RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 GOLT1AQ6ZVE7 132 aa7.74□□□□□ -1.17
PRPF40B-212ENST00000551111 OR4C5Q8NGB2 326 aa7.74□□□□□ -1.17
PRPF40B-212ENST00000551111 ENKURQ8TC29 256 aa7.74□□□□□ -1.17
PRPF40B-212ENST00000551111 FAM30AQ9NZY2 134 aa7.74□□□□□ -1.17
PRPF40B-212ENST00000551111 MBD2Q9UBB5 411 aa7.74□□□□□ -1.17
PRPF40B-212ENST00000551111 LENEPQ9Y5L5 61 aa7.74□□□□□ -1.17
PRPF40B-212ENST00000551111 C17orf112F2Z3M2 114 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 INMT-MINDY4F8WBC2 141 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 M0R2P5 195 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 UPK1BO75841 260 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 MPC2O95563 127 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 IFNA5P01569 189 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 ORM1P02763 201 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 GATA1P15976 413 aaPredicted RBP7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 RAB2AP61019 212 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 Q8N3U1 123 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 TMEM75Q8N9X5 138 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 PCNPQ8WW12 178 aaKnown RBP7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 OTORQ9NRC9 128 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 KCNIP2Q9NS61 270 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 PTTG2Q9NZH5 202 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 NDUFA13Q9P0J0 144 aa7.73□□□□□ -1.17
PRPF40B-212ENST00000551111 IGHV3-73A0A0B4J1V6 119 aa7.72□□□□□ -1.17
PRPF40B-212ENST00000551111 C9JCJ5 164 aa7.72□□□□□ -1.17
PRPF40B-212ENST00000551111 WFDC2Q14508 124 aa7.72□□□□□ -1.17
PRPF40B-212ENST00000551111 KHDC3LQ587J8 217 aa7.72□□□□□ -1.17
PRPF40B-212ENST00000551111 SLC25A29Q8N8R3 303 aa7.72□□□□□ -1.17
PRPF40B-212ENST00000551111 NHLRC2Q8NBF2 726 aa7.72□□□□□ -1.17
PRPF40B-212ENST00000551111 TMED6Q8WW62 240 aa7.72□□□□□ -1.17
PRPF40B-212ENST00000551111 FRZBQ92765 325 aa7.72□□□□□ -1.17
PRPF40B-212ENST00000551111 TXNDC17Q9BRA2 123 aa7.72□□□□□ -1.17
PRPF40B-212ENST00000551111 IGHV3-38A0A0C4DH36 116 aa7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 IGHV3-30P01768 117 aa7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 IGHV3-33P01772 117 aa7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 IGHV3-30-3P0DP02 117 aa7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 IGHV3-30-5P0DP03 117 aa7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 RPL12P30050 165 aaKnown RBP7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 Q6ZSN1 163 aa7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 SCGB1C1Q8TD33 95 aa7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 Q9HAA7 133 aa7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 TREM1Q9NP99 234 aa7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 Q9UF83 564 aa7.71□□□□□ -1.18
PRPF40B-212ENST00000551111 TRAV21A0A0B4J279 112 aa7.7□□□□□ -1.18
PRPF40B-212ENST00000551111 IBA57-AS1B1ANH7 110 aa7.7□□□□□ -1.18
PRPF40B-212ENST00000551111 TAS2R45P59539 299 aa7.7□□□□□ -1.18
PRPF40B-212ENST00000551111 CYCSP99999 105 aaKnown RBP7.7□□□□□ -1.18
PRPF40B-212ENST00000551111 CFAP126Q5VTH2 177 aa7.7□□□□□ -1.18
PRPF40B-212ENST00000551111 CMTM2Q8TAZ6 248 aa7.7□□□□□ -1.18
PRPF40B-212ENST00000551111 S100ZQ8WXG8 99 aa7.7□□□□□ -1.18
PRPF40B-212ENST00000551111 MARVELD1Q9BSK0 173 aa7.7□□□□□ -1.18
PRPF40B-212ENST00000551111 IGLV5-52A0A0A0MRZ9 124 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 PGPEP1LA6NFU8 196 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 K7EP13 123 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 RS1O15537 224 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 IGLV2-11P01706 119 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 ARL14EPLP0DKL9 152 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 PPT1P50897 306 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 TIRAPP58753 221 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 ZNF876PQ49A33 203 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 LINC01556Q5JQF7 62 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 LINC00299Q6ZSB3 139 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 ASB13Q8WXK3 278 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 SDF2L1Q9HCN8 221 aa7.69□□□□□ -1.18
PRPF40B-212ENST00000551111 A0A1W2PPV4 95 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 FBLL1A6NHQ2 334 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 PSCAO43653 123 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 SSNA1O43805 119 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 RNASE3P12724 160 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 ACOT6Q3I5F7 207 aaPredicted RBP7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 OR10J3Q5JRS4 329 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 ZNF506Q5JVG8 444 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 PQLC2Q6ZP29 291 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 C10orf126Q8N4M7 172 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 Q8N814 137 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 OR10G9Q8NGN4 311 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 OR10G7Q8NGN6 311 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 C9orf85Q96MD7 179 aa7.68□□□□□ -1.18
PRPF40B-212ENST00000551111 GCGP01275 180 aa7.67□□□□□ -1.18
PRPF40B-212ENST00000551111 LINC00479Q96M42 142 aa7.67□□□□□ -1.18
PRPF40B-212ENST00000551111 JPT2Q9H910 190 aa7.67□□□□□ -1.18
PRPF40B-212ENST00000551111 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 LECT2O14960 151 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 TCRAP04437 139 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 STAG3L2P0CL84 134 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 STAG3L3P0CL85 134 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 LINC01620Q4KN68 170 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 FAM74A1Q5RGS3 127 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 ARL6IP6Q8N6S5 226 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 RAB24Q969Q5 203 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 KCNS1Q96KK3 526 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 DNAJC30Q96LL9 226 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 TMEM70Q9BUB7 260 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 PSG8Q9UQ74 426 aa7.66□□□□□ -1.18
PRPF40B-212ENST00000551111 TRAV8-6A0A0B4J262 113 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 TRAV34A0A0B4J273 112 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 IGKV3D-20A0A0C4DH25 116 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 TRBV6-4A0A1B0GX49 114 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 GGTLC3B5MD39 225 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 FAM229AH3BQW9 127 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 PFN1P07737 140 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms