RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 IGLV2-11P01706 119 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 RBMY1DP0C7P1 496 aaKnown RBP4.18□□□□□ -1.74
SCAF11-213ENST00000550629 FRMD6-AS1P0C7T7 363 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 CT45A10P0DMU9 189 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 ATP5G3P48201 142 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 FLI1Q01543 452 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-213ENST00000550629 PEA15Q15121 130 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 TMEM183BQ1AE95 376 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 GDF5OSQ5U4N7 250 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 COX8CQ7Z4L0 72 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 OR4B1Q8NGF8 309 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 SMIM12Q96EX1 92 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 VGLL1Q99990 258 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 C20orf144Q9BQM9 153 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 NDFIP1Q9BT67 221 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 EIF5A2Q9GZV4 153 aaKnown RBP4.18□□□□□ -1.74
SCAF11-213ENST00000550629 AGPAT4-IT1Q9H0P7 198 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 CSTL1Q9H114 145 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 WFDC10AQ9H1F0 79 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 ZNF492Q9P255 531 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 TP53TG1Q9Y2A0 90 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 ZFP30Q9Y2G7 519 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 SORL1Q92673 2214 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 IGLV5-37A0A075B6J1 123 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 KLLNB2CW77 178 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 INSP01308 110 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 LTAP01374 205 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 ZNF705DP0CH99 300 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-213ENST00000550629 ZNF705BP0CI00 300 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-213ENST00000550629 AKR1C3P42330 323 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 CDKN1BP46527 198 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 TAS2R60P59551 318 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 DEFB1P60022 68 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 UBE2G1P62253 170 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 GNG5P63218 68 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 ERCC8Q13216 396 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 FAM74A3Q4VXF1 159 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 UQCC3Q6UW78 93 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 Q86TA4 180 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 TMEM256Q8N2U0 113 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 EIF4E3Q8N5X7 224 aaKnown RBP4.17□□□□□ -1.74
SCAF11-213ENST00000550629 MRAPQ8TCY5 172 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 IGF2BP2-AS1Q96M15 143 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 RARRES2Q99969 163 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 SLC35B3Q9H1N7 401 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 PSG8Q9UQ74 426 aa4.17□□□□□ -1.74
SCAF11-213ENST00000550629 TRAV8-1A0A0A6YYK1 113 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 LINC00862A6NCI5 91 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 C9JCJ5 164 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 CA1P00915 261 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-213ENST00000550629 IGKV3-20P01619 116 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 PRB2P02812 416 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-213ENST00000550629 GIG44P09565 113 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-213ENST00000550629 RPL35AP18077 110 aaKnown RBP4.16□□□□□ -1.74
SCAF11-213ENST00000550629 RPL35P42766 123 aaKnown RBP4.16□□□□□ -1.74
SCAF11-213ENST00000550629 DEFA6Q01524 100 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 DEFB121Q5J5C9 76 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 TMEM183AQ8IXX5 376 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 ZFAND2AQ8N6M9 145 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 CSNK1G2-AS1Q8NCQ2 148 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 Q8TAT8 98 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 PCNPQ8WW12 178 aaKnown RBP4.16□□□□□ -1.74
SCAF11-213ENST00000550629 LINC00479Q96M42 142 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 B9D2Q9BPU9 175 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 LINC00467Q9BRT7 94 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 RPH3ALQ9UNE2 315 aa4.16□□□□□ -1.74
SCAF11-213ENST00000550629 TRAV34A0A0B4J273 112 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 C7orf71A4D174 169 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 SMIM9A6NGZ8 99 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 H7BYZ3 331 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 M0R2Z0 102 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 CRXO43186 299 aaPredicted RBP4.15□□□□□ -1.75
SCAF11-213ENST00000550629 GPX1P07203 203 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 SRP19P09132 144 aaKnown RBP4.15□□□□□ -1.75
SCAF11-213ENST00000550629 GNG4P50150 75 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 SPINK13Q1W4C9 94 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 SMUG1Q53HV7 270 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 CENPWQ5EE01 88 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 GFI1BQ5VTD9 330 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 Q6AWC8 147 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 ZNF705AQ6ZN79 300 aaPredicted RBP4.15□□□□□ -1.75
SCAF11-213ENST00000550629 PRNTQ86SH4 94 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 BAGE2Q86Y30 109 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 TVP23CQ96ET8 276 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 RCHY1Q96PM5 261 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 ASCL2Q99929 193 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 TM2D3Q9BRN9 247 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 NIPSNAP3BQ9BS92 247 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 TREM1Q9NP99 234 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 BIN3Q9NQY0 253 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 XCL2Q9UBD3 114 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 PAM16Q9Y3D7 125 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 GOLT1BQ9Y3E0 138 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 LY96Q9Y6Y9 160 aa4.15□□□□□ -1.75
SCAF11-213ENST00000550629 TRBV20OR9-2A0A075B6H5 130 aa4.14□□□□□ -1.75
SCAF11-213ENST00000550629 TRAV21A0A0B4J279 112 aa4.14□□□□□ -1.75
SCAF11-213ENST00000550629 ZNF324O75467 553 aaPredicted RBP4.14□□□□□ -1.75
SCAF11-213ENST00000550629 PFN1P07737 140 aaKnown RBP4.14□□□□□ -1.75
SCAF11-213ENST00000550629 RNASE4P34096 147 aaKnown RBP4.14□□□□□ -1.75
SCAF11-213ENST00000550629 TDRG1Q3Y452 100 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms