RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SDF2L1Q9HCN8 221 aa12.05□□□□□ -0.48
MKS1-209ENST00000580127 OTORQ9NRC9 128 aa12.05□□□□□ -0.48
MKS1-209ENST00000580127 NDUFA13Q9P0J0 144 aa12.05□□□□□ -0.48
MKS1-209ENST00000580127 PGPA6NDG6 321 aa12.04□□□□□ -0.48
MKS1-209ENST00000580127 FBLL1A6NHQ2 334 aaKnown RBP12.04□□□□□ -0.48
MKS1-209ENST00000580127 IBA57-AS1B1ANH7 110 aa12.04□□□□□ -0.48
MKS1-209ENST00000580127 GNRH2O43555 120 aa12.04□□□□□ -0.48
MKS1-209ENST00000580127 OR10J3Q5JRS4 329 aa12.04□□□□□ -0.48
MKS1-209ENST00000580127 FFAR4Q5NUL3 377 aa12.04□□□□□ -0.48
MKS1-209ENST00000580127 TM2D2Q9BX73 214 aa12.04□□□□□ -0.48
MKS1-209ENST00000580127 SRRM2Q9UQ35 2752 aaKnown RBP12.03□□□□□ -0.48
MKS1-209ENST00000580127 FLG2Q5D862 2391 aaPredicted RBP12.03□□□□□ -0.48
MKS1-209ENST00000580127 J3QL48 77 aa12.03□□□□□ -0.48
MKS1-209ENST00000580127 LRRC37A5PQ49AS3 106 aa12.03□□□□□ -0.48
MKS1-209ENST00000580127 MBD2Q9UBB5 411 aa12.03□□□□□ -0.48
MKS1-209ENST00000580127 IGHV3-16A0A0C4DH30 117 aa12.02□□□□□ -0.49
MKS1-209ENST00000580127 C1QBP02746 253 aa12.02□□□□□ -0.49
MKS1-209ENST00000580127 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.49
MKS1-209ENST00000580127 ASB13Q8WXK3 278 aa12.02□□□□□ -0.49
MKS1-209ENST00000580127 NDFIP1Q9BT67 221 aa12.02□□□□□ -0.49
MKS1-209ENST00000580127 TREM1Q9NP99 234 aa12.02□□□□□ -0.49
MKS1-209ENST00000580127 RPH3ALQ9UNE2 315 aa12.02□□□□□ -0.49
MKS1-209ENST00000580127 A0A1W2PPV4 95 aa12.01□□□□□ -0.49
MKS1-209ENST00000580127 LRCOL1A6NCL2 159 aa12.01□□□□□ -0.49
MKS1-209ENST00000580127 PLA2G1BP04054 148 aaKnown RBP12.01□□□□□ -0.49
MKS1-209ENST00000580127 PET100P0DJ07 73 aa12.01□□□□□ -0.49
MKS1-209ENST00000580127 Q8N814 137 aa12.01□□□□□ -0.49
MKS1-209ENST00000580127 Q9HAA7 133 aa12.01□□□□□ -0.49
MKS1-209ENST00000580127 OR5AC2Q9NZP5 309 aa12.01□□□□□ -0.49
MKS1-209ENST00000580127 HERC1Q15751 4861 aa12.01□□□□□ -0.49
MKS1-209ENST00000580127 LOC100131303A0A0U1RQF7 123 aa12□□□□□ -0.49
MKS1-209ENST00000580127 TRBV6-4A0A1B0GX49 114 aa12□□□□□ -0.49
MKS1-209ENST00000580127 SIX6O95475 246 aa12□□□□□ -0.49
MKS1-209ENST00000580127 RHOHQ15669 191 aa12□□□□□ -0.49
MKS1-209ENST00000580127 ZNF876PQ49A33 203 aa12□□□□□ -0.49
MKS1-209ENST00000580127 PQLC2Q6ZP29 291 aa12□□□□□ -0.49
MKS1-209ENST00000580127 GOLT1AQ6ZVE7 132 aa12□□□□□ -0.49
MKS1-209ENST00000580127 ENKURQ8TC29 256 aa12□□□□□ -0.49
MKS1-209ENST00000580127 K7EQM0 130 aa11.99□□□□□ -0.49
MKS1-209ENST00000580127 ACOT6Q3I5F7 207 aaPredicted RBP11.99□□□□□ -0.49
MKS1-209ENST00000580127 LELP1Q5T871 98 aa11.99□□□□□ -0.49
MKS1-209ENST00000580127 SLC25A29Q8N8R3 303 aa11.99□□□□□ -0.49
MKS1-209ENST00000580127 SERTM2A0A1B0GWG4 89 aa11.98□□□□□ -0.49
MKS1-209ENST00000580127 TAAR5O14804 337 aa11.98□□□□□ -0.49
MKS1-209ENST00000580127 TYMSP04818 313 aa11.98□□□□□ -0.49
MKS1-209ENST00000580127 ASAH1Q13510 395 aa11.98□□□□□ -0.49
MKS1-209ENST00000580127 LAGE3Q14657 143 aa11.98□□□□□ -0.49
MKS1-209ENST00000580127 LINC00299Q6ZSB3 139 aa11.98□□□□□ -0.49
MKS1-209ENST00000580127 S100ZQ8WXG8 99 aa11.98□□□□□ -0.49
MKS1-209ENST00000580127 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
MKS1-209ENST00000580127 IGHV3-30P01768 117 aa11.97□□□□□ -0.49
MKS1-209ENST00000580127 IGHV3-33P01772 117 aa11.97□□□□□ -0.49
MKS1-209ENST00000580127 IGHV3-30-3P0DP02 117 aa11.97□□□□□ -0.49
MKS1-209ENST00000580127 IGHV3-30-5P0DP03 117 aa11.97□□□□□ -0.49
MKS1-209ENST00000580127 TOR2AQ5JU69 321 aa11.97□□□□□ -0.49
MKS1-209ENST00000580127 ATP6V0E2Q8NHE4 81 aa11.97□□□□□ -0.49
MKS1-209ENST00000580127 HSPB11Q9Y547 144 aa11.97□□□□□ -0.49
MKS1-209ENST00000580127 TRAV8-3A0A0A6YYJ7 113 aa11.96□□□□□ -0.49
MKS1-209ENST00000580127 H0YIZ8 118 aa11.96□□□□□ -0.49
MKS1-209ENST00000580127 MGST1P10620 155 aaKnown RBP11.96□□□□□ -0.49
MKS1-209ENST00000580127 PPP1R1CQ8WVI7 109 aa11.96□□□□□ -0.49
MKS1-209ENST00000580127 F6UZH7 168 aa11.95□□□□□ -0.5
MKS1-209ENST00000580127 RS1O15537 224 aa11.95□□□□□ -0.5
MKS1-209ENST00000580127 RPL12P30050 165 aaKnown RBP11.95□□□□□ -0.5
MKS1-209ENST00000580127 HAMPP81172 84 aa11.95□□□□□ -0.5
MKS1-209ENST00000580127 CFAP126Q5VTH2 177 aa11.95□□□□□ -0.5
MKS1-209ENST00000580127 COX11Q9Y6N1 276 aa11.95□□□□□ -0.5
MKS1-209ENST00000580127 ZFP69Q49AA0 526 aa11.94□□□□□ -0.5
MKS1-209ENST00000580127 PTH2Q96A98 100 aa11.94□□□□□ -0.5
MKS1-209ENST00000580127 TRAV8-1A0A0A6YYK1 113 aa11.93□□□□□ -0.5
MKS1-209ENST00000580127 SMIM3Q9BZL3 60 aa11.93□□□□□ -0.5
MKS1-209ENST00000580127 A0A087WWC5 75 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 IGHV3-73A0A0B4J1V6 119 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 INMT-MINDY4F8WBC2 141 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 SSNA1O43805 119 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 MPC2O95563 127 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 SEC11BP0C7V7 166 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 OR10G9Q8NGN4 311 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 OR10G7Q8NGN6 311 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 DEFB104AQ8WTQ1 72 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 RMI2Q96E14 147 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 TVP23CQ96ET8 276 aa11.92□□□□□ -0.5
MKS1-209ENST00000580127 GGTLC3B5MD39 225 aa11.91□□□□□ -0.5
MKS1-209ENST00000580127 H2BFSP57053 126 aa11.91□□□□□ -0.5
MKS1-209ENST00000580127 SMUG1Q53HV7 270 aa11.91□□□□□ -0.5
MKS1-209ENST00000580127 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
MKS1-209ENST00000580127 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
MKS1-209ENST00000580127 FAM30AQ9NZY2 134 aa11.91□□□□□ -0.5
MKS1-209ENST00000580127 GCGP01275 180 aa11.9□□□□□ -0.5
MKS1-209ENST00000580127 FGF8P55075 233 aaPredicted RBP11.9□□□□□ -0.5
MKS1-209ENST00000580127 URGCP-MRPS24S4R325 110 aa11.9□□□□□ -0.5
MKS1-209ENST00000580127 A8MWV9 139 aa11.89□□□□□ -0.51
MKS1-209ENST00000580127 TCRAP04437 139 aa11.89□□□□□ -0.51
MKS1-209ENST00000580127 S100A4P26447 101 aaKnown RBP11.89□□□□□ -0.51
MKS1-209ENST00000580127 GNG5P63218 68 aa11.89□□□□□ -0.51
MKS1-209ENST00000580127 ZNF506Q5JVG8 444 aa11.89□□□□□ -0.51
MKS1-209ENST00000580127 ZFP2Q6ZN57 461 aa11.89□□□□□ -0.51
MKS1-209ENST00000580127 SGK494Q96LW2 274 aa11.89□□□□□ -0.51
MKS1-209ENST00000580127 C9orf85Q96MD7 179 aa11.89□□□□□ -0.51
MKS1-209ENST00000580127 PSG8Q9UQ74 426 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms