RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 TAS2R60P59551 318 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 SURF2Q15527 256 aaPredicted RBP3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 Q5VSD8 79 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 LYPD1Q8N2G4 141 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 TMEM256Q8N2U0 113 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 OR8A1Q8NGG7 326 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 OR51S1Q8NGJ8 323 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 RXFP4Q8TDU9 374 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 GTSF1Q8WW33 167 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 AP3S1Q92572 193 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 IL22RA2Q969J5 263 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 C16orf74Q96GX8 76 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 VSIG2Q96IQ7 327 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 UPK3BQ9BT76 320 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 TMEM147Q9BVK8 224 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 PARD6GQ9BYG4 376 aaPredicted RBP3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 C20orf85Q9H1P6 137 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 MIXL1Q9H2W2 232 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 VCX3AQ9NNX9 186 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 CACFD1Q9UGQ2 172 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 MRPS16Q9Y3D3 137 aaKnown RBP3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 FAT1Q14517 4588 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 VPS13BQ7Z7G8 4022 aa3.66□□□□□ -1.82
HNRNPC-233ENST00000557768 MYCBP2O75592 4640 aa3.65□□□□□ -1.82
HNRNPC-233ENST00000557768 A0A0B4J2A0 478 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 FAM231BA6NCW3 169 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 SIVA1O15304 175 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 SNAPINO95295 136 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 CFDP00746 253 aaPredicted RBP3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 SMR3BP02814 79 aaPredicted RBP3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 AKAIN1P0CW23 69 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 KRTAP10-1P60331 282 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 HAMPP81172 84 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 AKR1C1Q04828 323 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 PSG3Q16557 428 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 Q6ZRN7 208 aaPredicted RBP3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 CLVS1Q8IUQ0 354 aaPredicted RBP3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 INO80EQ8NBZ0 244 aaPredicted RBP3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 OR10J6PQ8NGY7 276 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 TMEM263Q8WUH6 116 aaKnown RBP3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 C15orf40Q8WUR7 153 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 FRZBQ92765 325 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 GPR82Q96P67 336 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 KIR2DL4Q99706 377 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 PRRT1Q99946 306 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 NAA50Q9GZZ1 169 aaKnown RBP3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 GFRA4Q9GZZ7 299 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 SHPKQ9UHJ6 478 aa3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 SRRM2Q9UQ35 2752 aaKnown RBP3.65□□□□□ -1.83
HNRNPC-233ENST00000557768 H3BP45 60 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 H3BRN7 92 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 AGPAT2O15120 278 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 RGS5O15539 181 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 PITX3O75364 302 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 ADAP1O75689 374 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 EIF3GO75821 320 aaKnown RBP eCLIP3.64□□□□□ -1.834e-12■■■□□ 16.7
HNRNPC-233ENST00000557768 RLN2P04090 185 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 OR5G3P0C626 314 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 DNAH10OSP0CZ25 163 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 CXCL3P19876 107 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 SSBP1Q04837 148 aaKnown RBP3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 Q1RN00 199 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 SPANXN5Q5MJ07 72 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 ZNF493Q6ZR52 646 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 CYP2G1PQ6ZSU1 146 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 Q6ZTI0 123 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 KRTAP7-1Q8IUC3 87 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 LINC00612Q8N6U2 182 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 HSD17B11Q8NBQ5 300 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 LRRC20Q8TCA0 184 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 SMIM4Q8WVI0 70 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 RPUSD4Q96CM3 377 aaKnown RBP3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 SHANK2-AS3Q9BTD1 123 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 MCUBQ9NWR8 336 aa3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 CCDC59Q9P031 241 aaKnown RBP3.64□□□□□ -1.83
HNRNPC-233ENST00000557768 A0A096LPF7 62 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 TRAV12-3A0A0B4J271 114 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 ANKRD20A5PA0PJZ0 165 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 H3BNG1 76 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 H7BYZ3 331 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 MRPS12O15235 138 aaKnown RBP3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 SYNGR2O43760 224 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 HYPMO75409 117 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 IL5P05113 134 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 RPL7P18124 248 aaKnown RBP3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 S100A7P31151 101 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 UBE2MP61081 183 aaKnown RBP3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 MRPS10P82664 201 aaKnown RBP3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 HIGD2BQ4VC39 106 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 TMED4Q7Z7H5 227 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 C18orf15Q96N68 181 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 SCP2D1Q9UJQ7 156 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 FLVCR2Q9UPI3 526 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 HIGD1AQ9Y241 93 aa3.63□□□□□ -1.83
HNRNPC-233ENST00000557768 TRGV2A0A075B6R0 118 aa3.62□□□□□ -1.83
HNRNPC-233ENST00000557768 A0A087WTM6 91 aa3.62□□□□□ -1.83
HNRNPC-233ENST00000557768 HSBP1O75506 76 aa3.62□□□□□ -1.83
HNRNPC-233ENST00000557768 MED6O75586 246 aa3.62□□□□□ -1.83
HNRNPC-233ENST00000557768 CCNKO75909 580 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms