RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 DEFB108BQ8NET1 73 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 RBPMSQ93062 196 aaKnown RBP2.87□□□□□ -1.95
LRRC28-222ENST00000561431 BORCS8Q96FH0 119 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 VSIG2Q96IQ7 327 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 C2orf50Q96LR7 162 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 AP1S3Q96PC3 154 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 CCL13Q99616 98 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 TMEM243Q9BU79 118 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 ADAT1Q9BUB4 502 aaKnown RBP2.87□□□□□ -1.95
LRRC28-222ENST00000561431 FGF23Q9GZV9 251 aaPredicted RBP2.87□□□□□ -1.95
LRRC28-222ENST00000561431 RPRMQ9NS64 109 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 AP4S1Q9Y587 144 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 HEATR1Q9H583 2144 aaKnown RBP2.87□□□□□ -1.95
LRRC28-222ENST00000561431 ABCA1O95477 2261 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 MALRD1Q5VYJ5 2156 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 DEDDO75618 318 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 SNAPC5O75971 98 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 LHBP01229 141 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 TRGC2P03986 189 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 ETV6P41212 452 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF773Q6PK81 442 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 LYPD2Q6UXB3 125 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 LINC00299Q6ZSB3 139 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF826PQ6ZT77 177 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 PRNTQ86SH4 94 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 LINC00596Q86U02 117 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 YIPF7Q8N8F6 280 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 FER1L6-AS1Q8NA97 138 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 C5orf17Q8NAS9 161 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 C15orf40Q8WUR7 153 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 YPEL4Q96NS1 127 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 SPIN2AQ99865 258 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 SPIN2BQ9BPZ2 258 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 GGTLC1Q9BX51 225 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 MRPL32Q9BYC8 188 aaKnown RBP2.86□□□□□ -1.95
LRRC28-222ENST00000561431 TTTY10Q9BZA0 68 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 TAS2R8Q9NYW2 309 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 AK3Q9UIJ7 227 aa2.86□□□□□ -1.95
LRRC28-222ENST00000561431 F11RQ9Y624 299 aaKnown RBP2.86□□□□□ -1.95
LRRC28-222ENST00000561431 C7orf71A4D174 169 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 A8MUN3 132 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 FNDC10F2Z333 226 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 J3QRE1 110 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 LGALS9O00182 355 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 SERF1AO75920 110 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 IGHV3-48P01763 117 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 MT-ND4LP03901 98 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 SCGB1C2P0DMR2 95 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 IL3RAP26951 378 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 SRP14P37108 136 aaKnown RBP2.85□□□□□ -1.95
LRRC28-222ENST00000561431 RBM11P57052 281 aaKnown RBP2.85□□□□□ -1.95
LRRC28-222ENST00000561431 TPPP2P59282 170 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 S100A10P60903 97 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 COA6Q5JTJ3 125 aaKnown RBP2.85□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF322Q6U7Q0 402 aaPredicted RBP2.85□□□□□ -1.95
LRRC28-222ENST00000561431 LCN15Q6UWW0 184 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 ZDHHC22Q8N966 263 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 SUMF2Q8NBJ7 301 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 OR10AC1Q8NH08 325 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 SCGB1C1Q8TD33 95 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 TMEM158Q8WZ71 300 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 FAM104AQ969W3 186 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 TOMM6Q96B49 74 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 KCNS1Q96KK3 526 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 SLC25A2Q9BXI2 301 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 WDR61Q9GZS3 305 aaKnown RBP2.85□□□□□ -1.95
LRRC28-222ENST00000561431 PARP12Q9H0J9 701 aaKnown RBP2.85□□□□□ -1.95
LRRC28-222ENST00000561431 Q9H3A6 140 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 C11orf68Q9H3H3 251 aaKnown RBP2.85□□□□□ -1.95
LRRC28-222ENST00000561431 OTORQ9NRC9 128 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 NOP16Q9Y3C1 178 aaKnown RBP2.85□□□□□ -1.95
LRRC28-222ENST00000561431 MPC1Q9Y5U8 109 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 MEGF8Q7Z7M0 2845 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 ANK2Q01484 3957 aa2.85□□□□□ -1.95
LRRC28-222ENST00000561431 DYSFO75923 2080 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 TRAV9-1A0A075B6T8 112 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 IGHV3OR15-7A0A075B7D8 119 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 IRGMA1A4Y4 181 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 IGLL5B9A064 214 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 M0R1X1 148 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 PEX7O00628 323 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 KRASP01116 189 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 GYPAP02724 150 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 TFF1P04155 84 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF19P17023 458 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 LINC00313P59037 77 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 SNRPGP62308 76 aaKnown RBP2.84□□□□□ -1.95
LRRC28-222ENST00000561431 RPL23P62829 140 aaKnown RBP2.84□□□□□ -1.95
LRRC28-222ENST00000561431 GNB2P62879 340 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 PRR4Q16378 134 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 TMEM244Q5VVB8 128 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 AMTNQ6UX39 209 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 SLC35E3Q7Z769 313 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 TTC9CQ8N5M4 171 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 TMEM252Q8N6L7 170 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 C14orf178Q8N769 122 aaPredicted RBP2.84□□□□□ -1.95
LRRC28-222ENST00000561431 OR8B3Q8NGG8 313 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 OR5D14Q8NGL3 314 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 C18orf15Q96N68 181 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 OR8B2Q96RD0 313 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms