RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 TEX48A0A1B0GUV7 120 aa10.41□□□□□ -0.74
NPLOC4-218ENST00000574964 DAZAP1Q96EP5 407 aaKnown RBP10.41□□□□□ -0.74
NPLOC4-218ENST00000574964 SMIM12Q96EX1 92 aa10.41□□□□□ -0.74
NPLOC4-218ENST00000574964 SMIM7Q9BQ49 75 aa10.41□□□□□ -0.74
NPLOC4-218ENST00000574964 BIN3Q9NQY0 253 aa10.41□□□□□ -0.74
NPLOC4-218ENST00000574964 GSN-AS1Q9NRJ2 163 aa10.41□□□□□ -0.74
NPLOC4-218ENST00000574964 ZNF727A8MUV8 499 aa10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 C9JCJ5 164 aa10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 M0R036 132 aa10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 GNRH2O43555 120 aa10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 CRIP1P50238 77 aa10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 TDRG1Q3Y452 100 aa10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 IBA57Q5T440 356 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 MLST8Q9BVC4 326 aa10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 NOP10Q9NPE3 64 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 DKK2Q9UBU2 259 aa10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 CELA1Q9UNI1 258 aa10.4□□□□□ -0.74
NPLOC4-218ENST00000574964 PGPEP1LA6NFU8 196 aa10.39□□□□□ -0.75
NPLOC4-218ENST00000574964 LYRM9A8MSI8 78 aa10.39□□□□□ -0.75
NPLOC4-218ENST00000574964 B4DEV8 164 aa10.39□□□□□ -0.75
NPLOC4-218ENST00000574964 TYMSP04818 313 aa10.39□□□□□ -0.75
NPLOC4-218ENST00000574964 S100A4P26447 101 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-218ENST00000574964 NANOS2P60321 138 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-218ENST00000574964 SRSF3P84103 164 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-218ENST00000574964 OR5I1Q13606 314 aa10.39□□□□□ -0.75
NPLOC4-218ENST00000574964 C11orf21Q9P2W6 132 aa10.39□□□□□ -0.75
NPLOC4-218ENST00000574964 TRBV20OR9-2A0A075B6H5 130 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 IGLV2-8P01709 118 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 DEFB130BP0DP73 79 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 DEFB130AP0DP74 79 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 TCL1AP56279 114 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 DAD1P61803 113 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 C11orf72Q8NBR9 251 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 OCC1Q8TAD7 63 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 MDFICQ9P1T7 246 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 NACAE9PAV3 2078 aa10.38□□□□□ -0.75
NPLOC4-218ENST00000574964 TMSB15BA0A087X1C1 80 aa10.37□□□□□ -0.75
NPLOC4-218ENST00000574964 IGKV3D-20A0A0C4DH25 116 aa10.37□□□□□ -0.75
NPLOC4-218ENST00000574964 FAM74A3Q4VXF1 159 aa10.37□□□□□ -0.75
NPLOC4-218ENST00000574964 SOHLH1Q5JUK2 328 aa10.37□□□□□ -0.75
NPLOC4-218ENST00000574964 MUC7Q8TAX7 377 aa10.37□□□□□ -0.75
NPLOC4-218ENST00000574964 SPXQ9BT56 116 aa10.37□□□□□ -0.75
NPLOC4-218ENST00000574964 MUC4Q99102 2169 aa10.36□□□□□ -0.75
NPLOC4-218ENST00000574964 TRGV1A0A0A0MS02 117 aa10.36□□□□□ -0.75
NPLOC4-218ENST00000574964 IGHV3-16A0A0C4DH30 117 aa10.36□□□□□ -0.75
NPLOC4-218ENST00000574964 C9JQL5 133 aa10.36□□□□□ -0.75
NPLOC4-218ENST00000574964 ASIPP42127 132 aa10.36□□□□□ -0.75
NPLOC4-218ENST00000574964 DAZ2Q13117 558 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-218ENST00000574964 C12orf74Q32Q52 190 aa10.36□□□□□ -0.75
NPLOC4-218ENST00000574964 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
NPLOC4-218ENST00000574964 GAGE12BA1L429 117 aa10.35□□□□□ -0.75
NPLOC4-218ENST00000574964 GRIFINA4D1Z8 144 aa10.35□□□□□ -0.75
NPLOC4-218ENST00000574964 KRBOX1C9JBD0 128 aa10.35□□□□□ -0.75
NPLOC4-218ENST00000574964 GAGE7O76087 117 aa10.35□□□□□ -0.75
NPLOC4-218ENST00000574964 P01737 135 aa10.35□□□□□ -0.75
NPLOC4-218ENST00000574964 GAGE12FP0CL80 117 aa10.35□□□□□ -0.75
NPLOC4-218ENST00000574964 GAGE12GP0CL81 117 aa10.35□□□□□ -0.75
NPLOC4-218ENST00000574964 GAGE12IP0CL82 117 aa10.35□□□□□ -0.75
NPLOC4-218ENST00000574964 TMEM241Q24JQ0 296 aa10.35□□□□□ -0.75
NPLOC4-218ENST00000574964 LY96Q9Y6Y9 160 aa10.35□□□□□ -0.75
NPLOC4-218ENST00000574964 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
NPLOC4-218ENST00000574964 HTN3P15516 51 aa10.34□□□□□ -0.75
NPLOC4-218ENST00000574964 RPL19P84098 196 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-218ENST00000574964 ZFAND6Q6FIF0 208 aa10.34□□□□□ -0.75
NPLOC4-218ENST00000574964 Q6ZTC4 211 aa10.34□□□□□ -0.75
NPLOC4-218ENST00000574964 Q6ZTI0 123 aa10.34□□□□□ -0.75
NPLOC4-218ENST00000574964 COMMD7Q86VX2 200 aa10.34□□□□□ -0.75
NPLOC4-218ENST00000574964 OR2D3Q8NGH3 330 aa10.34□□□□□ -0.75
NPLOC4-218ENST00000574964 MRPL16Q9NX20 251 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-218ENST00000574964 NAT8Q9UHE5 227 aa10.34□□□□□ -0.75
NPLOC4-218ENST00000574964 TRAV10A0A0B4J240 114 aa10.33□□□□□ -0.76
NPLOC4-218ENST00000574964 H3BVH4 76 aa10.33□□□□□ -0.76
NPLOC4-218ENST00000574964 M0R2P5 195 aa10.33□□□□□ -0.76
NPLOC4-218ENST00000574964 SPINK4O60575 86 aa10.33□□□□□ -0.76
NPLOC4-218ENST00000574964 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-218ENST00000574964 LGALS9BQ3B8N2 356 aa10.33□□□□□ -0.76
NPLOC4-218ENST00000574964 PHLDA1Q8WV24 401 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-218ENST00000574964 XKRY2A2RUG3 117 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 C19orf71A6NCJ1 209 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 C3orf84H3BNL1 204 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 K7EN84 100 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 ATP5G1P05496 136 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 SFTA3P0C7M3 94 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 ERVFC1-1P60608 527 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 UQCC3Q6UW78 93 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 LINC01551Q86U37 167 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 NUDT10Q8NFP7 164 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 NUDT11Q96G61 164 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 RNASE7Q9H1E1 156 aaKnown RBP10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 IL36BQ9NZH7 164 aa10.32□□□□□ -0.76
NPLOC4-218ENST00000574964 DEFB131BA0A096LNP1 70 aa10.31□□□□□ -0.76
NPLOC4-218ENST00000574964 NUPR2A6NF83 97 aa10.31□□□□□ -0.76
NPLOC4-218ENST00000574964 GATCO43716 136 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-218ENST00000574964 CXCL1P09341 107 aa10.31□□□□□ -0.76
NPLOC4-218ENST00000574964 ARMS2P0C7Q2 107 aa10.31□□□□□ -0.76
NPLOC4-218ENST00000574964 RNASE3P12724 160 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-218ENST00000574964 ADIRFQ15847 76 aa10.31□□□□□ -0.76
NPLOC4-218ENST00000574964 DNLZQ5SXM8 178 aa10.31□□□□□ -0.76
NPLOC4-218ENST00000574964 C9orf85Q96MD7 179 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms