RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 HSPB8Q9UJY1 196 aa7.82□□□□□ -1.16
VPS25-203ENST00000589520 TRAV25A0A0B4J276 109 aa7.81□□□□□ -1.16
VPS25-203ENST00000589520 BTF3P20290 206 aaKnown RBP7.81□□□□□ -1.16
VPS25-203ENST00000589520 MRPL51Q4U2R6 128 aaKnown RBP7.81□□□□□ -1.16
VPS25-203ENST00000589520 TCTEX1D4Q5JR98 221 aa7.81□□□□□ -1.16
VPS25-203ENST00000589520 FA2HQ7L5A8 372 aa7.81□□□□□ -1.16
VPS25-203ENST00000589520 OR9G4Q8NGQ1 327 aa7.81□□□□□ -1.16
VPS25-203ENST00000589520 AP5S1Q9NUS5 200 aa7.81□□□□□ -1.16
VPS25-203ENST00000589520 FN1P02751 2386 aaKnown RBP7.8□□□□□ -1.16
VPS25-203ENST00000589520 IGKV3-7A0A075B6H7 116 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 A0A0J9YX75 114 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 C20orf202A1L168 122 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 PRSS47A8MTI9 375 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 D6R8Y8 96 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 TCF21O43680 179 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 LEPROTL1O95214 131 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 PRB4P10163 310 aaPredicted RBP7.8□□□□□ -1.16
VPS25-203ENST00000589520 S100A4P26447 101 aaKnown RBP7.8□□□□□ -1.16
VPS25-203ENST00000589520 RNASE4P34096 147 aaKnown RBP7.8□□□□□ -1.16
VPS25-203ENST00000589520 KRTDAPP60985 99 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 SPANXN1Q5VSR9 72 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 TEX43Q6ZNM6 134 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 WFDC3Q8IUB2 231 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 AMN1Q8IY45 258 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 FAM19A2Q8N3H0 131 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 ZNF664Q8N3J9 261 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 DEFB125Q8N687 156 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 DUX5Q96PT3 197 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 SIGLEC8Q9NYZ4 499 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 C11orf21Q9P2W6 132 aa7.8□□□□□ -1.16
VPS25-203ENST00000589520 CRXO43186 299 aaPredicted RBP7.79□□□□□ -1.16
VPS25-203ENST00000589520 NDUFA7O95182 113 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 PPP1R17O96001 155 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 C3orf79P0CE67 100 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 SRD5A1P18405 259 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 CMC4P56277 68 aaPredicted RBP7.79□□□□□ -1.16
VPS25-203ENST00000589520 HILS1P60008 231 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 TDRG1Q3Y452 100 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 PSMG4Q5JS54 123 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 FAM159AQ6UWV7 190 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 KLHL30-AS1Q8NEE0 82 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 OR10AG1Q8NH19 301 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 MRAP2Q96G30 205 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 URB1-AS1Q96HZ7 61 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 TMEM70Q9BUB7 260 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 MAP1LC3AQ9H492 121 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 NXT2Q9NPJ8 142 aaKnown RBP7.79□□□□□ -1.16
VPS25-203ENST00000589520 SCRT2Q9NQ03 307 aa7.79□□□□□ -1.16
VPS25-203ENST00000589520 TSSC4Q9Y5U2 329 aaPredicted RBP7.79□□□□□ -1.16
VPS25-203ENST00000589520 C7orf71A4D174 169 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 LINC01546A6NGU7 62 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 ANXA2RQ3ZCQ2 193 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 PRR9Q5T870 116 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 CDPF1Q6NVV7 123 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 PET117Q6UWS5 81 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 RNF185Q96GF1 192 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 MDFIQ99750 246 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 C20orf144Q9BQM9 153 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 MAP1LC3CQ9BXW4 147 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 PHLDA3Q9Y5J5 127 aa7.78□□□□□ -1.16
VPS25-203ENST00000589520 IGHV1-24A0A0C4DH33 117 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 OR4C46A6NHA9 309 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 F6UB75 175 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 CSN3P07498 182 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 ZNF688P0C7X2 276 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 DDTP30046 118 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 CDKN1BP46527 198 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 SLURP1P55000 103 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 KHDC1LQ5JSQ8 128 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 DYNLRB2Q8TF09 96 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 SPAG8Q99932 426 aaPredicted RBP7.77□□□□□ -1.17
VPS25-203ENST00000589520 VAMP8Q9BV40 100 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 ESM1Q9NQ30 184 aa7.77□□□□□ -1.17
VPS25-203ENST00000589520 KIR2DL5BA0A0G2JN68 375 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 KIR2DL5BA0A0G2JPC4 375 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 LINC00587B1AMM8 73 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 K7EMI3 77 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 EDN2P20800 178 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 TFPI2P48307 235 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 DEFA6Q01524 100 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 FHL3Q13643 280 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 SPATA12Q7Z6I5 190 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 KIR2DL5AQ8N109 375 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 LINC01006Q8NI28 216 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 DLX4Q92988 240 aaPredicted RBP7.76□□□□□ -1.17
VPS25-203ENST00000589520 CLUHP3Q96NS8 147 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 DPH3P1Q9H4G8 78 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 MSRB1Q9NZV6 116 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 STAB1Q9NY15 2570 aa7.76□□□□□ -1.17
VPS25-203ENST00000589520 MUC21A0A0G2JKD1 596 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 MUC21A0A140T8X8 626 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 A8MTW9 85 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 SYS1-DBNDD2H3BUS1 97 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 H3BVH4 76 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 M0R381 172 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 CCL24O00175 119 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 NXPH4O95158 308 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 TNFRSF6BO95407 300 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 FOSL1P15407 271 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 IFI27P40305 119 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms