RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 KRBOX1C9JBD0 128 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 UBE2CO00762 179 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 GNRH2O43555 120 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 MGST1P10620 155 aaKnown RBP6.77□□□□□ -1.33
HERC1-206ENST00000559996 DEFA6Q01524 100 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 TDRG1Q3Y452 100 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 ANXA2RQ3ZCQ2 193 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 DEFB121Q5J5C9 76 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 FAM162BQ5T6X4 162 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 Q6ZWC4 215 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 NIPSNAP3BQ9BS92 247 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 INSP01308 110 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 APOC4P55056 127 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 RPL19P84098 196 aaKnown RBP6.76□□□□□ -1.33
HERC1-206ENST00000559996 DNLZQ5SXM8 178 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 PRR27Q6MZM9 219 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 C11orf72Q8NBR9 251 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 MRAPQ8TCY5 172 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 NEU1Q99519 415 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 TM2D3Q9BRN9 247 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 C1QTNF4Q9BXJ3 329 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 OSTCQ9NRP0 149 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 V9GYV3 84 aa6.76□□□□□ -1.33
HERC1-206ENST00000559996 NBEAL2Q6ZNJ1 2754 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 IGHV1OR15-1A0A075B7D0 117 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 ZNF705GA8MUZ8 300 aaPredicted RBP6.75□□□□□ -1.33
HERC1-206ENST00000559996 SPRY2O43597 315 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 TYMSP04818 313 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 RNASE3P12724 160 aaKnown RBP6.75□□□□□ -1.33
HERC1-206ENST00000559996 PNRC1Q12796 327 aaPredicted RBP6.75□□□□□ -1.33
HERC1-206ENST00000559996 ADIRFQ15847 76 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 DEFB135Q30KP9 77 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 MUC21Q5SSG8 566 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 ATRAIDQ6UW56 229 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 CLRN3Q8NCR9 226 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 SFRP2Q96HF1 295 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 LINC01587Q99440 93 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 RETNQ9HD89 108 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 MDFICQ9P1T7 246 aa6.75□□□□□ -1.33
HERC1-206ENST00000559996 MEGF8Q7Z7M0 2845 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 PRKDCP78527 4128 aaKnown RBP6.74□□□□□ -1.33
HERC1-206ENST00000559996 H7BYZ3 331 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 APOC3P02656 99 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 RNF212Q495C1 297 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 IBA57Q5T440 356 aaKnown RBP6.74□□□□□ -1.33
HERC1-206ENST00000559996 TMEM256Q8N2U0 113 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 RNASE8Q8TDE3 154 aaKnown RBP6.74□□□□□ -1.33
HERC1-206ENST00000559996 B9D2Q9BPU9 175 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 PYGO2Q9BRQ0 406 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 BIN3Q9NQY0 253 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 TP53TG1Q9Y2A0 90 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 MUC4Q99102 2169 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 DNAH9Q9NYC9 4486 aa6.74□□□□□ -1.33
HERC1-206ENST00000559996 HUWE1Q7Z6Z7 4374 aaKnown RBP6.73□□□□□ -1.33
HERC1-206ENST00000559996 IGHV3OR16-12A0A075B7B8 117 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 IGHV3-16A0A0C4DH30 117 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 C7orf77A4D0Y5 90 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 GRIFINA4D1Z8 144 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 M0R036 132 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 ORM1P02763 201 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 IGLC6P0CF74 106 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 GZMBP10144 247 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 FOXA3P55318 350 aaPredicted RBP6.73□□□□□ -1.33
HERC1-206ENST00000559996 ERVFC1-1P60608 527 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 Q8NAQ8 132 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 OR10G8Q8NGN5 311 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 OR11H2Q8NH07 326 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 IL17DQ8TAD2 202 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 GTSF1Q8WW33 167 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 RCHY1Q96PM5 261 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 SCRT2Q9NQ03 307 aa6.73□□□□□ -1.33
HERC1-206ENST00000559996 TMSB15BA0A087X1C1 80 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 TMEM189A5PLL7 270 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 SMIM9A6NGZ8 99 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 B4DEV8 164 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 GATCO43716 136 aaKnown RBP6.72□□□□□ -1.33
HERC1-206ENST00000559996 ATP6V1G1O75348 118 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 P01737 135 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 CXCL1P09341 107 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 CT83Q5H943 113 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 FAM159AQ6UWV7 190 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 OR2D3Q8NGH3 330 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 DAZAP1Q96EP5 407 aaKnown RBP6.72□□□□□ -1.33
HERC1-206ENST00000559996 C9orf85Q96MD7 179 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 RPP21Q9H633 154 aaKnown RBP6.72□□□□□ -1.33
HERC1-206ENST00000559996 GOLT1BQ9Y3E0 138 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 TENM3Q9P273 2699 aa6.72□□□□□ -1.33
HERC1-206ENST00000559996 SMIM27A0A1W2PRY6 76 aa6.71□□□□□ -1.34
HERC1-206ENST00000559996 SNAI2O43623 268 aa6.71□□□□□ -1.34
HERC1-206ENST00000559996 HTN1P15515 57 aa6.71□□□□□ -1.34
HERC1-206ENST00000559996 ANAPC16Q96DE5 110 aa6.71□□□□□ -1.34
HERC1-206ENST00000559996 KCNS1Q96KK3 526 aa6.71□□□□□ -1.34
HERC1-206ENST00000559996 GSN-AS1Q9NRJ2 163 aa6.71□□□□□ -1.34
HERC1-206ENST00000559996 TMEM242Q9NWH2 141 aa6.71□□□□□ -1.34
HERC1-206ENST00000559996 NAGKQ9UJ70 344 aa6.71□□□□□ -1.34
HERC1-206ENST00000559996 A0A087WWC5 75 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 IGHV4-28A0A0C4DH34 117 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 CBY3A6NI87 242 aa6.7□□□□□ -1.34
HERC1-206ENST00000559996 ARMS2P0C7Q2 107 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms