RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ANKRD30AQ9BXX3 1397 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.12□□□□□ -2.39
TOP2A-202ENST00000577541 TMEM30CPA0ZSE6 113 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 BBIP1A8MTZ0 92 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 UQCRQO14949 82 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 TNFSF15O95150 251 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 ADCYAP1P18509 176 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 CAV3P56539 151 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 RPL37P61927 97 aaKnown RBP0.12□□□□□ -2.39
TOP2A-202ENST00000577541 HSD17B12Q53GQ0 312 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 TMEM244Q5VVB8 128 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 TAC4Q86UU9 113 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 ATOH7Q8N100 152 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 BANF2Q9H503 90 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 JPT1Q9UK76 154 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 DNAJC15Q9Y5T4 150 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 SSPOA2VEC9 5147 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 USP24Q9UPU5 2620 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 BCORL1Q5H9F3 1711 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 IGHV1-24A0A0C4DH33 117 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 A0A1B0GX51 115 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 TMEM189A5PLL7 270 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 ARL5CA6NH57 179 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 C9JAW5 83 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 FXYD1O00168 92 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 ARPC5O15511 151 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 FAM107AO95990 144 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 GYPBP06028 91 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 EVI2AP22794 236 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 PCBD1P61457 104 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 Q6ZS92 163 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 C3orf62Q6ZUJ4 267 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 OR8I2Q8N0Y5 310 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 OR4S1Q8NGB4 309 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 AIF1LQ9BQI0 150 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 METTL1Q9UBP6 276 aaKnown RBP0.11□□□□□ -2.39
TOP2A-202ENST00000577541 HIGD1AQ9Y241 93 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 LSM2Q9Y333 95 aaKnown RBP0.11□□□□□ -2.39
TOP2A-202ENST00000577541 CASZ1Q86V15 1759 aa0.11□□□□□ -2.39
TOP2A-202ENST00000577541 DSTQ03001 7570 aaKnown RBP0.11□□□□□ -2.39
TOP2A-202ENST00000577541 ABCA1O95477 2261 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 TRAV17A0A0B4J275 112 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 CXorf51AA0A1B0GTR3 108 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 TSTD3H0UI37 97 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 DEGS1O15121 323 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 TPST1O60507 370 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 SULT1C4O75897 302 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 DPM2O94777 84 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 PAEPP09466 180 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 CKS2P33552 79 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 SPINK7P58062 85 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 DNAJB13P59910 316 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 TMEM91Q6ZNR0 172 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 OR8J3Q8NGG0 315 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 SMIM7Q9BQ49 75 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 MRPL35Q9NZE8 188 aaKnown RBP0.1□□□□□ -2.39
TOP2A-202ENST00000577541 MYH1P12882 1939 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 HELZP42694 1942 aaKnown RBP0.1□□□□□ -2.39
TOP2A-202ENST00000577541 ABCA4P78363 2273 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 ERCC6Q03468 1493 aa0.1□□□□□ -2.39
TOP2A-202ENST00000577541 A0A087WTM6 91 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 A0A0G2JMM0 328 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 FAM236AA0A1B0GUQ0 79 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 FAM236BA0A1B0GV22 79 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 IFITM5A6NNB3 132 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 PITX3O75364 302 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 ETV6P41212 452 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 AKR1D1P51857 326 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 RPS28P62857 69 aaKnown RBP0.09□□□□□ -2.4
TOP2A-202ENST00000577541 RHOHQ15669 191 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 CLLU1Q5K131 121 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 C10orf99Q6UWK7 81 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 AKAP14Q86UN6 197 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 DMAC1Q96GE9 116 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 AP1S3Q96PC3 154 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 SLC35B3Q9H1N7 401 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 PLAC8Q9NZF1 115 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 DLEC1Q9Y238 1755 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 JMJD1CQ15652 2540 aa0.09□□□□□ -2.4
TOP2A-202ENST00000577541 ESPL1Q14674 2120 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 LOC105371267A0A1B0GV96 52 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 OR2H2O95918 312 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 CCKP06307 115 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 KDELR1P24390 212 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 CMPK1P30085 196 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 SRP9P49458 86 aaKnown RBP0.08□□□□□ -2.4
TOP2A-202ENST00000577541 NPC2P61916 151 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 CCSMST1Q4G0I0 132 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 IDO2Q6ZQW0 420 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 SLC25A26Q70HW3 274 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 SNX29P2Q8IUI4 249 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 TCTE3Q8IZS6 198 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 C19orf12Q9NSK7 152 aa0.08□□□□□ -2.4
TOP2A-202ENST00000577541 AFDNP55196 1824 aaKnown RBP0.08□□□□□ -2.4
TOP2A-202ENST00000577541 ARHGEF10O15013 1369 aa0.07□□□□□ -2.4
TOP2A-202ENST00000577541 BLMP54132 1417 aaPredicted RBP0.07□□□□□ -2.4
TOP2A-202ENST00000577541 CACNA1EQ15878 2313 aa0.07□□□□□ -2.4
TOP2A-202ENST00000577541 A0A096LNT2 108 aa0.07□□□□□ -2.4
TOP2A-202ENST00000577541 HIGD1CA8MV81 97 aa0.07□□□□□ -2.4
TOP2A-202ENST00000577541 PFDN1O60925 122 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms