RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 TMEM256Q8N2U0 113 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 PACRGQ96M98 296 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-207ENST00000566095 SSBP4Q9BWG4 385 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-207ENST00000566095 TP53TG3Q9ULZ0 132 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 TRAPPC1Q9Y5R8 145 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 SORL1Q92673 2214 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 TENM1Q9UKZ4 2725 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 LOC102724200A0A096LPH7 203 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-207ENST00000566095 KIR2DL5BA0A0G2JN68 375 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 KIR2DL5BA0A0G2JPC4 375 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 SH2D1AO60880 128 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 CD7P09564 240 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 IGLC6P0CF74 106 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 TRPT1Q86TN4 253 aaKnown RBP7.27□□□□□ -1.25
SF3B3-207ENST00000566095 KIR2DL5AQ8N109 375 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 ZFAND2AQ8N6M9 145 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 NHLRC2Q8NBF2 726 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 KIR2DL5BQ8NHK3 375 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 GOLT1BQ9Y3E0 138 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 STAB1Q9NY15 2570 aa7.27□□□□□ -1.25
SF3B3-207ENST00000566095 UBE2CO00762 179 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST1H2BKO60814 126 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 IGKV3-20P01619 116 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST1H2BJP06899 126 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 ZNF705DP0CH99 300 aaPredicted RBP7.26□□□□□ -1.25
SF3B3-207ENST00000566095 ZNF705BP0CI00 300 aaPredicted RBP7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST1H2BOP23527 126 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST1H2BBP33778 126 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 RNASE4P34096 147 aaKnown RBP7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST1H2BDP58876 126 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST1H2BCP62807 126 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 CACNG7P62955 275 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 Q0VG73 95 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST2H2BEQ16778 126 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 OXLD1Q5BKU9 147 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 OR10J3Q5JRS4 329 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.26□□□□□ -1.25
SF3B3-207ENST00000566095 PIK3CD-AS1Q5SR53 167 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 SAMD5Q5TGI4 173 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 FAM159AQ6UWV7 190 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 TMEM136Q6ZRR5 245 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 GTSF1Q8WW33 167 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST1H2BHQ93079 126 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 C8orf49Q96NF6 230 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST1H2BNQ99877 126 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 HIST1H2BMQ99879 126 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 LINC00467Q9BRT7 94 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 TMEM208Q9BTX3 173 aa7.26□□□□□ -1.25
SF3B3-207ENST00000566095 TMA7Q9Y2S6 64 aaKnown RBP7.26□□□□□ -1.25
SF3B3-207ENST00000566095 TRGV11A0A075B6L2 103 aa7.25□□□□□ -1.25
SF3B3-207ENST00000566095 SNAI2O43623 268 aa7.25□□□□□ -1.25
SF3B3-207ENST00000566095 ORM1P02763 201 aa7.25□□□□□ -1.25
SF3B3-207ENST00000566095 ESDP10768 282 aa7.25□□□□□ -1.25
SF3B3-207ENST00000566095 HOXA5P20719 270 aa7.25□□□□□ -1.25
SF3B3-207ENST00000566095 SPINK13Q1W4C9 94 aa7.25□□□□□ -1.25
SF3B3-207ENST00000566095 GDF5OSQ5U4N7 250 aa7.25□□□□□ -1.25
SF3B3-207ENST00000566095 NDUFAF3Q9BU61 184 aa7.25□□□□□ -1.25
SF3B3-207ENST00000566095 CSTL1Q9H114 145 aa7.25□□□□□ -1.25
SF3B3-207ENST00000566095 C19orf73Q9NVV2 129 aa7.25□□□□□ -1.25
SF3B3-207ENST00000566095 NOTCH3Q9UM47 2321 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 LOC105371267A0A1B0GV96 52 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 A8MZ25 164 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 SNURFLB1AK76 121 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 J3KRW8 73 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 M0R2Z0 102 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 PPBPP02775 128 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 TRGC1P0CF51 173 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 S100A4P26447 101 aaKnown RBP7.24□□□□□ -1.25
SF3B3-207ENST00000566095 AMTNQ6UX39 209 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 DEFB125Q8N687 156 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 FER1L6-AS1Q8NA97 138 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 LAMTOR2Q9Y2Q5 125 aa7.24□□□□□ -1.25
SF3B3-207ENST00000566095 TRAV12-3A0A0B4J271 114 aa7.23□□□□□ -1.25
SF3B3-207ENST00000566095 CA1P00915 261 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-207ENST00000566095 ASIPP42127 132 aa7.23□□□□□ -1.25
SF3B3-207ENST00000566095 ZNF80P51504 273 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-207ENST00000566095 DEFB1P60022 68 aa7.23□□□□□ -1.25
SF3B3-207ENST00000566095 FABP9Q0Z7S8 132 aa7.23□□□□□ -1.25
SF3B3-207ENST00000566095 GFI1BQ5VTD9 330 aa7.23□□□□□ -1.25
SF3B3-207ENST00000566095 PTH2Q96A98 100 aa7.23□□□□□ -1.25
SF3B3-207ENST00000566095 TMEM191AQ9H0A3 160 aa7.23□□□□□ -1.25
SF3B3-207ENST00000566095 MRPL18Q9H0U6 180 aaKnown RBP7.23□□□□□ -1.25
SF3B3-207ENST00000566095 NAGKQ9UJ70 344 aa7.23□□□□□ -1.25
SF3B3-207ENST00000566095 IGHV1OR15-1A0A075B7D0 117 aa7.22□□□□□ -1.25
SF3B3-207ENST00000566095 IGKV3D-20A0A0C4DH25 116 aa7.22□□□□□ -1.25
SF3B3-207ENST00000566095 G3V4G9 280 aa7.22□□□□□ -1.25
SF3B3-207ENST00000566095 APCSP02743 223 aa7.22□□□□□ -1.25
SF3B3-207ENST00000566095 RPL35AP18077 110 aaKnown RBP7.22□□□□□ -1.25
SF3B3-207ENST00000566095 KPRPQ5T749 579 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-207ENST00000566095 ZNF575Q86XF7 245 aa7.22□□□□□ -1.25
SF3B3-207ENST00000566095 LINC01587Q99440 93 aa7.22□□□□□ -1.25
SF3B3-207ENST00000566095 SCRT2Q9NQ03 307 aa7.22□□□□□ -1.25
SF3B3-207ENST00000566095 TRAV12-2A0A075B6T6 113 aa7.21□□□□□ -1.26
SF3B3-207ENST00000566095 SMIM9A6NGZ8 99 aa7.21□□□□□ -1.26
SF3B3-207ENST00000566095 CBY3A6NI87 242 aa7.21□□□□□ -1.26
SF3B3-207ENST00000566095 ZNF324O75467 553 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-207ENST00000566095 NXPH4O95158 308 aa7.21□□□□□ -1.26
SF3B3-207ENST00000566095 IGHV4-30-4P0DP06 118 aa7.21□□□□□ -1.26
SF3B3-207ENST00000566095 ZNF415Q09FC8 603 aa7.21□□□□□ -1.26
SF3B3-207ENST00000566095 ZNF124Q15973 351 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms