RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 MRPL54Q6P161 138 aaKnown RBP10.55□□□□□ -0.72
COMMD4-205ENST00000562310 TRPT1Q86TN4 253 aaKnown RBP10.55□□□□□ -0.72
COMMD4-205ENST00000562310 C20orf144Q9BQM9 153 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 NAGKQ9UJ70 344 aa10.55□□□□□ -0.72
COMMD4-205ENST00000562310 SORL1Q92673 2214 aa10.54□□□□□ -0.72
COMMD4-205ENST00000562310 RBMY1BA6NDE4 496 aaKnown RBP10.54□□□□□ -0.72
COMMD4-205ENST00000562310 RBMY1EA6NEQ0 496 aaKnown RBP10.54□□□□□ -0.72
COMMD4-205ENST00000562310 M0R2Z0 102 aa10.54□□□□□ -0.72
COMMD4-205ENST00000562310 RBMY1DP0C7P1 496 aaKnown RBP10.54□□□□□ -0.72
COMMD4-205ENST00000562310 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
COMMD4-205ENST00000562310 NUTF2P61970 127 aaKnown RBP10.54□□□□□ -0.72
COMMD4-205ENST00000562310 ZNF124Q15973 351 aa10.54□□□□□ -0.72
COMMD4-205ENST00000562310 FAM159AQ6UWV7 190 aa10.54□□□□□ -0.72
COMMD4-205ENST00000562310 MDFIQ99750 246 aa10.54□□□□□ -0.72
COMMD4-205ENST00000562310 C19orf73Q9NVV2 129 aa10.54□□□□□ -0.72
COMMD4-205ENST00000562310 TENM1Q9UKZ4 2725 aa10.54□□□□□ -0.72
COMMD4-205ENST00000562310 TRAV12-3A0A0B4J271 114 aa10.53□□□□□ -0.72
COMMD4-205ENST00000562310 SPINK4O60575 86 aa10.53□□□□□ -0.72
COMMD4-205ENST00000562310 INSP01308 110 aa10.53□□□□□ -0.72
COMMD4-205ENST00000562310 CD7P09564 240 aa10.53□□□□□ -0.72
COMMD4-205ENST00000562310 ASIPP42127 132 aa10.53□□□□□ -0.72
COMMD4-205ENST00000562310 TDRG1Q3Y452 100 aa10.53□□□□□ -0.72
COMMD4-205ENST00000562310 DNLZQ5SXM8 178 aa10.53□□□□□ -0.72
COMMD4-205ENST00000562310 TPPP3Q9BW30 176 aa10.53□□□□□ -0.72
COMMD4-205ENST00000562310 CNFNQ9BYD5 112 aa10.53□□□□□ -0.72
COMMD4-205ENST00000562310 TRAPPC1Q9Y5R8 145 aa10.53□□□□□ -0.72
COMMD4-205ENST00000562310 GRIFINA4D1Z8 144 aa10.52□□□□□ -0.73
COMMD4-205ENST00000562310 SNURFLB1AK76 121 aa10.52□□□□□ -0.73
COMMD4-205ENST00000562310 ZNF324O75467 553 aaPredicted RBP10.52□□□□□ -0.73
COMMD4-205ENST00000562310 TRGC2P03986 189 aa10.52□□□□□ -0.73
COMMD4-205ENST00000562310 OR5AL1P0C617 328 aa10.52□□□□□ -0.73
COMMD4-205ENST00000562310 KIR3DS1Q14943 382 aa10.52□□□□□ -0.73
COMMD4-205ENST00000562310 ANXA2RQ3ZCQ2 193 aa10.52□□□□□ -0.73
COMMD4-205ENST00000562310 LYZL1Q6UWQ5 148 aa10.52□□□□□ -0.73
COMMD4-205ENST00000562310 TMEM136Q6ZRR5 245 aa10.52□□□□□ -0.73
COMMD4-205ENST00000562310 SPATA3Q8NHX4 192 aa10.52□□□□□ -0.73
COMMD4-205ENST00000562310 TRAV12-2A0A075B6T6 113 aa10.51□□□□□ -0.73
COMMD4-205ENST00000562310 IGHV1OR15-1A0A075B7D0 117 aa10.51□□□□□ -0.73
COMMD4-205ENST00000562310 SNAI2O43623 268 aa10.51□□□□□ -0.73
COMMD4-205ENST00000562310 ARMS2P0C7Q2 107 aa10.51□□□□□ -0.73
COMMD4-205ENST00000562310 RAB4BP61018 213 aa10.51□□□□□ -0.73
COMMD4-205ENST00000562310 CACNG7P62955 275 aa10.51□□□□□ -0.73
COMMD4-205ENST00000562310 MUC21Q5SSG8 566 aa10.51□□□□□ -0.73
COMMD4-205ENST00000562310 MORN3Q6PF18 240 aaPredicted RBP10.51□□□□□ -0.73
COMMD4-205ENST00000562310 GATD1Q8NB37 220 aa10.51□□□□□ -0.73
COMMD4-205ENST00000562310 FRZBQ92765 325 aa10.51□□□□□ -0.73
COMMD4-205ENST00000562310 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
COMMD4-205ENST00000562310 MRPL18Q9H0U6 180 aaKnown RBP10.51□□□□□ -0.73
COMMD4-205ENST00000562310 TRGV11A0A075B6L2 103 aa10.5□□□□□ -0.73
COMMD4-205ENST00000562310 CRXO43186 299 aaPredicted RBP10.5□□□□□ -0.73
COMMD4-205ENST00000562310 IGLL1P15814 213 aa10.5□□□□□ -0.73
COMMD4-205ENST00000562310 S100A4P26447 101 aaKnown RBP10.5□□□□□ -0.73
COMMD4-205ENST00000562310 CAMPP49913 170 aa10.5□□□□□ -0.73
COMMD4-205ENST00000562310 PRR31Q5SQ13 230 aa10.5□□□□□ -0.73
COMMD4-205ENST00000562310 Q6ZQT7 251 aa10.5□□□□□ -0.73
COMMD4-205ENST00000562310 ZNF575Q86XF7 245 aa10.5□□□□□ -0.73
COMMD4-205ENST00000562310 LINC00467Q9BRT7 94 aa10.5□□□□□ -0.73
COMMD4-205ENST00000562310 C1QTNF4Q9BXJ3 329 aa10.5□□□□□ -0.73
COMMD4-205ENST00000562310 ZMAT5Q9UDW3 170 aaKnown RBP10.5□□□□□ -0.73
COMMD4-205ENST00000562310 H3BVH4 76 aa10.49□□□□□ -0.73
COMMD4-205ENST00000562310 PHOX2AO14813 284 aa10.49□□□□□ -0.73
COMMD4-205ENST00000562310 FXYD7P58549 80 aa10.49□□□□□ -0.73
COMMD4-205ENST00000562310 FABP9Q0Z7S8 132 aa10.49□□□□□ -0.73
COMMD4-205ENST00000562310 TMEM256Q8N2U0 113 aa10.49□□□□□ -0.73
COMMD4-205ENST00000562310 IGHV4-4A0A075B6R2 117 aa10.48□□□□□ -0.73
COMMD4-205ENST00000562310 APCSP02743 223 aa10.48□□□□□ -0.73
COMMD4-205ENST00000562310 STAB1Q9NY15 2570 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST1H2BKO60814 126 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST1H2BJP06899 126 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 FRMD6-AS1P0C7T7 363 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST1H2BOP23527 126 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST1H2BBP33778 126 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST1H2BDP58876 126 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST1H2BCP62807 126 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 TWIST1Q15672 202 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST2H2BEQ16778 126 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.47□□□□□ -0.73
COMMD4-205ENST00000562310 ZNF493Q6ZR52 646 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 ZFP82Q8N141 532 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST1H2BHQ93079 126 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST1H2BNQ99877 126 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 HIST1H2BMQ99879 126 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 WFDC10AQ9H1F0 79 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 SCRT2Q9NQ03 307 aa10.47□□□□□ -0.73
COMMD4-205ENST00000562310 TRGC1P0CF51 173 aa10.46□□□□□ -0.73
COMMD4-205ENST00000562310 RBMY1A1P0DJD3 496 aaKnown RBP10.46□□□□□ -0.73
COMMD4-205ENST00000562310 RBMY1CP0DJD4 496 aa10.46□□□□□ -0.73
COMMD4-205ENST00000562310 RBMY1FQ15415 496 aaKnown RBP10.46□□□□□ -0.73
COMMD4-205ENST00000562310 SPANXN1Q5VSR9 72 aa10.46□□□□□ -0.73
COMMD4-205ENST00000562310 SMIM15Q7Z3B0 74 aa10.46□□□□□ -0.73
COMMD4-205ENST00000562310 OR10AG1Q8NH19 301 aa10.46□□□□□ -0.73
COMMD4-205ENST00000562310 PHLDA3Q9Y5J5 127 aa10.46□□□□□ -0.73
COMMD4-205ENST00000562310 IGHV3-16A0A0C4DH30 117 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 CBY3A6NI87 242 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 GNRH2O43555 120 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 NXPH4O95158 308 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 S100A6P06703 90 aa10.45□□□□□ -0.74
COMMD4-205ENST00000562310 RNASE3P12724 160 aaKnown RBP10.45□□□□□ -0.74
COMMD4-205ENST00000562310 NTF3P20783 257 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms