RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 C18orf32Q8TCD1 76 aa21.25■□□□□ 0.99
CTDNEP1-210ENST00000574322 C12orf57Q99622 126 aa21.25■□□□□ 0.99
CTDNEP1-210ENST00000574322 RNF114Q9Y508 228 aa21.25■□□□□ 0.99
CTDNEP1-210ENST00000574322 KLLNB2CW77 178 aa21.24■□□□□ 0.99
CTDNEP1-210ENST00000574322 SERF1AO75920 110 aa21.24■□□□□ 0.99
CTDNEP1-210ENST00000574322 GPX1P07203 203 aa21.24■□□□□ 0.99
CTDNEP1-210ENST00000574322 C11orf44Q8N8P7 122 aa21.23■□□□□ 0.99
CTDNEP1-210ENST00000574322 HIST2H2BDQ6DRA6 164 aa21.22■□□□□ 0.99
CTDNEP1-210ENST00000574322 TMEM158Q8WZ71 300 aa21.22■□□□□ 0.99
CTDNEP1-210ENST00000574322 SIGLEC8Q9NYZ4 499 aa21.22■□□□□ 0.99
CTDNEP1-210ENST00000574322 DEFB114Q30KQ6 69 aa21.21■□□□□ 0.99
CTDNEP1-210ENST00000574322 EBLN2Q6P2I7 272 aa21.21■□□□□ 0.99
CTDNEP1-210ENST00000574322 FOXI2Q6ZQN5 318 aa21.21■□□□□ 0.99
CTDNEP1-210ENST00000574322 Q6ZQT7 251 aa21.21■□□□□ 0.99
CTDNEP1-210ENST00000574322 DUSP14O95147 198 aaKnown RBP21.2■□□□□ 0.98
CTDNEP1-210ENST00000574322 TMEM61Q8N0U2 210 aa21.2■□□□□ 0.98
CTDNEP1-210ENST00000574322 A0A1W2PRX2 142 aa21.19■□□□□ 0.98
CTDNEP1-210ENST00000574322 OR5AL1P0C617 328 aa21.19■□□□□ 0.98
CTDNEP1-210ENST00000574322 SNAI2O43623 268 aa21.18■□□□□ 0.98
CTDNEP1-210ENST00000574322 NTF3P20783 257 aa21.18■□□□□ 0.98
CTDNEP1-210ENST00000574322 DYNLRB2Q8TF09 96 aa21.18■□□□□ 0.98
CTDNEP1-210ENST00000574322 TRAV25A0A0B4J276 109 aa21.18■□□□□ 0.98
CTDNEP1-210ENST00000574322 RNASE4P34096 147 aaKnown RBP21.18■□□□□ 0.98
CTDNEP1-210ENST00000574322 LEPP41159 167 aa21.18■□□□□ 0.98
CTDNEP1-210ENST00000574322 PYY3Q5JQD4 70 aa21.18■□□□□ 0.98
CTDNEP1-210ENST00000574322 IGHV4-4A0A075B6R2 117 aa21.17■□□□□ 0.98
CTDNEP1-210ENST00000574322 FAM104BQ5XKR9 115 aa21.17■□□□□ 0.98
CTDNEP1-210ENST00000574322 RCHY1Q96PM5 261 aa21.17■□□□□ 0.98
CTDNEP1-210ENST00000574322 ADARB2-AS1A8MUL3 147 aa21.16■□□□□ 0.98
CTDNEP1-210ENST00000574322 TWIST1Q15672 202 aa21.16■□□□□ 0.98
CTDNEP1-210ENST00000574322 DNLZQ5SXM8 178 aa21.16■□□□□ 0.98
CTDNEP1-210ENST00000574322 TMEM191AQ9H0A3 160 aa21.16■□□□□ 0.98
CTDNEP1-210ENST00000574322 FBN1P35555 2871 aaKnown RBP21.16■□□□□ 0.98
CTDNEP1-210ENST00000574322 J3KRW8 73 aa21.15■□□□□ 0.98
CTDNEP1-210ENST00000574322 CD33P20138 364 aa21.15■□□□□ 0.98
CTDNEP1-210ENST00000574322 DMRTA1Q5VZB9 504 aa21.15■□□□□ 0.98
CTDNEP1-210ENST00000574322 KCNS1Q96KK3 526 aa21.15■□□□□ 0.98
CTDNEP1-210ENST00000574322 A8MTW9 85 aa21.15■□□□□ 0.98
CTDNEP1-210ENST00000574322 KIR3DS1Q14943 382 aa21.15■□□□□ 0.98
CTDNEP1-210ENST00000574322 PRR31Q5SQ13 230 aa21.15■□□□□ 0.98
CTDNEP1-210ENST00000574322 SPAG8Q99932 426 aaPredicted RBP21.15■□□□□ 0.98
CTDNEP1-210ENST00000574322 MED14OSP0DP75 135 aa21.14■□□□□ 0.97
CTDNEP1-210ENST00000574322 IQCJQ1A5X6 159 aa21.14■□□□□ 0.97
CTDNEP1-210ENST00000574322 U3KQK5 164 aa21.13■□□□□ 0.97
CTDNEP1-210ENST00000574322 MUC21A0A0G2JKD1 596 aa21.12■□□□□ 0.97
CTDNEP1-210ENST00000574322 MUC21A0A140T8X8 626 aa21.12■□□□□ 0.97
CTDNEP1-210ENST00000574322 TSPOP30536 169 aa21.12■□□□□ 0.97
CTDNEP1-210ENST00000574322 CACNG7P62955 275 aa21.12■□□□□ 0.97
CTDNEP1-210ENST00000574322 ANXA2RQ3ZCQ2 193 aa21.12■□□□□ 0.97
CTDNEP1-210ENST00000574322 CD300EQ496F6 205 aaPredicted RBP21.12■□□□□ 0.97
CTDNEP1-210ENST00000574322 MUC21Q5SSG8 566 aa21.12■□□□□ 0.97
CTDNEP1-210ENST00000574322 AMTNQ6UX39 209 aa21.12■□□□□ 0.97
CTDNEP1-210ENST00000574322 C7orf71A4D174 169 aa21.11■□□□□ 0.97
CTDNEP1-210ENST00000574322 JOSD1Q15040 202 aaPredicted RBP21.11■□□□□ 0.97
CTDNEP1-210ENST00000574322 MSRB1Q9NZV6 116 aa21.11■□□□□ 0.97
CTDNEP1-210ENST00000574322 OR4C46A6NHA9 309 aa21.1■□□□□ 0.97
CTDNEP1-210ENST00000574322 ZNF324O75467 553 aaPredicted RBP21.1■□□□□ 0.97
CTDNEP1-210ENST00000574322 ZNF256Q9Y2P7 627 aaPredicted RBP21.1■□□□□ 0.97
CTDNEP1-210ENST00000574322 CDKN1BP46527 198 aa21.09■□□□□ 0.97
CTDNEP1-210ENST00000574322 DEFB131AP59861 70 aa21.09■□□□□ 0.97
CTDNEP1-210ENST00000574322 AMN1Q8IY45 258 aa21.09■□□□□ 0.97
CTDNEP1-210ENST00000574322 OR10AG1Q8NH19 301 aa21.09■□□□□ 0.97
CTDNEP1-210ENST00000574322 NAGKQ9UJ70 344 aa21.09■□□□□ 0.97
CTDNEP1-210ENST00000574322 HLA-DRB4P13762 266 aa21.09■□□□□ 0.97
CTDNEP1-210ENST00000574322 ASIPP42127 132 aa21.09■□□□□ 0.97
CTDNEP1-210ENST00000574322 TDRG1Q3Y452 100 aa21.09■□□□□ 0.97
CTDNEP1-210ENST00000574322 SCRT2Q9NQ03 307 aa21.09■□□□□ 0.97
CTDNEP1-210ENST00000574322 HLA-DRB4X5D2U9 266 aa21.09■□□□□ 0.97
CTDNEP1-210ENST00000574322 SSTP61278 116 aa21.08■□□□□ 0.97
CTDNEP1-210ENST00000574322 NDUFA11Q86Y39 141 aa21.08■□□□□ 0.97
CTDNEP1-210ENST00000574322 SAMD10Q9BYL1 202 aa21.08■□□□□ 0.97
CTDNEP1-210ENST00000574322 MRPL51Q4U2R6 128 aaKnown RBP21.07■□□□□ 0.96
CTDNEP1-210ENST00000574322 NIT1Q86X76 327 aa21.07■□□□□ 0.96
CTDNEP1-210ENST00000574322 URB1-AS1Q96HZ7 61 aa21.07■□□□□ 0.96
CTDNEP1-210ENST00000574322 MAP6D1Q9H9H5 199 aa21.07■□□□□ 0.96
CTDNEP1-210ENST00000574322 H3BVH4 76 aa21.07■□□□□ 0.96
CTDNEP1-210ENST00000574322 CHCHD1Q96BP2 118 aaKnown RBP21.07■□□□□ 0.96
CTDNEP1-210ENST00000574322 H3BMM0 161 aa21.06■□□□□ 0.96
CTDNEP1-210ENST00000574322 KRTAP10-3P60369 221 aa21.06■□□□□ 0.96
CTDNEP1-210ENST00000574322 RNF185Q96GF1 192 aa21.06■□□□□ 0.96
CTDNEP1-210ENST00000574322 NIT2Q9NQR4 276 aa21.06■□□□□ 0.96
CTDNEP1-210ENST00000574322 ORMDL3Q8N138 153 aa21.05■□□□□ 0.96
CTDNEP1-210ENST00000574322 MDFIQ99750 246 aa21.05■□□□□ 0.96
CTDNEP1-210ENST00000574322 RAB4AP20338 218 aa21.04■□□□□ 0.96
CTDNEP1-210ENST00000574322 FAM159AQ6UWV7 190 aa21.04■□□□□ 0.96
CTDNEP1-210ENST00000574322 COL6A5A8TX70 2615 aa21.04■□□□□ 0.96
CTDNEP1-210ENST00000574322 SORL1Q92673 2214 aa21.04■□□□□ 0.96
CTDNEP1-210ENST00000574322 TRAV12-3A0A0B4J271 114 aa21.04■□□□□ 0.96
CTDNEP1-210ENST00000574322 D6R8Y8 96 aa21.04■□□□□ 0.96
CTDNEP1-210ENST00000574322 IGKV3-20P01619 116 aa21.04■□□□□ 0.96
CTDNEP1-210ENST00000574322 PPBPP02775 128 aa21.04■□□□□ 0.96
CTDNEP1-210ENST00000574322 AMTP48728 403 aa21.04■□□□□ 0.96
CTDNEP1-210ENST00000574322 KNCNA6PVL3 124 aa21.03■□□□□ 0.96
CTDNEP1-210ENST00000574322 M0R2Z0 102 aa21.03■□□□□ 0.96
CTDNEP1-210ENST00000574322 GNRH2O43555 120 aa21.03■□□□□ 0.96
CTDNEP1-210ENST00000574322 RNASE3P12724 160 aaKnown RBP21.03■□□□□ 0.96
CTDNEP1-210ENST00000574322 S100A4P26447 101 aaKnown RBP21.03■□□□□ 0.96
CTDNEP1-210ENST00000574322 SPANXN1Q5VSR9 72 aa21.03■□□□□ 0.96
CTDNEP1-210ENST00000574322 C12orf54Q6X4T0 127 aa21.03■□□□□ 0.96
CTDNEP1-210ENST00000574322 Q6ZWC4 215 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms