RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 KHDC3LQ587J8 217 aa9.39□□□□□ -0.91
DNMT1-213ENST00000587604 HYLS1Q96M11 299 aa9.39□□□□□ -0.91
DNMT1-213ENST00000587604 CCDC32Q9BV29 185 aa9.39□□□□□ -0.91
DNMT1-213ENST00000587604 NMES1Q9C002 83 aa9.39□□□□□ -0.91
DNMT1-213ENST00000587604 OTORQ9NRC9 128 aa9.39□□□□□ -0.91
DNMT1-213ENST00000587604 OR5AC2Q9NZP5 309 aa9.39□□□□□ -0.91
DNMT1-213ENST00000587604 H0YIZ8 118 aa9.38□□□□□ -0.91
DNMT1-213ENST00000587604 J3QL48 77 aa9.38□□□□□ -0.91
DNMT1-213ENST00000587604 SIX6O95475 246 aa9.38□□□□□ -0.91
DNMT1-213ENST00000587604 TYMSP04818 313 aa9.38□□□□□ -0.91
DNMT1-213ENST00000587604 OR10J3Q5JRS4 329 aa9.38□□□□□ -0.91
DNMT1-213ENST00000587604 CMTM2Q8TAZ6 248 aa9.38□□□□□ -0.91
DNMT1-213ENST00000587604 FAM30AQ9NZY2 134 aa9.38□□□□□ -0.91
DNMT1-213ENST00000587604 PGPA6NDG6 321 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 CIDEAO60543 219 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 CYCSP99999 105 aaKnown RBP9.37□□□□□ -0.91
DNMT1-213ENST00000587604 LRRC37A5PQ49AS3 106 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 FFAR4Q5NUL3 377 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 FAM74A1Q5RGS3 127 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 MZT2BQ6NZ67 158 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 ARL6IP6Q8N6S5 226 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 SLC25A29Q8N8R3 303 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 KCNS1Q96KK3 526 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 ATP5SQ99766 215 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 PRADC1Q9BSG0 188 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 Q9HAA7 133 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 SDF2L1Q9HCN8 221 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 MBD2Q9UBB5 411 aa9.37□□□□□ -0.91
DNMT1-213ENST00000587604 TRBV6-4A0A1B0GX49 114 aa9.36□□□□□ -0.91
DNMT1-213ENST00000587604 FBLL1A6NHQ2 334 aaKnown RBP9.36□□□□□ -0.91
DNMT1-213ENST00000587604 LELP1Q5T871 98 aa9.36□□□□□ -0.91
DNMT1-213ENST00000587604 GOLT1AQ6ZVE7 132 aa9.36□□□□□ -0.91
DNMT1-213ENST00000587604 TVP23CQ96ET8 276 aa9.36□□□□□ -0.91
DNMT1-213ENST00000587604 TREM1Q9NP99 234 aa9.36□□□□□ -0.91
DNMT1-213ENST00000587604 IGHV3-30P01768 117 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 IGHV3-33P01772 117 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 IGHV3-30-3P0DP02 117 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 IGHV3-30-5P0DP03 117 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 LAGE3Q14657 143 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 RHOHQ15669 191 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 ZNF876PQ49A33 203 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 SCGB1C1Q8TD33 95 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 ASB13Q8WXK3 278 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 TM2D2Q9BX73 214 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 RPH3ALQ9UNE2 315 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 DNAH8Q96JB1 4490 aa9.35□□□□□ -0.91
DNMT1-213ENST00000587604 TRAV8-1A0A0A6YYK1 113 aa9.34□□□□□ -0.91
DNMT1-213ENST00000587604 F6UZH7 168 aa9.34□□□□□ -0.91
DNMT1-213ENST00000587604 RS1O15537 224 aa9.34□□□□□ -0.91
DNMT1-213ENST00000587604 PLA2G1BP04054 148 aaKnown RBP9.34□□□□□ -0.91
DNMT1-213ENST00000587604 CFAP126Q5VTH2 177 aa9.34□□□□□ -0.91
DNMT1-213ENST00000587604 PQLC2Q6ZP29 291 aa9.34□□□□□ -0.91
DNMT1-213ENST00000587604 GTSF1LQ9H1H1 148 aa9.34□□□□□ -0.91
DNMT1-213ENST00000587604 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.92
DNMT1-213ENST00000587604 ASAH1Q13510 395 aa9.33□□□□□ -0.92
DNMT1-213ENST00000587604 DPPA3Q6W0C5 159 aa9.33□□□□□ -0.92
DNMT1-213ENST00000587604 Q6ZSA8 131 aa9.33□□□□□ -0.92
DNMT1-213ENST00000587604 ATP6V0E2Q8NHE4 81 aa9.33□□□□□ -0.92
DNMT1-213ENST00000587604 HSPB11Q9Y547 144 aa9.33□□□□□ -0.92
DNMT1-213ENST00000587604 IGHV3-73A0A0B4J1V6 119 aa9.32□□□□□ -0.92
DNMT1-213ENST00000587604 KRTAP29-1A8MX34 341 aaPredicted RBP9.32□□□□□ -0.92
DNMT1-213ENST00000587604 PPP1R1CQ8WVI7 109 aa9.32□□□□□ -0.92
DNMT1-213ENST00000587604 PTH2Q96A98 100 aa9.32□□□□□ -0.92
DNMT1-213ENST00000587604 NDUFA13Q9P0J0 144 aa9.32□□□□□ -0.92
DNMT1-213ENST00000587604 A0A1W2PPV4 95 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 TAAR5O14804 337 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 MGST1P10620 155 aaKnown RBP9.31□□□□□ -0.92
DNMT1-213ENST00000587604 H2BFSP57053 126 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 GNG5P63218 68 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 WFDC2Q14508 124 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 ACOT6Q3I5F7 207 aaPredicted RBP9.31□□□□□ -0.92
DNMT1-213ENST00000587604 ENKURQ8TC29 256 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 DEFB104AQ8WTQ1 72 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 C9orf85Q96MD7 179 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 NDFIP1Q9BT67 221 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 SMIM3Q9BZL3 60 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 SH3BGRL3Q9H299 93 aa9.31□□□□□ -0.92
DNMT1-213ENST00000587604 TRAV8-3A0A0A6YYJ7 113 aa9.3□□□□□ -0.92
DNMT1-213ENST00000587604 SERTM2A0A1B0GWG4 89 aa9.3□□□□□ -0.92
DNMT1-213ENST00000587604 PET100P0DJ07 73 aa9.3□□□□□ -0.92
DNMT1-213ENST00000587604 RPL12P30050 165 aaKnown RBP9.3□□□□□ -0.92
DNMT1-213ENST00000587604 ZNF80P51504 273 aaPredicted RBP9.3□□□□□ -0.92
DNMT1-213ENST00000587604 LINC00299Q6ZSB3 139 aa9.3□□□□□ -0.92
DNMT1-213ENST00000587604 LINC00528Q8N1L1 170 aa9.3□□□□□ -0.92
DNMT1-213ENST00000587604 SGK494Q96LW2 274 aa9.3□□□□□ -0.92
DNMT1-213ENST00000587604 C11orf21Q9P2W6 132 aa9.3□□□□□ -0.92
DNMT1-213ENST00000587604 PGPEP1LA6NFU8 196 aa9.29□□□□□ -0.92
DNMT1-213ENST00000587604 MPC2O95563 127 aa9.29□□□□□ -0.92
DNMT1-213ENST00000587604 ZNF506Q5JVG8 444 aa9.29□□□□□ -0.92
DNMT1-213ENST00000587604 INMT-MINDY4F8WBC2 141 aa9.28□□□□□ -0.92
DNMT1-213ENST00000587604 GCGP01275 180 aa9.28□□□□□ -0.92
DNMT1-213ENST00000587604 RAB2AP61019 212 aa9.28□□□□□ -0.92
DNMT1-213ENST00000587604 TOR2AQ5JU69 321 aa9.28□□□□□ -0.92
DNMT1-213ENST00000587604 Q8N3U1 123 aa9.28□□□□□ -0.92
DNMT1-213ENST00000587604 S100ZQ8WXG8 99 aa9.28□□□□□ -0.92
DNMT1-213ENST00000587604 WFDC1Q9HC57 220 aa9.28□□□□□ -0.92
DNMT1-213ENST00000587604 K7EQM0 130 aa9.27□□□□□ -0.93
DNMT1-213ENST00000587604 LECT2O14960 151 aa9.27□□□□□ -0.93
DNMT1-213ENST00000587604 HMGB3O15347 200 aaKnown RBP9.27□□□□□ -0.93
DNMT1-213ENST00000587604 TCRAP04437 139 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms