RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 LY96Q9Y6Y9 160 aa7.88□□□□□ -1.15
USP3-214ENST00000559718 TRGV11A0A075B6L2 103 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 A0A087WTM6 91 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 PGPA6NDG6 321 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 EPM2AB3EWF7 344 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 MPC2O95563 127 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 KRTAP10-1P60331 282 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 CYCSP99999 105 aaKnown RBP7.87□□□□□ -1.15
USP3-214ENST00000559718 KHDC3LQ587J8 217 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 LINC00299Q6ZSB3 139 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 TVP23CQ96ET8 276 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 SPXQ9BT56 116 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 WFDC1Q9HC57 220 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 MSRB1Q9NZV6 116 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 LENEPQ9Y5L5 61 aa7.87□□□□□ -1.15
USP3-214ENST00000559718 TRAV8-1A0A0A6YYK1 113 aa7.86□□□□□ -1.15
USP3-214ENST00000559718 IGHV3-16A0A0C4DH30 117 aa7.86□□□□□ -1.15
USP3-214ENST00000559718 F6UZH7 168 aa7.86□□□□□ -1.15
USP3-214ENST00000559718 TAS2R45P59539 299 aa7.86□□□□□ -1.15
USP3-214ENST00000559718 GOLT1AQ6ZVE7 132 aa7.86□□□□□ -1.15
USP3-214ENST00000559718 NFE4Q86UQ8 179 aa7.86□□□□□ -1.15
USP3-214ENST00000559718 SCGB1C1Q8TD33 95 aa7.86□□□□□ -1.15
USP3-214ENST00000559718 PCNPQ8WW12 178 aaKnown RBP7.86□□□□□ -1.15
USP3-214ENST00000559718 OTORQ9NRC9 128 aa7.86□□□□□ -1.15
USP3-214ENST00000559718 MBD2Q9UBB5 411 aa7.86□□□□□ -1.15
USP3-214ENST00000559718 TRAV9-2A0A087WT02 112 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 TRAV4A0A0B4J268 109 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 M0R2P5 195 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 HMGB3O15347 200 aaKnown RBP7.85□□□□□ -1.15
USP3-214ENST00000559718 IFNA5P01569 189 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 ORM1P02763 201 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 RPL12P30050 165 aaKnown RBP7.85□□□□□ -1.15
USP3-214ENST00000559718 GNG5P63218 68 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 TDRG1Q3Y452 100 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 OR4C5Q8NGB2 326 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 CMTM2Q8TAZ6 248 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 TMED6Q8WW62 240 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 MARVELD1Q9BSK0 173 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 PTTG2Q9NZH5 202 aa7.85□□□□□ -1.15
USP3-214ENST00000559718 TMEM238LA0A1B0GVL6 79 aa7.84□□□□□ -1.15
USP3-214ENST00000559718 C9JCJ5 164 aa7.84□□□□□ -1.15
USP3-214ENST00000559718 SSNA1O43805 119 aa7.84□□□□□ -1.15
USP3-214ENST00000559718 TYMSP04818 313 aa7.84□□□□□ -1.15
USP3-214ENST00000559718 EVI2AP22794 236 aa7.84□□□□□ -1.15
USP3-214ENST00000559718 RAB2AP61019 212 aa7.84□□□□□ -1.15
USP3-214ENST00000559718 SGK494Q96LW2 274 aa7.84□□□□□ -1.15
USP3-214ENST00000559718 TXNDC17Q9BRA2 123 aa7.84□□□□□ -1.15
USP3-214ENST00000559718 TREM1Q9NP99 234 aa7.84□□□□□ -1.15
USP3-214ENST00000559718 TRAV21A0A0B4J279 112 aa7.83□□□□□ -1.16
USP3-214ENST00000559718 CRYGDP07320 174 aa7.83□□□□□ -1.16
USP3-214ENST00000559718 PET100P0DJ07 73 aa7.83□□□□□ -1.16
USP3-214ENST00000559718 GATA1P15976 413 aaPredicted RBP7.83□□□□□ -1.16
USP3-214ENST00000559718 HAMPP81172 84 aa7.83□□□□□ -1.16
USP3-214ENST00000559718 ACOT6Q3I5F7 207 aaPredicted RBP7.83□□□□□ -1.16
USP3-214ENST00000559718 NHLRC2Q8NBF2 726 aa7.83□□□□□ -1.16
USP3-214ENST00000559718 HERC1Q15751 4861 aa7.83□□□□□ -1.16
USP3-214ENST00000559718 A0A1W2PPV4 95 aa7.82□□□□□ -1.16
USP3-214ENST00000559718 FAM74A1Q5RGS3 127 aa7.82□□□□□ -1.16
USP3-214ENST00000559718 Q5VSD8 79 aa7.82□□□□□ -1.16
USP3-214ENST00000559718 DPPA3Q6W0C5 159 aa7.82□□□□□ -1.16
USP3-214ENST00000559718 PQLC2Q6ZP29 291 aa7.82□□□□□ -1.16
USP3-214ENST00000559718 SDF2L1Q9HCN8 221 aa7.82□□□□□ -1.16
USP3-214ENST00000559718 C11orf21Q9P2W6 132 aa7.82□□□□□ -1.16
USP3-214ENST00000559718 IGHV3-38A0A0C4DH36 116 aa7.81□□□□□ -1.16
USP3-214ENST00000559718 K7EP13 123 aa7.81□□□□□ -1.16
USP3-214ENST00000559718 SMR3BP02814 79 aaPredicted RBP7.81□□□□□ -1.16
USP3-214ENST00000559718 ARL14EPLP0DKL9 152 aa7.81□□□□□ -1.16
USP3-214ENST00000559718 INAFM2P0DMQ5 153 aa7.81□□□□□ -1.16
USP3-214ENST00000559718 GCSHP23434 173 aa7.81□□□□□ -1.16
USP3-214ENST00000559718 PPT1P50897 306 aa7.81□□□□□ -1.16
USP3-214ENST00000559718 ZNF80P51504 273 aaPredicted RBP7.81□□□□□ -1.16
USP3-214ENST00000559718 OR10G9Q8NGN4 311 aa7.81□□□□□ -1.16
USP3-214ENST00000559718 OR10G7Q8NGN6 311 aa7.81□□□□□ -1.16
USP3-214ENST00000559718 ASB13Q8WXK3 278 aa7.81□□□□□ -1.16
USP3-214ENST00000559718 IGHV3-73A0A0B4J1V6 119 aa7.8□□□□□ -1.16
USP3-214ENST00000559718 LRCOL1A6NCL2 159 aa7.8□□□□□ -1.16
USP3-214ENST00000559718 FBLL1A6NHQ2 334 aaKnown RBP7.8□□□□□ -1.16
USP3-214ENST00000559718 TIRAPP58753 221 aa7.8□□□□□ -1.16
USP3-214ENST00000559718 C10orf126Q8N4M7 172 aa7.8□□□□□ -1.16
USP3-214ENST00000559718 ARL6IP6Q8N6S5 226 aa7.8□□□□□ -1.16
USP3-214ENST00000559718 SLC25A29Q8N8R3 303 aa7.8□□□□□ -1.16
USP3-214ENST00000559718 TMEM75Q8N9X5 138 aa7.8□□□□□ -1.16
USP3-214ENST00000559718 ZNF876PQ49A33 203 aa7.79□□□□□ -1.16
USP3-214ENST00000559718 LINC01556Q5JQF7 62 aa7.79□□□□□ -1.16
USP3-214ENST00000559718 CFAP126Q5VTH2 177 aa7.79□□□□□ -1.16
USP3-214ENST00000559718 SH2D6Q7Z4S9 175 aa7.79□□□□□ -1.16
USP3-214ENST00000559718 FRZBQ92765 325 aa7.79□□□□□ -1.16
USP3-214ENST00000559718 KCNS1Q96KK3 526 aa7.79□□□□□ -1.16
USP3-214ENST00000559718 Q9HAA7 133 aa7.79□□□□□ -1.16
USP3-214ENST00000559718 IGLV5-52A0A0A0MRZ9 124 aa7.78□□□□□ -1.16
USP3-214ENST00000559718 PGPEP1LA6NFU8 196 aa7.78□□□□□ -1.16
USP3-214ENST00000559718 RS1O15537 224 aa7.78□□□□□ -1.16
USP3-214ENST00000559718 PSCAO43653 123 aa7.78□□□□□ -1.16
USP3-214ENST00000559718 IGLV2-11P01706 119 aa7.78□□□□□ -1.16
USP3-214ENST00000559718 IGHV3-30P01768 117 aa7.78□□□□□ -1.16
USP3-214ENST00000559718 IGHV3-33P01772 117 aa7.78□□□□□ -1.16
USP3-214ENST00000559718 TCRAP04437 139 aa7.78□□□□□ -1.16
USP3-214ENST00000559718 STAG3L2P0CL84 134 aa7.78□□□□□ -1.16
USP3-214ENST00000559718 STAG3L3P0CL85 134 aa7.78□□□□□ -1.16
USP3-214ENST00000559718 IGHV3-30-3P0DP02 117 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms