RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 LINC01619G3V211 115 aa8.46□□□□□ -1.06
SEC22B-201ENST00000578049 TRAV26-2A0A0B4J265 109 aa8.46□□□□□ -1.06
SEC22B-201ENST00000578049 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.06
SEC22B-201ENST00000578049 ANKRD39Q53RE8 183 aa8.46□□□□□ -1.06
SEC22B-201ENST00000578049 C11orf1Q9H5F2 150 aa8.46□□□□□ -1.06
SEC22B-201ENST00000578049 COL6A6A6NMZ7 2263 aa8.46□□□□□ -1.06
SEC22B-201ENST00000578049 WDR81Q562E7 1941 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 NUPR1O60356 82 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 G3V318 75 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 FAM167A-AS1Q96KT0 104 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 DSCR8Q96T75 97 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 H3BT86 120 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 TAX1BP3O14907 124 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 LHBP01229 141 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 ZNRF2Q8NHG8 242 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 UBE2E2Q96LR5 201 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 ATOX1O00244 68 aa8.45□□□□□ -1.06
SEC22B-201ENST00000578049 TMEM126AQ9H061 195 aa8.44□□□□□ -1.06
SEC22B-201ENST00000578049 CRLF1O75462 422 aa8.44□□□□□ -1.06
SEC22B-201ENST00000578049 DYNAPQ8N1N2 210 aa8.44□□□□□ -1.06
SEC22B-201ENST00000578049 IGKV1-17P01599 117 aa8.44□□□□□ -1.06
SEC22B-201ENST00000578049 CTRLP40313 264 aa8.44□□□□□ -1.06
SEC22B-201ENST00000578049 HAMPP81172 84 aa8.44□□□□□ -1.06
SEC22B-201ENST00000578049 RNASE8Q8TDE3 154 aaKnown RBP8.44□□□□□ -1.06
SEC22B-201ENST00000578049 TIMM17AQ99595 171 aa8.44□□□□□ -1.06
SEC22B-201ENST00000578049 ZNF561-AS1K7EIQ3 104 aa8.44□□□□□ -1.06
SEC22B-201ENST00000578049 NPBQ8NG41 125 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 KNCNA6PVL3 124 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 I3L2K1 104 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 YLPM1P49750 1951 aaKnown RBP8.43□□□□□ -1.06
SEC22B-201ENST00000578049 CRYBA4P53673 196 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 Q71RC1 249 aaPredicted RBP8.43□□□□□ -1.06
SEC22B-201ENST00000578049 PIFOQ8TCI5 191 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 FOXE3Q13461 319 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 DUX4L9Q6RFH8 374 aaPredicted RBP8.43□□□□□ -1.06
SEC22B-201ENST00000578049 LINC01620Q4KN68 170 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 TCTEX1D4Q5JR98 221 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 PATE2Q6UY27 113 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 ORMDL1Q9P0S3 153 aa8.43□□□□□ -1.06
SEC22B-201ENST00000578049 E9PLD3 99 aa8.42□□□□□ -1.06
SEC22B-201ENST00000578049 ATP5G1P05496 136 aa8.42□□□□□ -1.06
SEC22B-201ENST00000578049 PFN2P35080 140 aa8.42□□□□□ -1.06
SEC22B-201ENST00000578049 KLK9Q9UKQ9 250 aa8.42□□□□□ -1.06
SEC22B-201ENST00000578049 XCL2Q9UBD3 114 aa8.42□□□□□ -1.06
SEC22B-201ENST00000578049 B5MCH6 92 aa8.42□□□□□ -1.06
SEC22B-201ENST00000578049 BAALC-AS2P0C853 105 aa8.42□□□□□ -1.06
SEC22B-201ENST00000578049 K7EIM0 57 aa8.42□□□□□ -1.06
SEC22B-201ENST00000578049 IGLV11-55A0A075B6I3 123 aa8.41□□□□□ -1.06
SEC22B-201ENST00000578049 RPL35AP18077 110 aaKnown RBP8.41□□□□□ -1.06
SEC22B-201ENST00000578049 CR1LQ2VPA4 569 aa8.41□□□□□ -1.06
SEC22B-201ENST00000578049 TDRG1Q3Y452 100 aa8.41□□□□□ -1.06
SEC22B-201ENST00000578049 DEFB104AQ8WTQ1 72 aa8.41□□□□□ -1.06
SEC22B-201ENST00000578049 CFHR4Q92496 578 aa8.41□□□□□ -1.06
SEC22B-201ENST00000578049 DEFB130BP0DP73 79 aa8.41□□□□□ -1.06
SEC22B-201ENST00000578049 DEFB130AP0DP74 79 aa8.41□□□□□ -1.06
SEC22B-201ENST00000578049 FAM215AQ9Y5M1 114 aa8.41□□□□□ -1.06
SEC22B-201ENST00000578049 PCNX1Q96RV3 2341 aa8.41□□□□□ -1.06
SEC22B-201ENST00000578049 FGF23Q9GZV9 251 aaPredicted RBP8.41□□□□□ -1.06
SEC22B-201ENST00000578049 FOXI1Q12951 378 aa8.41□□□□□ -1.06
SEC22B-201ENST00000578049 NSUN5P1Q3KNT7 163 aa8.4□□□□□ -1.06
SEC22B-201ENST00000578049 SMIM20Q8N5G0 67 aa8.4□□□□□ -1.06
SEC22B-201ENST00000578049 A0A0B4J2C4 111 aa8.4□□□□□ -1.06
SEC22B-201ENST00000578049 C11orf44Q8N8P7 122 aa8.4□□□□□ -1.06
SEC22B-201ENST00000578049 K7ENP7 123 aa8.4□□□□□ -1.06
SEC22B-201ENST00000578049 UNQ6494/PRO21346Q6UXR6 183 aa8.4□□□□□ -1.06
SEC22B-201ENST00000578049 NKAPP1Q8N9T2 125 aa8.4□□□□□ -1.06
SEC22B-201ENST00000578049 G3V4G9 280 aa8.4□□□□□ -1.07
SEC22B-201ENST00000578049 FXYD2P54710 66 aa8.4□□□□□ -1.07
SEC22B-201ENST00000578049 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.07
SEC22B-201ENST00000578049 SH2D6Q7Z4S9 175 aa8.4□□□□□ -1.07
SEC22B-201ENST00000578049 C19orf71A6NCJ1 209 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 CRYGCP07315 174 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 P0C879 139 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 Q9H8V8 135 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 DIAPH2-AS1Q14236 149 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 GTSF1Q8WW33 167 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 A4D1N5 150 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 C2orf70A6NJV1 201 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 LY6HO94772 140 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 A0A1B0GXF2 115 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 RMI2Q96E14 147 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 PLCE1Q9P212 2302 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 C11orf86A6NJI1 115 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 DAD1P61803 113 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 C9orf47Q6ZRZ4 202 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 GTF3C1Q12789 2109 aa8.39□□□□□ -1.07
SEC22B-201ENST00000578049 WI2-2373I1.2A0A1W2PRP0 233 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 BUB3O43684 328 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 EML6Q6ZMW3 1958 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 IGFL2Q6UWQ7 119 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 LINC00173Q6ZV60 143 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 ICOSQ9Y6W8 199 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 TRBV10-2A0A0K0K1G8 114 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 TOMM6Q96B49 74 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 JMJD7-PLA2G4BH0Y9G9 81 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 CTSZQ9UBR2 303 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 J3KT08 172 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 ODF1Q14990 250 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms