RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 NHLRC2Q8NBF2 726 aa15.36■□□□□ 0.05
NEK3-202ENST00000550841 PLAC8L1A1L4L8 177 aa15.35■□□□□ 0.05
NEK3-202ENST00000550841 C9JCJ5 164 aa15.35■□□□□ 0.05
NEK3-202ENST00000550841 CRIP1P50238 77 aa15.35■□□□□ 0.05
NEK3-202ENST00000550841 CEBPGP53567 150 aa15.35■□□□□ 0.05
NEK3-202ENST00000550841 ZNF415Q09FC8 603 aa15.35■□□□□ 0.05
NEK3-202ENST00000550841 DAZ2Q13117 558 aaKnown RBP15.35■□□□□ 0.05
NEK3-202ENST00000550841 PARLQ9H300 379 aa15.35■□□□□ 0.05
NEK3-202ENST00000550841 GSN-AS1Q9NRJ2 163 aa15.35■□□□□ 0.05
NEK3-202ENST00000550841 TP53TG3Q9ULZ0 132 aa15.35■□□□□ 0.05
NEK3-202ENST00000550841 SH2D1AO60880 128 aa15.34■□□□□ 0.05
NEK3-202ENST00000550841 ORM1P02763 201 aa15.34■□□□□ 0.05
NEK3-202ENST00000550841 C11orf72Q8NBR9 251 aa15.34■□□□□ 0.05
NEK3-202ENST00000550841 MUC7Q8TAX7 377 aa15.34■□□□□ 0.05
NEK3-202ENST00000550841 NOP10Q9NPE3 64 aaKnown RBP15.34■□□□□ 0.05
NEK3-202ENST00000550841 STAB2Q8WWQ8 2551 aa15.34■□□□□ 0.05
NEK3-202ENST00000550841 GNRH2O43555 120 aa15.33■□□□□ 0.04
NEK3-202ENST00000550841 MGST1P10620 155 aaKnown RBP15.33■□□□□ 0.04
NEK3-202ENST00000550841 TCL1AP56279 114 aa15.33■□□□□ 0.04
NEK3-202ENST00000550841 DAZAP1Q96EP5 407 aaKnown RBP15.33■□□□□ 0.04
NEK3-202ENST00000550841 SPXQ9BT56 116 aa15.33■□□□□ 0.04
NEK3-202ENST00000550841 NANOS2P60321 138 aaKnown RBP15.32■□□□□ 0.04
NEK3-202ENST00000550841 FAM74A3Q4VXF1 159 aa15.32■□□□□ 0.04
NEK3-202ENST00000550841 C11orf21Q9P2W6 132 aa15.32■□□□□ 0.04
NEK3-202ENST00000550841 CELA1Q9UNI1 258 aa15.32■□□□□ 0.04
NEK3-202ENST00000550841 B4DEV8 164 aa15.31■□□□□ 0.04
NEK3-202ENST00000550841 IGLV2-8P01709 118 aa15.31■□□□□ 0.04
NEK3-202ENST00000550841 TYMSP04818 313 aa15.31■□□□□ 0.04
NEK3-202ENST00000550841 DAD1P61803 113 aa15.31■□□□□ 0.04
NEK3-202ENST00000550841 C12orf74Q32Q52 190 aa15.31■□□□□ 0.04
NEK3-202ENST00000550841 PRR27Q6MZM9 219 aa15.31■□□□□ 0.04
NEK3-202ENST00000550841 SMIM7Q9BQ49 75 aa15.31■□□□□ 0.04
NEK3-202ENST00000550841 LY96Q9Y6Y9 160 aa15.31■□□□□ 0.04
NEK3-202ENST00000550841 TRBV20OR9-2A0A075B6H5 130 aa15.3■□□□□ 0.04
NEK3-202ENST00000550841 IGKV3D-20A0A0C4DH25 116 aa15.3■□□□□ 0.04
NEK3-202ENST00000550841 IGHV3-16A0A0C4DH30 117 aa15.3■□□□□ 0.04
NEK3-202ENST00000550841 ZNF727A8MUV8 499 aa15.3■□□□□ 0.04
NEK3-202ENST00000550841 RYR3Q15413 4870 aa15.3■□□□□ 0.04
NEK3-202ENST00000550841 LINC01559Q495D7 138 aa15.3■□□□□ 0.04
NEK3-202ENST00000550841 MDFICQ9P1T7 246 aa15.3■□□□□ 0.04
NEK3-202ENST00000550841 KRBOX1C9JBD0 128 aa15.29■□□□□ 0.04
NEK3-202ENST00000550841 S100A4P26447 101 aaKnown RBP15.29■□□□□ 0.04
NEK3-202ENST00000550841 SRSF3P84103 164 aaKnown RBP15.29■□□□□ 0.04
NEK3-202ENST00000550841 LGALS9BQ3B8N2 356 aa15.29■□□□□ 0.04
NEK3-202ENST00000550841 OCC1Q8TAD7 63 aa15.29■□□□□ 0.04
NEK3-202ENST00000550841 DEFB130BP0DP73 79 aa15.28■□□□□ 0.04
NEK3-202ENST00000550841 DEFB130AP0DP74 79 aa15.28■□□□□ 0.04
NEK3-202ENST00000550841 ASIPP42127 132 aa15.28■□□□□ 0.04
NEK3-202ENST00000550841 OR5I1Q13606 314 aa15.28■□□□□ 0.04
NEK3-202ENST00000550841 C9JQL5 133 aa15.27■□□□□ 0.04
NEK3-202ENST00000550841 M0R036 132 aa15.27■□□□□ 0.04
NEK3-202ENST00000550841 SPINK4O60575 86 aa15.27■□□□□ 0.04
NEK3-202ENST00000550841 DNLZQ5SXM8 178 aa15.27■□□□□ 0.04
NEK3-202ENST00000550841 TRGV1A0A0A0MS02 117 aa15.26■□□□□ 0.03
NEK3-202ENST00000550841 TRAV10A0A0B4J240 114 aa15.26■□□□□ 0.03
NEK3-202ENST00000550841 PGPEP1LA6NFU8 196 aa15.26■□□□□ 0.03
NEK3-202ENST00000550841 TMEM241Q24JQ0 296 aa15.26■□□□□ 0.03
NEK3-202ENST00000550841 SOHLH1Q5JUK2 328 aa15.26■□□□□ 0.03
NEK3-202ENST00000550841 LINC00612Q8N6U2 182 aa15.26■□□□□ 0.03
NEK3-202ENST00000550841 PHLDA1Q8WV24 401 aaPredicted RBP15.26■□□□□ 0.03
NEK3-202ENST00000550841 C19orf71A6NCJ1 209 aa15.25■□□□□ 0.03
NEK3-202ENST00000550841 M0R2P5 195 aa15.25■□□□□ 0.03
NEK3-202ENST00000550841 CXCL1P09341 107 aa15.25■□□□□ 0.03
NEK3-202ENST00000550841 RPS20P60866 119 aaKnown RBP15.25■□□□□ 0.03
NEK3-202ENST00000550841 Q6ZTC4 211 aa15.25■□□□□ 0.03
NEK3-202ENST00000550841 GAGE12BA1L429 117 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 XKRY2A2RUG3 117 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 NUPR2A6NF83 97 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 GAGE7O76087 117 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 P01737 135 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 GAGE12FP0CL80 117 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 GAGE12GP0CL81 117 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 GAGE12IP0CL82 117 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 CASC10Q5T4H9 136 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 UQCC3Q6UW78 93 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 Q6ZTI0 123 aa15.24■□□□□ 0.03
NEK3-202ENST00000550841 TRGV2A0A075B6R0 118 aa15.23■□□□□ 0.03
NEK3-202ENST00000550841 TMSB15BA0A087X1C1 80 aa15.23■□□□□ 0.03
NEK3-202ENST00000550841 CEMP1Q6PRD7 247 aaPredicted RBP15.23■□□□□ 0.03
NEK3-202ENST00000550841 RASL10AQ92737 203 aa15.23■□□□□ 0.03
NEK3-202ENST00000550841 PTH2Q96A98 100 aa15.23■□□□□ 0.03
NEK3-202ENST00000550841 C9orf85Q96MD7 179 aa15.23■□□□□ 0.03
NEK3-202ENST00000550841 IL36BQ9NZH7 164 aa15.23■□□□□ 0.03
NEK3-202ENST00000550841 KLK5Q9Y337 293 aaPredicted RBP15.23■□□□□ 0.03
NEK3-202ENST00000550841 DEFB131BA0A096LNP1 70 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 GRIFINA4D1Z8 144 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 K7EN84 100 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 ATP5G1P05496 136 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 RNASE3P12724 160 aaKnown RBP15.22■□□□□ 0.03
NEK3-202ENST00000550841 ZFAND6Q6FIF0 208 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 NUDT10Q8NFP7 164 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 OR2D3Q8NGH3 330 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 NUDT11Q96G61 164 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 C18orf15Q96N68 181 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 NDUFAF3Q9BU61 184 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 NAT8Q9UHE5 227 aa15.22■□□□□ 0.03
NEK3-202ENST00000550841 LINC01551Q86U37 167 aa15.21■□□□□ 0.03
NEK3-202ENST00000550841 MRPL16Q9NX20 251 aaKnown RBP15.21■□□□□ 0.03
NEK3-202ENST00000550841 ARMS2P0C7Q2 107 aa15.2■□□□□ 0.02
NEK3-202ENST00000550841 MED14OSP0DP75 135 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms