RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 ZNF415Q09FC8 603 aa15.23■□□□□ 0.03
NME3-210ENST00000567271 TMEM183BQ1AE95 376 aa15.23■□□□□ 0.03
NME3-210ENST00000567271 SMUG1Q53HV7 270 aa15.23■□□□□ 0.03
NME3-210ENST00000567271 TMEM183AQ8IXX5 376 aa15.23■□□□□ 0.03
NME3-210ENST00000567271 TRGV11A0A075B6L2 103 aa15.22■□□□□ 0.03
NME3-210ENST00000567271 TRGV1A0A0A0MS02 117 aa15.22■□□□□ 0.03
NME3-210ENST00000567271 CCL20P78556 96 aa15.22■□□□□ 0.03
NME3-210ENST00000567271 GNRH2O43555 120 aa15.21■□□□□ 0.03
NME3-210ENST00000567271 PFN1P07737 140 aaKnown RBP15.21■□□□□ 0.03
NME3-210ENST00000567271 Q86TA4 180 aa15.21■□□□□ 0.03
NME3-210ENST00000567271 KCNS1Q96KK3 526 aa15.21■□□□□ 0.03
NME3-210ENST00000567271 C18orf15Q96N68 181 aa15.21■□□□□ 0.03
NME3-210ENST00000567271 LGALS9BQ3B8N2 356 aa15.2■□□□□ 0.02
NME3-210ENST00000567271 FMC1Q96HJ9 113 aa15.2■□□□□ 0.02
NME3-210ENST00000567271 SDF2L1Q9HCN8 221 aa15.2■□□□□ 0.02
NME3-210ENST00000567271 C11orf21Q9P2W6 132 aa15.2■□□□□ 0.02
NME3-210ENST00000567271 TRGV2A0A075B6R0 118 aa15.19■□□□□ 0.02
NME3-210ENST00000567271 IGHV3-16A0A0C4DH30 117 aa15.19■□□□□ 0.02
NME3-210ENST00000567271 TRBV6-1A0A0K0K1D8 114 aa15.19■□□□□ 0.02
NME3-210ENST00000567271 TYMSP04818 313 aa15.19■□□□□ 0.02
NME3-210ENST00000567271 HOXA5P20719 270 aa15.19■□□□□ 0.02
NME3-210ENST00000567271 MRPL16Q9NX20 251 aaKnown RBP15.19■□□□□ 0.02
NME3-210ENST00000567271 ZFP30Q9Y2G7 519 aa15.19■□□□□ 0.02
NME3-210ENST00000567271 TEX46H3BTG2 121 aa15.18■□□□□ 0.02
NME3-210ENST00000567271 NKX2-5P52952 324 aaPredicted RBP15.18■□□□□ 0.02
NME3-210ENST00000567271 UBE2G1P62253 170 aa15.18■□□□□ 0.02
NME3-210ENST00000567271 C15orf53Q8NAA6 179 aa15.18■□□□□ 0.02
NME3-210ENST00000567271 SPXQ9BT56 116 aa15.18■□□□□ 0.02
NME3-210ENST00000567271 P0DMU3 169 aa15.17■□□□□ 0.02
NME3-210ENST00000567271 FAM231AP0DMU4 169 aa15.17■□□□□ 0.02
NME3-210ENST00000567271 FAM231CP0DMU5 169 aa15.17■□□□□ 0.02
NME3-210ENST00000567271 AKR1C3P42330 323 aa15.17■□□□□ 0.02
NME3-210ENST00000567271 OR5I1Q13606 314 aa15.17■□□□□ 0.02
NME3-210ENST00000567271 COX8CQ7Z4L0 72 aa15.17■□□□□ 0.02
NME3-210ENST00000567271 MANBALQ9NQG1 85 aa15.17■□□□□ 0.02
NME3-210ENST00000567271 GNG13Q9P2W3 67 aa15.17■□□□□ 0.02
NME3-210ENST00000567271 SCO2A0A1W2PP80 73 aa15.15■□□□□ 0.02
NME3-210ENST00000567271 FABP5P3A8MUU1 101 aa15.15■□□□□ 0.02
NME3-210ENST00000567271 LTAP01374 205 aa15.15■□□□□ 0.02
NME3-210ENST00000567271 RASL10AQ92737 203 aa15.15■□□□□ 0.02
NME3-210ENST00000567271 ZC2HC1AQ96GY0 325 aa15.15■□□□□ 0.02
NME3-210ENST00000567271 DNAH10Q8IVF4 4471 aa15.15■□□□□ 0.02
NME3-210ENST00000567271 TRAV26-1A0A087WT03 109 aa15.14■□□□□ 0.01
NME3-210ENST00000567271 S100A9P06702 114 aaKnown RBP15.14■□□□□ 0.01
NME3-210ENST00000567271 CRIP1P50238 77 aa15.14■□□□□ 0.01
NME3-210ENST00000567271 BOLA1Q9Y3E2 137 aa15.14■□□□□ 0.01
NME3-210ENST00000567271 ALKAL2Q6UX46 152 aa15.13■□□□□ 0.01
NME3-210ENST00000567271 POM121L12Q8N7R1 296 aa15.13■□□□□ 0.01
NME3-210ENST00000567271 IGKV3D-20A0A0C4DH25 116 aa15.12■□□□□ 0.01
NME3-210ENST00000567271 M0R2P5 195 aa15.12■□□□□ 0.01
NME3-210ENST00000567271 NUDT3O95989 172 aa15.12■□□□□ 0.01
NME3-210ENST00000567271 TXNDC17Q9BRA2 123 aa15.12■□□□□ 0.01
NME3-210ENST00000567271 MUC4Q99102 2169 aa15.11■□□□□ 0.01
NME3-210ENST00000567271 A0A0J9YY99 117 aa15.11■□□□□ 0.01
NME3-210ENST00000567271 IGHV3-53P01767 116 aa15.11■□□□□ 0.01
NME3-210ENST00000567271 EPPK1P58107 5090 aaKnown RBP15.11■□□□□ 0.01
NME3-210ENST00000567271 H3BNG1 76 aa15.1■□□□□ 0.01
NME3-210ENST00000567271 SH2D1AO60880 128 aa15.1■□□□□ 0.01
NME3-210ENST00000567271 IFNA1P01562 189 aa15.1■□□□□ 0.01
NME3-210ENST00000567271 RNF212Q495C1 297 aa15.1■□□□□ 0.01
NME3-210ENST00000567271 FAM162BQ5T6X4 162 aa15.1■□□□□ 0.01
NME3-210ENST00000567271 C11orf52Q96A22 123 aa15.1■□□□□ 0.01
NME3-210ENST00000567271 ORM1P02763 201 aa15.09■□□□□ 0.01
NME3-210ENST00000567271 ZNF674Q2M3X9 581 aa15.09■□□□□ 0.01
NME3-210ENST00000567271 UBE2DNLQ8IWF7 75 aa15.09■□□□□ 0.01
NME3-210ENST00000567271 NHLRC2Q8NBF2 726 aa15.09■□□□□ 0.01
NME3-210ENST00000567271 VSIG2Q96IQ7 327 aa15.09■□□□□ 0.01
NME3-210ENST00000567271 C9orf85Q96MD7 179 aa15.09■□□□□ 0.01
NME3-210ENST00000567271 DNAH2Q9P225 4427 aa15.09■□□□□ 0.01
NME3-210ENST00000567271 BCL2P10415 239 aa15.08■□□□□ 0
NME3-210ENST00000567271 RNASE3P12724 160 aaKnown RBP15.08■□□□□ 0
NME3-210ENST00000567271 BLOC1S1P78537 153 aa15.08■□□□□ 0
NME3-210ENST00000567271 MEF2BQ02080 365 aaPredicted RBP15.08■□□□□ 0
NME3-210ENST00000567271 FHL2Q14192 279 aa15.08■□□□□ 0
NME3-210ENST00000567271 BAGE2Q86Y30 109 aa15.08■□□□□ 0
NME3-210ENST00000567271 MLST8Q9BVC4 326 aa15.08■□□□□ 0
NME3-210ENST00000567271 B4DEV8 164 aa15.07■□□□□ 0
NME3-210ENST00000567271 KRBOX1C9JBD0 128 aa15.07■□□□□ 0
NME3-210ENST00000567271 RPL35P42766 123 aaKnown RBP15.07■□□□□ 0
NME3-210ENST00000567271 ZNF479Q96JC4 524 aa15.07■□□□□ 0
NME3-210ENST00000567271 SFTA3P0C7M3 94 aa15.06■□□□□ 0
NME3-210ENST00000567271 SLAQ13239 276 aa15.06■□□□□ 0
NME3-210ENST00000567271 ZNF876PQ49A33 203 aa15.06■□□□□ 0
NME3-210ENST00000567271 PTH2Q96A98 100 aa15.06■□□□□ 0
NME3-210ENST00000567271 DERL1Q9BUN8 251 aa15.06■□□□□ 0
NME3-210ENST00000567271 PRO0255Q9UI72 69 aa15.06■□□□□ 0
NME3-210ENST00000567271 VAX2Q9UIW0 290 aa15.06■□□□□ 0
NME3-210ENST00000567271 TRAV4A0A0B4J268 109 aa15.05■□□□□ -0
NME3-210ENST00000567271 C9JCJ5 164 aa15.05■□□□□ -0
NME3-210ENST00000567271 M0R036 132 aa15.05■□□□□ -0
NME3-210ENST00000567271 PDE6DO43924 150 aa15.05■□□□□ -0
NME3-210ENST00000567271 S100A4P26447 101 aaKnown RBP15.05■□□□□ -0
NME3-210ENST00000567271 TAGLN2P37802 199 aaKnown RBP15.05■□□□□ -0
NME3-210ENST00000567271 ASIPP42127 132 aa15.05■□□□□ -0
NME3-210ENST00000567271 DNLZQ5SXM8 178 aa15.05■□□□□ -0
NME3-210ENST00000567271 ZNF575Q86XF7 245 aa15.05■□□□□ -0
NME3-210ENST00000567271 OR4C5Q8NGB2 326 aa15.05■□□□□ -0
NME3-210ENST00000567271 HHLA3Q9XRX5 114 aa15.05■□□□□ -0
NME3-210ENST00000567271 PAX4O43316 350 aa15.04■□□□□ -0
NME3-210ENST00000567271 CRYBA4P53673 196 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms