RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 C18orf15Q96N68 181 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 ICOSQ9Y6W8 199 aa5.7□□□□□ -1.5
SNX1-207ENST00000559401 MUC4Q99102 2169 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 A0A096LPF7 62 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 IGHV3-16A0A0C4DH30 117 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 A0A0D9SG52 128 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 NBDYA0A0U1RRE5 68 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 FBLL1A6NHQ2 334 aaKnown RBP5.69□□□□□ -1.5
SNX1-207ENST00000559401 FAM74A7A6NL05 159 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 HMSDA8MTL9 139 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 C9JCJ5 164 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 RTL8CO15255 209 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 BCL2L11O43521 198 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 PFN1P07737 140 aaKnown RBP5.69□□□□□ -1.5
SNX1-207ENST00000559401 FHITP49789 147 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 ZNF80P51504 273 aaPredicted RBP5.69□□□□□ -1.5
SNX1-207ENST00000559401 UBE2G1P62253 170 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 EIF5AP63241 154 aaKnown RBP5.69□□□□□ -1.5
SNX1-207ENST00000559401 SLAQ13239 276 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 TDRG1Q3Y452 100 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 SAPCD1Q5SSQ6 148 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 CST9LP1Q5W188 147 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 Q6ZR54 194 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 OR4C5Q8NGB2 326 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 OR11H4Q8NGC9 324 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 FAM213BQ8TBF2 198 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 PCNPQ8WW12 178 aaKnown RBP5.69□□□□□ -1.5
SNX1-207ENST00000559401 VSIG2Q96IQ7 327 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 LINC00479Q96M42 142 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 PRO0255Q9UI72 69 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 HHLA3Q9XRX5 114 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 ARL2-SNX15V9GYD0 113 aa5.69□□□□□ -1.5
SNX1-207ENST00000559401 M0R2P5 195 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 IGLV2-11P01706 119 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 SEC11BP0C7V7 166 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 CRYBA4P53673 196 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 FHL2Q14192 279 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 ESRGQ1W209 222 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 Q86TA4 180 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 HIST1H2BAQ96A08 127 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 ZNF479Q96JC4 524 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 NKX6-2Q9C056 277 aaPredicted RBP5.68□□□□□ -1.5
SNX1-207ENST00000559401 Q9H8V8 135 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 MRPS16Q9Y3D3 137 aaKnown RBP5.68□□□□□ -1.5
SNX1-207ENST00000559401 KMT2AQ03164 3969 aa5.68□□□□□ -1.5
SNX1-207ENST00000559401 VPS13DQ5THJ4 4388 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 TRAV4A0A0B4J268 109 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 UMAD1C9J7I0 102 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 PAGE4O60829 102 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 TPT1P13693 172 aaKnown RBP5.67□□□□□ -1.5
SNX1-207ENST00000559401 S100A4P26447 101 aaKnown RBP5.67□□□□□ -1.5
SNX1-207ENST00000559401 SRIP30626 198 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 AKR1C3P42330 323 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 MRPL23Q16540 153 aaKnown RBP5.67□□□□□ -1.5
SNX1-207ENST00000559401 ZNF876PQ49A33 203 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 TTC32Q5I0X7 151 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 Q6ZNX1 250 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 TMUB2Q71RG4 321 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 C6orf223Q8N319 242 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 SFT2D1Q8WV19 159 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 RASL10AQ92737 203 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 C11orf21Q9P2W6 132 aa5.67□□□□□ -1.5
SNX1-207ENST00000559401 hCG_2014768A0A024R1R8 64 aa5.66□□□□□ -1.5
SNX1-207ENST00000559401 FABP5P3A8MUU1 101 aa5.66□□□□□ -1.5
SNX1-207ENST00000559401 M0R036 132 aa5.66□□□□□ -1.5
SNX1-207ENST00000559401 ORM1P02763 201 aa5.66□□□□□ -1.5
SNX1-207ENST00000559401 H2AFB1P0C5Y9 115 aa5.66□□□□□ -1.5
SNX1-207ENST00000559401 GYPEP15421 78 aa5.66□□□□□ -1.5
SNX1-207ENST00000559401 NEGR1Q7Z3B1 354 aa5.66□□□□□ -1.5
SNX1-207ENST00000559401 NHLRC2Q8NBF2 726 aa5.66□□□□□ -1.5
SNX1-207ENST00000559401 FMC1Q96HJ9 113 aa5.66□□□□□ -1.5
SNX1-207ENST00000559401 IGHV3-73A0A0B4J1V6 119 aa5.65□□□□□ -1.5
SNX1-207ENST00000559401 B4DEV8 164 aa5.65□□□□□ -1.5
SNX1-207ENST00000559401 NXPH4O95158 308 aa5.65□□□□□ -1.5
SNX1-207ENST00000559401 ASIPP42127 132 aa5.65□□□□□ -1.5
SNX1-207ENST00000559401 DPPA3Q6W0C5 159 aa5.65□□□□□ -1.5
SNX1-207ENST00000559401 ZC2HC1AQ96GY0 325 aa5.65□□□□□ -1.5
SNX1-207ENST00000559401 TCEAL7Q9BRU2 100 aa5.65□□□□□ -1.5
SNX1-207ENST00000559401 UPK3BQ9BT76 320 aa5.65□□□□□ -1.5
SNX1-207ENST00000559401 ZFP30Q9Y2G7 519 aa5.65□□□□□ -1.5
SNX1-207ENST00000559401 TMSB15BA0A087X1C1 80 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 IGKV3D-20A0A0C4DH25 116 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 LOC100131303A0A0U1RQF7 123 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 A0A1B0GVG6 124 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 A0A1B0GVY2 172 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 GRIFINA4D1Z8 144 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 PGPEP1LA6NFU8 196 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 H3BVH4 76 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 K7EQD1 137 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 SIVA1O15304 175 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 SH2D1AO60880 128 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 LGALSLQ3ZCW2 172 aaPredicted RBP5.64□□□□□ -1.51
SNX1-207ENST00000559401 ZNF506Q5JVG8 444 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 FAM162BQ5T6X4 162 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 EIF5AL1Q6IS14 154 aaKnown RBP5.64□□□□□ -1.51
SNX1-207ENST00000559401 LYPD5Q6UWN5 251 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 MBD3L1Q8WWY6 194 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 C9orf85Q96MD7 179 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 TXNDC17Q9BRA2 123 aa5.64□□□□□ -1.51
SNX1-207ENST00000559401 KRTAP1-5Q9BYS1 174 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms