RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 ORM1P02763 201 aa16.43■□□□□ 0.22
SYNGR3-202ENST00000562045 NUTF2P61970 127 aaKnown RBP16.43■□□□□ 0.22
SYNGR3-202ENST00000562045 RPL19P84098 196 aaKnown RBP16.43■□□□□ 0.22
SYNGR3-202ENST00000562045 ELOBQ15370 118 aa16.43■□□□□ 0.22
SYNGR3-202ENST00000562045 GFI1BQ5VTD9 330 aa16.43■□□□□ 0.22
SYNGR3-202ENST00000562045 SMIM27A0A1W2PRY6 76 aa16.42■□□□□ 0.22
SYNGR3-202ENST00000562045 RPL35AP18077 110 aaKnown RBP16.42■□□□□ 0.22
SYNGR3-202ENST00000562045 RPS20P60866 119 aaKnown RBP16.42■□□□□ 0.22
SYNGR3-202ENST00000562045 GFRA4Q9GZZ7 299 aa16.42■□□□□ 0.22
SYNGR3-202ENST00000562045 TRAV12-2A0A075B6T6 113 aa16.42■□□□□ 0.22
SYNGR3-202ENST00000562045 FAM231BA6NCW3 169 aa16.42■□□□□ 0.22
SYNGR3-202ENST00000562045 FAM3BP58499 235 aaPredicted RBP16.42■□□□□ 0.22
SYNGR3-202ENST00000562045 AMBPP02760 352 aa16.41■□□□□ 0.22
SYNGR3-202ENST00000562045 FXYD7P58549 80 aa16.41■□□□□ 0.22
SYNGR3-202ENST00000562045 YPEL4Q96NS1 127 aa16.41■□□□□ 0.22
SYNGR3-202ENST00000562045 LOC102724200A0A096LPH7 203 aaPredicted RBP16.4■□□□□ 0.22
SYNGR3-202ENST00000562045 TRAV12-3A0A0B4J271 114 aa16.4■□□□□ 0.22
SYNGR3-202ENST00000562045 A0A1W2PPQ1 181 aa16.4■□□□□ 0.22
SYNGR3-202ENST00000562045 Q6ZQT7 251 aa16.4■□□□□ 0.22
SYNGR3-202ENST00000562045 NEU1Q99519 415 aa16.4■□□□□ 0.22
SYNGR3-202ENST00000562045 C11orf21Q9P2W6 132 aa16.4■□□□□ 0.22
SYNGR3-202ENST00000562045 NAT8BQ9UHF3 227 aa16.4■□□□□ 0.22
SYNGR3-202ENST00000562045 TRAV9-1A0A075B6T8 112 aa16.39■□□□□ 0.21
SYNGR3-202ENST00000562045 TMSB15BA0A087X1C1 80 aa16.39■□□□□ 0.21
SYNGR3-202ENST00000562045 IGKV3D-20A0A0C4DH25 116 aa16.39■□□□□ 0.21
SYNGR3-202ENST00000562045 TCL1AP56279 114 aa16.39■□□□□ 0.21
SYNGR3-202ENST00000562045 CRXO43186 299 aaPredicted RBP16.39■□□□□ 0.21
SYNGR3-202ENST00000562045 ZNF324O75467 553 aaPredicted RBP16.39■□□□□ 0.21
SYNGR3-202ENST00000562045 BTF3L4Q96K17 158 aa16.39■□□□□ 0.21
SYNGR3-202ENST00000562045 RETNQ9HD89 108 aa16.39■□□□□ 0.21
SYNGR3-202ENST00000562045 NAGKQ9UJ70 344 aa16.39■□□□□ 0.21
SYNGR3-202ENST00000562045 TRBV24-1A0A075B6N3 115 aa16.38■□□□□ 0.21
SYNGR3-202ENST00000562045 HIGD1CA8MV81 97 aa16.38■□□□□ 0.21
SYNGR3-202ENST00000562045 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.38■□□□□ 0.21
SYNGR3-202ENST00000562045 COLCA2A8K830 154 aa16.37■□□□□ 0.21
SYNGR3-202ENST00000562045 GZMBP10144 247 aa16.37■□□□□ 0.21
SYNGR3-202ENST00000562045 FAM159AQ6UWV7 190 aa16.37■□□□□ 0.21
SYNGR3-202ENST00000562045 GTSF1Q8WW33 167 aa16.37■□□□□ 0.21
SYNGR3-202ENST00000562045 TM2D3Q9BRN9 247 aa16.37■□□□□ 0.21
SYNGR3-202ENST00000562045 TGIF2-C20orf24A0A0A6YYL0 155 aa16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 INSP01308 110 aa16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 FOXA3P55318 350 aaPredicted RBP16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 MORN3Q6PF18 240 aaPredicted RBP16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 C20orf144Q9BQM9 153 aa16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 PYGO2Q9BRQ0 406 aa16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 CXCL1P09341 107 aa16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 ANXA2RQ3ZCQ2 193 aa16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 MUC21Q5SSG8 566 aa16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 NUP35Q8NFH5 326 aa16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 KCNS1Q96KK3 526 aa16.36■□□□□ 0.21
SYNGR3-202ENST00000562045 TDRG1Q3Y452 100 aa16.34■□□□□ 0.21
SYNGR3-202ENST00000562045 ZNF575Q86XF7 245 aa16.34■□□□□ 0.21
SYNGR3-202ENST00000562045 FAM210BQ96KR6 192 aa16.34■□□□□ 0.21
SYNGR3-202ENST00000562045 XCL2Q9UBD3 114 aa16.34■□□□□ 0.21
SYNGR3-202ENST00000562045 GRIFINA4D1Z8 144 aa16.33■□□□□ 0.21
SYNGR3-202ENST00000562045 C1QTNF4Q9BXJ3 329 aa16.33■□□□□ 0.21
SYNGR3-202ENST00000562045 FER1L6-AS1Q8NA97 138 aa16.33■□□□□ 0.2
SYNGR3-202ENST00000562045 PGLYRP4Q96LB8 373 aa16.33■□□□□ 0.2
SYNGR3-202ENST00000562045 IGHV1OR15-1A0A075B7D0 117 aa16.32■□□□□ 0.2
SYNGR3-202ENST00000562045 GIG44P09565 113 aaPredicted RBP16.32■□□□□ 0.2
SYNGR3-202ENST00000562045 IGLC6P0CF74 106 aa16.32■□□□□ 0.2
SYNGR3-202ENST00000562045 NHLRC4P0CG21 123 aaPredicted RBP16.32■□□□□ 0.2
SYNGR3-202ENST00000562045 RBMY1A1P0DJD3 496 aaKnown RBP16.32■□□□□ 0.2
SYNGR3-202ENST00000562045 RBMY1CP0DJD4 496 aa16.32■□□□□ 0.2
SYNGR3-202ENST00000562045 RBMY1FQ15415 496 aaKnown RBP16.32■□□□□ 0.2
SYNGR3-202ENST00000562045 TPPP3Q9BW30 176 aa16.32■□□□□ 0.2
SYNGR3-202ENST00000562045 CSTL1Q9H114 145 aa16.31■□□□□ 0.2
SYNGR3-202ENST00000562045 KIR2DL5BA0A0G2JN68 375 aa16.31■□□□□ 0.2
SYNGR3-202ENST00000562045 KIR2DL5BA0A0G2JPC4 375 aa16.31■□□□□ 0.2
SYNGR3-202ENST00000562045 SPINK4O60575 86 aa16.31■□□□□ 0.2
SYNGR3-202ENST00000562045 RAB5AP20339 215 aa16.31■□□□□ 0.2
SYNGR3-202ENST00000562045 ASIPP42127 132 aa16.31■□□□□ 0.2
SYNGR3-202ENST00000562045 APOC4P55056 127 aa16.31■□□□□ 0.2
SYNGR3-202ENST00000562045 KIR2DL5AQ8N109 375 aa16.31■□□□□ 0.2
SYNGR3-202ENST00000562045 KIR2DL5BQ8NHK3 375 aa16.31■□□□□ 0.2
SYNGR3-202ENST00000562045 TYMSP04818 313 aa16.3■□□□□ 0.2
SYNGR3-202ENST00000562045 S100A4P26447 101 aaKnown RBP16.3■□□□□ 0.2
SYNGR3-202ENST00000562045 DEFB135Q30KP9 77 aa16.3■□□□□ 0.2
SYNGR3-202ENST00000562045 ATP5L2Q7Z4Y8 100 aa16.3■□□□□ 0.2
SYNGR3-202ENST00000562045 TMEM256Q8N2U0 113 aa16.3■□□□□ 0.2
SYNGR3-202ENST00000562045 BORCS7Q96B45 105 aa16.3■□□□□ 0.2
SYNGR3-202ENST00000562045 F2Z2F3 143 aa16.29■□□□□ 0.2
SYNGR3-202ENST00000562045 CTRLP40313 264 aa16.29■□□□□ 0.2
SYNGR3-202ENST00000562045 DNLZQ5SXM8 178 aa16.29■□□□□ 0.2
SYNGR3-202ENST00000562045 LYZL1Q6UWQ5 148 aa16.29■□□□□ 0.2
SYNGR3-202ENST00000562045 SPATA25Q9BR10 227 aa16.29■□□□□ 0.2
SYNGR3-202ENST00000562045 A0A1B0GUT8 65 aa16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 GNRH2O43555 120 aa16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 MRPL54Q6P161 138 aaKnown RBP16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 RCHY1Q96PM5 261 aa16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 LINC01587Q99440 93 aa16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 LINC00467Q9BRT7 94 aa16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 TMEM208Q9BTX3 173 aa16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 STAB2Q8WWQ8 2551 aa16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 MED14OSP0DP75 135 aa16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 OVOL2Q9BRP0 275 aa16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 ZMAT4Q9H898 229 aa16.28■□□□□ 0.2
SYNGR3-202ENST00000562045 TRGV11A0A075B6L2 103 aa16.27■□□□□ 0.19
SYNGR3-202ENST00000562045 OR5AL1P0C617 328 aa16.27■□□□□ 0.19
SYNGR3-202ENST00000562045 RASL11AQ6T310 242 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms