ 0.1
SSBP4-205ENST00000598159 Q6ZRN7 208 aaPredicted RBP15.68■□□□□ 0.1
SSBP4-205ENST00000598159 NFE4Q86UQ8 179 aa15.68■□□□□ 0.1
SSBP4-205ENST00000598159 CYTL1Q9NRR1 136 aa15.68■□□□□ 0.1
SSBP4-205ENST00000598159 TRAV34A0A0B4J273 112 aa15.67■□□□□ 0.1
SSBP4-205ENST00000598159 FABP5P3A8MUU1 101 aa15.67■□□□□ 0.1
SSBP4-205ENST00000598159 CDK2AP2O75956 126 aa15.67■□□□□ 0.1
SSBP4-205ENST00000598159 FGF8P55075 233 aaPredicted RBP15.67■□□□□ 0.1
SSBP4-205ENST00000598159 UBE2G2P60604 165 aa15.67■□□□□ 0.1
SSBP4-205ENST00000598159 CFAP126Q5VTH2 177 aa15.67■□□□□ 0.1
SSBP4-205ENST00000598159 HIST1H2BAQ96A08 127 aa15.67■□□□□ 0.1
SSBP4-205ENST00000598159 FAM74A7A6NL05 159 aa15.66■□□□□ 0.1
SSBP4-205ENST00000598159 EVI2AP22794 236 aa15.66■□□□□ 0.1
SSBP4-205ENST00000598159 ARL2-SNX15V9GYD0 113 aa15.66■□□□□ 0.1
SSBP4-205ENST00000598159 LOC100131303A0A0U1RQF7 123 aa15.65■□□□□ 0.1
SSBP4-205ENST00000598159 TRBV6-4A0A1B0GX49 114 aa15.65■□□□□ 0.1
SSBP4-205ENST00000598159 PGPEP1LA6NFU8 196 aa15.65■□□□□ 0.1
SSBP4-205ENST00000598159 PEX7O00628 323 aa15.65■□□□□ 0.1
SSBP4-205ENST00000598159 RNASE3P12724 160 aaKnown RBP15.65■□□□□ 0.1
SSBP4-205ENST00000598159 TIRAPP58753 221 aa15.65■□□□□ 0.1
SSBP4-205ENST00000598159 PRADC1Q9BSG0 188 aa15.65■□□□□ 0.1
SSBP4-205ENST00000598159 DNAH10OSP0CZ25 163 aa15.64■□□□□ 0.09
SSBP4-205ENST00000598159 DPPA3Q6W0C5 159 aa15.64■□□□□ 0.09
SSBP4-205ENST00000598159 WFDC10BQ8IUB3 73 aa15.64■□□□□ 0.09
SSBP4-205ENST00000598159 SLC25A29Q8N8R3 303 aa15.64■□□□□ 0.09
SSBP4-205ENST00000598159 NHLRC2Q8NBF2 726 aa15.64■□□□□ 0.09
SSBP4-205ENST00000598159 TNFRSF18Q9Y5U5 241 aa15.64■□□□□ 0.09
SSBP4-205ENST00000598159 IGKV3D-20A0A0C4DH25 116 aa15.63■□□□□ 0.09
SSBP4-205ENST00000598159 MAP1LC3B2A6NCE7 125 aa15.63■□□□□ 0.09
SSBP4-205ENST00000598159 KRTAP10-2P60368 255 aa15.63■□□□□ 0.09
SSBP4-205ENST00000598159 ZNF506Q5JVG8 444 aa15.63■□□□□ 0.09
SSBP4-205ENST00000598159 STOML3Q8TAV4 291 aa15.63■□□□□ 0.09
SSBP4-205ENST00000598159 MAP1LC3BQ9GZQ8 125 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms