RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 M0R2P5 195 aa10.72□□□□□ -0.69
SF3B3-215ENST00000577085 IFNA7P01567 189 aa10.72□□□□□ -0.69
SF3B3-215ENST00000577085 FLI1Q01543 452 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-215ENST00000577085 FHL2Q14192 279 aa10.72□□□□□ -0.69
SF3B3-215ENST00000577085 OR4C5Q8NGB2 326 aa10.72□□□□□ -0.69
SF3B3-215ENST00000577085 SUN5Q8TC36 379 aa10.72□□□□□ -0.69
SF3B3-215ENST00000577085 TVP23CQ96ET8 276 aa10.72□□□□□ -0.69
SF3B3-215ENST00000577085 PSG8Q9UQ74 426 aa10.72□□□□□ -0.69
SF3B3-215ENST00000577085 FAT2Q9NYQ8 4349 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 IGHV3-16A0A0C4DH30 117 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 A0A1W2PPQ1 181 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 A0A1W2PRE2 83 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 GGTLC3B5MD39 225 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 GCGP01275 180 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 TYMSP04818 313 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 SFTA3P0C7M3 94 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 SRIP30626 198 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 PPT1P50897 306 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 SMUG1Q53HV7 270 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 ZNF479Q96JC4 524 aa10.71□□□□□ -0.69
SF3B3-215ENST00000577085 TRAV4A0A0B4J268 109 aa10.7□□□□□ -0.7
SF3B3-215ENST00000577085 ORM1P02763 201 aa10.7□□□□□ -0.7
SF3B3-215ENST00000577085 MED14OSP0DP75 135 aa10.7□□□□□ -0.7
SF3B3-215ENST00000577085 UBE2G2P60604 165 aa10.7□□□□□ -0.7
SF3B3-215ENST00000577085 TNP2Q05952 138 aa10.7□□□□□ -0.7
SF3B3-215ENST00000577085 SAPCD1Q5SSQ6 148 aa10.7□□□□□ -0.7
SF3B3-215ENST00000577085 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
SF3B3-215ENST00000577085 TMEM75Q8N9X5 138 aa10.7□□□□□ -0.7
SF3B3-215ENST00000577085 C9JCJ5 164 aa10.69□□□□□ -0.7
SF3B3-215ENST00000577085 SIVA1O15304 175 aa10.69□□□□□ -0.7
SF3B3-215ENST00000577085 NXPH4O95158 308 aa10.69□□□□□ -0.7
SF3B3-215ENST00000577085 PFN1P07737 140 aaKnown RBP10.69□□□□□ -0.7
SF3B3-215ENST00000577085 TXNDC17Q9BRA2 123 aa10.69□□□□□ -0.7
SF3B3-215ENST00000577085 NKX6-2Q9C056 277 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-215ENST00000577085 GYPEP15421 78 aa10.68□□□□□ -0.7
SF3B3-215ENST00000577085 FGF8P55075 233 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-215ENST00000577085 STOML3Q8TAV4 291 aa10.68□□□□□ -0.7
SF3B3-215ENST00000577085 MAP1LC3B2A6NCE7 125 aa10.67□□□□□ -0.7
SF3B3-215ENST00000577085 SMLR1H3BR10 107 aa10.67□□□□□ -0.7
SF3B3-215ENST00000577085 K7EQD1 137 aa10.67□□□□□ -0.7
SF3B3-215ENST00000577085 BTF3P20290 206 aaKnown RBP10.67□□□□□ -0.7
SF3B3-215ENST00000577085 ZNF80P51504 273 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-215ENST00000577085 ZNF726P1Q15940 193 aa10.67□□□□□ -0.7
SF3B3-215ENST00000577085 ZNF876PQ49A33 203 aa10.67□□□□□ -0.7
SF3B3-215ENST00000577085 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
SF3B3-215ENST00000577085 MAP1LC3BQ9GZQ8 125 aa10.67□□□□□ -0.7
SF3B3-215ENST00000577085 TRAV9-2A0A087WT02 112 aa10.66□□□□□ -0.7
SF3B3-215ENST00000577085 TRAV34A0A0B4J273 112 aa10.66□□□□□ -0.7
SF3B3-215ENST00000577085 C16orf90A8MZG2 172 aa10.66□□□□□ -0.7
SF3B3-215ENST00000577085 PEX7O00628 323 aa10.66□□□□□ -0.7
SF3B3-215ENST00000577085 IGLV2-11P01706 119 aa10.66□□□□□ -0.7
SF3B3-215ENST00000577085 NHLRC2Q8NBF2 726 aa10.66□□□□□ -0.7
SF3B3-215ENST00000577085 HIST1H2BAQ96A08 127 aa10.66□□□□□ -0.7
SF3B3-215ENST00000577085 KRTAP1-5Q9BYS1 174 aa10.66□□□□□ -0.7
SF3B3-215ENST00000577085 DNAH17Q9UFH2 4485 aa10.66□□□□□ -0.7
SF3B3-215ENST00000577085 MUC4Q99102 2169 aa10.66□□□□□ -0.7
SF3B3-215ENST00000577085 G3V3Q6 166 aa10.65□□□□□ -0.7
SF3B3-215ENST00000577085 S100A4P26447 101 aaKnown RBP10.65□□□□□ -0.7
SF3B3-215ENST00000577085 SH2D6Q7Z4S9 175 aa10.65□□□□□ -0.7
SF3B3-215ENST00000577085 ZNF575Q86XF7 245 aa10.65□□□□□ -0.7
SF3B3-215ENST00000577085 LINC00479Q96M42 142 aa10.65□□□□□ -0.7
SF3B3-215ENST00000577085 ARL2-SNX15V9GYD0 113 aa10.65□□□□□ -0.7
SF3B3-215ENST00000577085 KANTRA0A1W2PQU2 76 aa10.64□□□□□ -0.71
SF3B3-215ENST00000577085 FAM74A7A6NL05 159 aa10.64□□□□□ -0.71
SF3B3-215ENST00000577085 UBE2G1P62253 170 aa10.64□□□□□ -0.71
SF3B3-215ENST00000577085 ZNF345Q14585 488 aa10.64□□□□□ -0.71
SF3B3-215ENST00000577085 CST9LP1Q5W188 147 aa10.64□□□□□ -0.71
SF3B3-215ENST00000577085 CYTL1Q9NRR1 136 aa10.64□□□□□ -0.71
SF3B3-215ENST00000577085 LY96Q9Y6Y9 160 aa10.64□□□□□ -0.71
SF3B3-215ENST00000577085 PKHD1P08F94 4074 aa10.64□□□□□ -0.71
SF3B3-215ENST00000577085 FABP5P3A8MUU1 101 aa10.63□□□□□ -0.71
SF3B3-215ENST00000577085 CIDEAO60543 219 aa10.63□□□□□ -0.71
SF3B3-215ENST00000577085 LINC00315P59091 139 aa10.63□□□□□ -0.71
SF3B3-215ENST00000577085 Q86TA4 180 aa10.63□□□□□ -0.71
SF3B3-215ENST00000577085 KCNRGQ8N5I3 272 aa10.63□□□□□ -0.71
SF3B3-215ENST00000577085 PRADC1Q9BSG0 188 aa10.63□□□□□ -0.71
SF3B3-215ENST00000577085 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
SF3B3-215ENST00000577085 PKD1P98161 4303 aa10.62□□□□□ -0.71
SF3B3-215ENST00000577085 A0A0D9SG52 128 aa10.62□□□□□ -0.71
SF3B3-215ENST00000577085 EVI2AP22794 236 aa10.62□□□□□ -0.71
SF3B3-215ENST00000577085 ASIPP42127 132 aa10.62□□□□□ -0.71
SF3B3-215ENST00000577085 FMC1Q96HJ9 113 aa10.62□□□□□ -0.71
SF3B3-215ENST00000577085 TCEAL7Q9BRU2 100 aa10.62□□□□□ -0.71
SF3B3-215ENST00000577085 ZNF471Q9BX82 626 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-215ENST00000577085 IGHV3-73A0A0B4J1V6 119 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 HMSDA8MTL9 139 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 UMAD1C9J7I0 102 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 PFDN1O60925 122 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 GATA1P15976 413 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-215ENST00000577085 EIF5AP63241 154 aaKnown RBP10.61□□□□□ -0.71
SF3B3-215ENST00000577085 RHOHQ15669 191 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 CFAP126Q5VTH2 177 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 SPATA12Q7Z6I5 190 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 NFE4Q86UQ8 179 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 FAM213BQ8TBF2 198 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 SFT2D1Q8WV19 159 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 C9orf85Q96MD7 179 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 ZFP30Q9Y2G7 519 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 HERC2O95714 4834 aa10.61□□□□□ -0.71
SF3B3-215ENST00000577085 KIAA1109Q2LD37 5005 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms