RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CSTL1Q9H114 145 aa8.37□□□□□ -1.07
TGFBR1-209ENST00000552516 IGLV11-55A0A075B6I3 123 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 MIEN1Q9BRT3 115 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 COL4A2P08572 1712 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 CRYBG3Q68DQ2 2970 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 M0QZK8 103 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 UBE2L6O14933 153 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 FOSL1P15407 271 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 OR11H12B2RN74 326 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 OR11H2Q8NH07 326 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 C1orf159Q96HA4 380 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 ALKBH7Q9BT30 221 aaPredicted RBP8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 GAGE10A6NGK3 116 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 TNFRSF6BO95407 300 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 AVPP01185 164 aa8.36□□□□□ -1.07
TGFBR1-209ENST00000552516 OOSP1A8MZH6 123 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 YPEL3P61236 119 aaPredicted RBP8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 SMR3AQ99954 134 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 ITPR1Q14643 2758 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 PAX1P15863 534 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 TRAV9-2A0A087WT02 112 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 SYS1-DBNDD2H3BUS1 97 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 GEMIN7Q9H840 131 aaKnown RBP8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 DEFB4AO15263 64 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 ZNF80P51504 273 aaPredicted RBP8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 ZC2HC1BQ5TFG8 222 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 C5orf56Q8N8D9 126 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 SIRPDQ9H106 197 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 ST20Q9HBF5 79 aa8.35□□□□□ -1.07
TGFBR1-209ENST00000552516 ADARB2-AS1A8MUL3 147 aa8.34□□□□□ -1.07
TGFBR1-209ENST00000552516 RPL39LQ96EH5 51 aaKnown RBP8.34□□□□□ -1.07
TGFBR1-209ENST00000552516 TTC9CQ8N5M4 171 aa8.34□□□□□ -1.07
TGFBR1-209ENST00000552516 NCOR1P1Q9H4R4 102 aa8.34□□□□□ -1.07
TGFBR1-209ENST00000552516 CYSLTR1Q9Y271 337 aa8.34□□□□□ -1.07
TGFBR1-209ENST00000552516 PRSS46E5RG02 174 aa8.34□□□□□ -1.07
TGFBR1-209ENST00000552516 J3QKU1 62 aa8.34□□□□□ -1.07
TGFBR1-209ENST00000552516 DKK2Q9UBU2 259 aa8.34□□□□□ -1.07
TGFBR1-209ENST00000552516 HERVK_113P61574 105 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 DTX2Q86UW9 622 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 SIGLEC8Q9NYZ4 499 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 SMIM27A0A1W2PRY6 76 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 IGLL1P15814 213 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 SRSF1Q07955 248 aaKnown RBP eCLIP8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 LOXL1Q08397 574 aaPredicted RBP8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 MEIG1Q5JSS6 88 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 C18orf65Q6ZTR6 163 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 BBC3Q96PG8 261 aaPredicted RBP8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 A8MWP6 167 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 SLC25A16P16260 332 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 LGALS3P17931 250 aaKnown RBP8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 C9orf139Q6ZV77 190 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 SNHG12Q9BXW3 62 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 IGHV4OR15-8A0A075B7B6 117 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 A0A087WW49 117 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 PRORYQ9H606 182 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 TRAV13-1A0A0B4J241 112 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 GDF5OSQ5U4N7 250 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 C11orf52Q96A22 123 aa8.33□□□□□ -1.08
TGFBR1-209ENST00000552516 BUB3O43684 328 aa8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 MRPL16Q9NX20 251 aaKnown RBP8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 PEMTQ9UBM1 199 aa8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 GTF2H5Q6ZYL4 71 aa8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 CCDC140Q96MF4 163 aa8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 FNDC10F2Z333 226 aa8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 OR2K2Q8NGT1 345 aa8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 MS4A6AQ9H2W1 248 aa8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 SMG1Q96Q15 3661 aaKnown RBP8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 TRGV4A0A0C4DH28 118 aa8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 LTAP01374 205 aa8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
TGFBR1-209ENST00000552516 TRAV2A0A0B4J234 112 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 A6NDN8 102 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 CLPSL2Q6UWE3 100 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 MRPL27Q9P0M9 148 aaKnown RBP8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 NPIPB6E9PJ23 425 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 OVOL1O14753 267 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 NUTF2P61970 127 aaKnown RBP8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 FAM104BQ5XKR9 115 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 SPXQ9BT56 116 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 MRAP2Q96G30 205 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 IGF2BP2-AS1Q96M15 143 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 CD28P10747 220 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 DEFB113Q30KQ7 82 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 C19orf54Q5BKX5 351 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 C1orf194Q5T5A4 169 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 USMG5Q96IX5 58 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 FAM223BA6NKX1 122 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 FAM223AQ8IWN6 122 aa8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 UTP20O75691 2785 aaKnown RBP8.31□□□□□ -1.08
TGFBR1-209ENST00000552516 Q6AWC8 147 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 VCX2Q9H322 139 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 GAGE12BA1L429 117 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 GAGE7O76087 117 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 GAGE12FP0CL80 117 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 GAGE12GP0CL81 117 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 GAGE12IP0CL82 117 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 IGSF10Q6WRI0 2623 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms