RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 GSN-AS1Q9NRJ2 163 aa8.92□□□□□ -0.98
GABPB1-208ENST00000558970 GRIFINA4D1Z8 144 aa8.91□□□□□ -0.98
GABPB1-208ENST00000558970 B4DEV8 164 aa8.91□□□□□ -0.98
GABPB1-208ENST00000558970 NANOS2P60321 138 aaKnown RBP8.91□□□□□ -0.98
GABPB1-208ENST00000558970 RPL19P84098 196 aaKnown RBP8.91□□□□□ -0.98
GABPB1-208ENST00000558970 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
GABPB1-208ENST00000558970 COMMD7Q86VX2 200 aa8.91□□□□□ -0.98
GABPB1-208ENST00000558970 OCC1Q8TAD7 63 aa8.91□□□□□ -0.98
GABPB1-208ENST00000558970 MLST8Q9BVC4 326 aa8.91□□□□□ -0.98
GABPB1-208ENST00000558970 EDA2RQ9HAV5 297 aa8.91□□□□□ -0.98
GABPB1-208ENST00000558970 SDF2L1Q9HCN8 221 aa8.91□□□□□ -0.98
GABPB1-208ENST00000558970 NOP10Q9NPE3 64 aaKnown RBP8.91□□□□□ -0.98
GABPB1-208ENST00000558970 MDFICQ9P1T7 246 aa8.91□□□□□ -0.98
GABPB1-208ENST00000558970 PLAC8L1A1L4L8 177 aa8.9□□□□□ -0.98
GABPB1-208ENST00000558970 K7EN84 100 aa8.9□□□□□ -0.98
GABPB1-208ENST00000558970 ZNF415Q09FC8 603 aa8.9□□□□□ -0.98
GABPB1-208ENST00000558970 C11orf45Q8TAV5 145 aa8.9□□□□□ -0.98
GABPB1-208ENST00000558970 TRGV11A0A075B6L2 103 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 IGKV3D-20A0A0C4DH25 116 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 TMEM189A5PLL7 270 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 CXorf65A6NEN9 183 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 C9JCJ5 164 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 SFTA3P0C7M3 94 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 DEFB130BP0DP73 79 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 DEFB130AP0DP74 79 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 S100A1P23297 94 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 ZNF493Q6ZR52 646 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 C11orf72Q8NBR9 251 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 IL17DQ8TAD2 202 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 DAZAP1Q96EP5 407 aaKnown RBP8.89□□□□□ -0.99
GABPB1-208ENST00000558970 KCNS1Q96KK3 526 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 WWC2-AS2Q96NR7 200 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 LINC00467Q9BRT7 94 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 MRPL16Q9NX20 251 aaKnown RBP8.89□□□□□ -0.99
GABPB1-208ENST00000558970 DKK2Q9UBU2 259 aa8.89□□□□□ -0.99
GABPB1-208ENST00000558970 IGHV3-16A0A0C4DH30 117 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 GAGE12BA1L429 117 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 KRBOX1C9JBD0 128 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 H3BVH4 76 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 GAGE7O76087 117 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 GAGE12FP0CL80 117 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 GAGE12GP0CL81 117 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 GAGE12IP0CL82 117 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 HTN3P15516 51 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 S100A4P26447 101 aaKnown RBP8.88□□□□□ -0.99
GABPB1-208ENST00000558970 SOHLH1Q5JUK2 328 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 COX8CQ7Z4L0 72 aa8.88□□□□□ -0.99
GABPB1-208ENST00000558970 RNASE7Q9H1E1 156 aaKnown RBP8.88□□□□□ -0.99
GABPB1-208ENST00000558970 TRGV1A0A0A0MS02 117 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 P01737 135 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 GZMBP10144 247 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 ASIPP42127 132 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 TCL1AP56279 114 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 DAD1P61803 113 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 ADIRFQ15847 76 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 TDRG1Q3Y452 100 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 Q6ZTC4 211 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 Q6ZTI0 123 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 SMDT1Q9H4I9 107 aa8.87□□□□□ -0.99
GABPB1-208ENST00000558970 ATP6V1G1O75348 118 aa8.86□□□□□ -0.99
GABPB1-208ENST00000558970 SSTP61278 116 aa8.86□□□□□ -0.99
GABPB1-208ENST00000558970 TMEM241Q24JQ0 296 aa8.86□□□□□ -0.99
GABPB1-208ENST00000558970 C12orf74Q32Q52 190 aa8.86□□□□□ -0.99
GABPB1-208ENST00000558970 LINC01559Q495D7 138 aa8.86□□□□□ -0.99
GABPB1-208ENST00000558970 IBA57Q5T440 356 aaKnown RBP8.86□□□□□ -0.99
GABPB1-208ENST00000558970 LINC01551Q86U37 167 aa8.86□□□□□ -0.99
GABPB1-208ENST00000558970 OR2D3Q8NGH3 330 aa8.86□□□□□ -0.99
GABPB1-208ENST00000558970 SMIM12Q96EX1 92 aa8.86□□□□□ -0.99
GABPB1-208ENST00000558970 MUC4Q99102 2169 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 MUC21A0A0G2JKD1 596 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 MUC21A0A140T8X8 626 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 LINC00862A6NCI5 91 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 C19orf71A6NCJ1 209 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 LYRM9A8MSI8 78 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 NDUFS6O75380 124 aaKnown RBP8.85□□□□□ -0.99
GABPB1-208ENST00000558970 RNASE3P12724 160 aaKnown RBP8.85□□□□□ -0.99
GABPB1-208ENST00000558970 ERVFC1-1P60608 527 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 RPL23P62829 140 aaKnown RBP8.85□□□□□ -0.99
GABPB1-208ENST00000558970 FAM74A3Q4VXF1 159 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 NUDT10Q8NFP7 164 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 NUDT11Q96G61 164 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 TPPP3Q9BW30 176 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 BIN3Q9NQY0 253 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 NAT8Q9UHE5 227 aa8.85□□□□□ -0.99
GABPB1-208ENST00000558970 STAB2Q8WWQ8 2551 aa8.84□□□□□ -0.99
GABPB1-208ENST00000558970 TRGV2A0A075B6R0 118 aa8.84□□□□□ -0.99
GABPB1-208ENST00000558970 IGHV3-53P01767 116 aa8.84□□□□□ -0.99
GABPB1-208ENST00000558970 ARMS2P0C7Q2 107 aa8.84□□□□□ -0.99
GABPB1-208ENST00000558970 RPP21Q9H633 154 aaKnown RBP8.84□□□□□ -0.99
GABPB1-208ENST00000558970 F8W036 122 aa8.83□□□□□ -1
GABPB1-208ENST00000558970 GATCO43716 136 aaKnown RBP8.83□□□□□ -1
GABPB1-208ENST00000558970 SPINK4O60575 86 aa8.83□□□□□ -1
GABPB1-208ENST00000558970 DAZ2Q13117 558 aaKnown RBP8.83□□□□□ -1
GABPB1-208ENST00000558970 UQCC3Q6UW78 93 aa8.83□□□□□ -1
GABPB1-208ENST00000558970 MUC7Q8TAX7 377 aa8.83□□□□□ -1
GABPB1-208ENST00000558970 C9orf85Q96MD7 179 aa8.83□□□□□ -1
GABPB1-208ENST00000558970 LY96Q9Y6Y9 160 aa8.83□□□□□ -1
GABPB1-208ENST00000558970 TEX48A0A1B0GUV7 120 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms