RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 DAZ2Q13117 558 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-208ENST00000595726 ANXA2RQ3ZCQ2 193 aa9.3□□□□□ -0.92
SHKBP1-208ENST00000595726 FAM74A1Q5RGS3 127 aa9.3□□□□□ -0.92
SHKBP1-208ENST00000595726 EIF4E3Q8N5X7 224 aaKnown RBP9.3□□□□□ -0.92
SHKBP1-208ENST00000595726 ZNF680Q8NEM1 530 aa9.3□□□□□ -0.92
SHKBP1-208ENST00000595726 CMTM2Q8TAZ6 248 aa9.3□□□□□ -0.92
SHKBP1-208ENST00000595726 RAB24Q969Q5 203 aa9.3□□□□□ -0.92
SHKBP1-208ENST00000595726 RPH3ALQ9UNE2 315 aa9.3□□□□□ -0.92
SHKBP1-208ENST00000595726 IGLV5-52A0A0A0MRZ9 124 aa9.29□□□□□ -0.92
SHKBP1-208ENST00000595726 BORCS7-ASMTA0A0B4J1R7 106 aa9.29□□□□□ -0.92
SHKBP1-208ENST00000595726 SMLR1H3BR10 107 aa9.29□□□□□ -0.92
SHKBP1-208ENST00000595726 ARPC5O15511 151 aa9.29□□□□□ -0.92
SHKBP1-208ENST00000595726 NFE4Q86UQ8 179 aa9.29□□□□□ -0.92
SHKBP1-208ENST00000595726 SUN5Q8TC36 379 aa9.29□□□□□ -0.92
SHKBP1-208ENST00000595726 TMED6Q8WW62 240 aa9.29□□□□□ -0.92
SHKBP1-208ENST00000595726 LENEPQ9Y5L5 61 aa9.29□□□□□ -0.92
SHKBP1-208ENST00000595726 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 RGS13O14921 159 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 GCHFRP30047 84 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 GNG5P63218 68 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 IBA57Q5T440 356 aaKnown RBP9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 Q6ZTI0 123 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 GOLT1AQ6ZVE7 132 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 LINC00528Q8N1L1 170 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 ARL6IP6Q8N6S5 226 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 TMPRSS5Q9H3S3 457 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 GSN-AS1Q9NRJ2 163 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 TP53TG3Q9ULZ0 132 aa9.28□□□□□ -0.92
SHKBP1-208ENST00000595726 TCL1AP56279 114 aa9.27□□□□□ -0.93
SHKBP1-208ENST00000595726 Q6AWC8 147 aa9.27□□□□□ -0.93
SHKBP1-208ENST00000595726 ST6GAL2Q96JF0 529 aa9.27□□□□□ -0.93
SHKBP1-208ENST00000595726 ACTR3CQ9C0K3 210 aaPredicted RBP9.27□□□□□ -0.93
SHKBP1-208ENST00000595726 TRAV8-1A0A0A6YYK1 113 aa9.26□□□□□ -0.93
SHKBP1-208ENST00000595726 TAAR5O14804 337 aa9.26□□□□□ -0.93
SHKBP1-208ENST00000595726 CXorf1O96002 111 aa9.26□□□□□ -0.93
SHKBP1-208ENST00000595726 ZNF726P1Q15940 193 aa9.26□□□□□ -0.93
SHKBP1-208ENST00000595726 CYTL1Q9NRR1 136 aa9.26□□□□□ -0.93
SHKBP1-208ENST00000595726 KLF12Q9Y4X4 402 aa9.26□□□□□ -0.93
SHKBP1-208ENST00000595726 CTXND1A0A1B0GTU2 59 aa9.25□□□□□ -0.93
SHKBP1-208ENST00000595726 GGTLC3B5MD39 225 aa9.25□□□□□ -0.93
SHKBP1-208ENST00000595726 SPINK4O60575 86 aa9.25□□□□□ -0.93
SHKBP1-208ENST00000595726 ZNF345Q14585 488 aa9.25□□□□□ -0.93
SHKBP1-208ENST00000595726 MUC21Q5SSG8 566 aa9.25□□□□□ -0.93
SHKBP1-208ENST00000595726 C5orf17Q8NAS9 161 aa9.25□□□□□ -0.93
SHKBP1-208ENST00000595726 TVP23CQ96ET8 276 aa9.25□□□□□ -0.93
SHKBP1-208ENST00000595726 ARPC5LQ9BPX5 153 aa9.25□□□□□ -0.93
SHKBP1-208ENST00000595726 TMEM167BQ9NRX6 74 aa9.25□□□□□ -0.93
SHKBP1-208ENST00000595726 MSRB1Q9NZV6 116 aa9.25□□□□□ -0.93
SHKBP1-208ENST00000595726 TRGV1A0A0A0MS02 117 aa9.24□□□□□ -0.93
SHKBP1-208ENST00000595726 SERTM2A0A1B0GWG4 89 aa9.24□□□□□ -0.93
SHKBP1-208ENST00000595726 F6UZH7 168 aa9.24□□□□□ -0.93
SHKBP1-208ENST00000595726 TCRAP04437 139 aa9.24□□□□□ -0.93
SHKBP1-208ENST00000595726 ZNF415Q09FC8 603 aa9.24□□□□□ -0.93
SHKBP1-208ENST00000595726 AKR1C8PQ5T2L2 129 aa9.24□□□□□ -0.93
SHKBP1-208ENST00000595726 OR11H4Q8NGC9 324 aa9.24□□□□□ -0.93
SHKBP1-208ENST00000595726 TRGV2A0A075B6R0 118 aa9.23□□□□□ -0.93
SHKBP1-208ENST00000595726 SUMO1P63165 101 aaKnown RBP9.23□□□□□ -0.93
SHKBP1-208ENST00000595726 IQCF2Q8IXL9 164 aa9.23□□□□□ -0.93
SHKBP1-208ENST00000595726 KCNRGQ8N5I3 272 aa9.23□□□□□ -0.93
SHKBP1-208ENST00000595726 SGK494Q96LW2 274 aa9.23□□□□□ -0.93
SHKBP1-208ENST00000595726 TREM1Q9NP99 234 aa9.23□□□□□ -0.93
SHKBP1-208ENST00000595726 MRPL16Q9NX20 251 aaKnown RBP9.23□□□□□ -0.93
SHKBP1-208ENST00000595726 TRAV9-2A0A087WT02 112 aa9.22□□□□□ -0.93
SHKBP1-208ENST00000595726 A0A1W2PRE2 83 aa9.22□□□□□ -0.93
SHKBP1-208ENST00000595726 LRCOL1A6NCL2 159 aa9.22□□□□□ -0.93
SHKBP1-208ENST00000595726 HMSDA8MTL9 139 aa9.22□□□□□ -0.93
SHKBP1-208ENST00000595726 OXTP01178 125 aa9.22□□□□□ -0.93
SHKBP1-208ENST00000595726 TDRG1Q3Y452 100 aa9.22□□□□□ -0.93
SHKBP1-208ENST00000595726 LYPD5Q6UWN5 251 aa9.22□□□□□ -0.93
SHKBP1-208ENST00000595726 FAM159AQ6UWV7 190 aa9.22□□□□□ -0.93
SHKBP1-208ENST00000595726 EPDR1Q9UM22 224 aa9.22□□□□□ -0.93
SHKBP1-208ENST00000595726 PKHD1L1Q86WI1 4243 aa9.21□□□□□ -0.93
SHKBP1-208ENST00000595726 TRGV11A0A075B6L2 103 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 TRAV21A0A0B4J279 112 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 K7EQM0 130 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 IGLV2-11P01706 119 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 FGF8P55075 233 aaPredicted RBP9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 TMEM183BQ1AE95 376 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 WFDC10BQ8IUB3 73 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 TMEM183AQ8IXX5 376 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 CYB561D1Q8N8Q1 229 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 TMEM75Q8N9X5 138 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 NDFIP1Q9BT67 221 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 NAGKQ9UJ70 344 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 LY96Q9Y6Y9 160 aa9.21□□□□□ -0.94
SHKBP1-208ENST00000595726 MAP1LC3B2A6NCE7 125 aa9.2□□□□□ -0.94
SHKBP1-208ENST00000595726 KRTAP10-4P60372 401 aaPredicted RBP9.2□□□□□ -0.94
SHKBP1-208ENST00000595726 UBE2G2P60604 165 aa9.2□□□□□ -0.94
SHKBP1-208ENST00000595726 FLI1Q01543 452 aaPredicted RBP9.2□□□□□ -0.94
SHKBP1-208ENST00000595726 C8orf49Q96NF6 230 aa9.2□□□□□ -0.94
SHKBP1-208ENST00000595726 MAP1LC3BQ9GZQ8 125 aa9.2□□□□□ -0.94
SHKBP1-208ENST00000595726 PSG8Q9UQ74 426 aa9.2□□□□□ -0.94
SHKBP1-208ENST00000595726 ICOSQ9Y6W8 199 aa9.2□□□□□ -0.94
SHKBP1-208ENST00000595726 A0A0D9SG52 128 aa9.19□□□□□ -0.94
SHKBP1-208ENST00000595726 FAM74A7A6NL05 159 aa9.19□□□□□ -0.94
SHKBP1-208ENST00000595726 PAX4O43316 350 aa9.19□□□□□ -0.94
SHKBP1-208ENST00000595726 BCL2L11O43521 198 aa9.19□□□□□ -0.94
SHKBP1-208ENST00000595726 TYMSP04818 313 aa9.19□□□□□ -0.94
SHKBP1-208ENST00000595726 FHITP49789 147 aa9.19□□□□□ -0.94
SHKBP1-208ENST00000595726 ZNF80P51504 273 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms