RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 OR10G8Q8NGN5 311 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 IMMP2LQ96T52 175 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 FAM110AQ9BQ89 295 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 NDFIP1Q9BT67 221 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 AGRNO00468 2067 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 C19orf71A6NCJ1 209 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 FABP5P3A8MUU1 101 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 F6UB75 175 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 H7BYZ3 331 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 ZNF705DP0CH99 300 aaPredicted RBP4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 ZNF705BP0CI00 300 aaPredicted RBP4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 CT45A10P0DMU9 189 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 IGHV4-30-4P0DP06 118 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 PRB4P10163 310 aaPredicted RBP4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 CRIP1P50238 77 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 HIST1H1AQ02539 215 aaPredicted RBP4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 SMUG1Q53HV7 270 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 IBA57Q5T440 356 aaKnown RBP4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 FAM162BQ5T6X4 162 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 TMEM88Q6PEY1 159 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 LINC00322Q6ZN03 302 aaPredicted RBP4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 DAZAP1Q96EP5 407 aaKnown RBP4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 ZC2HC1AQ96GY0 325 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 FAM19A4Q96LR4 140 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 CLUHP3Q96NS8 147 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 ODF3Q96PU9 254 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 RNASE7Q9H1E1 156 aaKnown RBP4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 SAV1Q9H4B6 383 aaPredicted RBP4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 V9GYV3 84 aa4.54□□□□□ -1.68
DEPDC4-209ENST00000550587 FAM231BA6NCW3 169 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 A8MTW9 85 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 ZNF705GA8MUZ8 300 aaPredicted RBP4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 A8MWL6 223 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 A8MZ25 164 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 OR11H12B2RN74 326 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 GATCO43716 136 aaKnown RBP4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 P01737 135 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 PFN1P07737 140 aaKnown RBP4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 CRISP2P16562 243 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 DEFB131AP59861 70 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 DEFB1P60022 68 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 GAGE13Q4V321 117 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 CT83Q5H943 113 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 GDF5OSQ5U4N7 250 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 PRR27Q6MZM9 219 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 CBLN2Q8IUK8 224 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 APRG1Q8IVJ8 170 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 OR4B1Q8NGF8 309 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 Q8TAT8 98 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 TM2D3Q9BRN9 247 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 MAP6D1Q9H9H5 199 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 HYDINQ4G0P3 5121 aa4.53□□□□□ -1.68
DEPDC4-209ENST00000550587 TRBV24-1A0A075B6N3 115 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 TRAV9-1A0A075B6T8 112 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 SMIM27A0A1W2PRY6 76 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 COLCA2A8K830 154 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 KLLNB2CW77 178 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 H3BMM0 161 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 NUDT3O95989 172 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 GPX1P07203 203 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 HLA-DRB4P13762 266 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 S100PP25815 95 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 TSPOP30536 169 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 LEPP41159 167 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 ZNF80P51504 273 aaPredicted RBP4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 ELOBQ15370 118 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 ODF3L2Q3SX64 289 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 KCNIP4Q6PIL6 250 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 AMTNQ6UX39 209 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 ZFAND2AQ8N6M9 145 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 TSKUQ8WUA8 353 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 BTF3L4Q96K17 158 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 YPEL4Q96NS1 127 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 PYGO2Q9BRQ0 406 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 RPP21Q9H633 154 aaKnown RBP4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 IL36BQ9NZH7 164 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 HLA-DRB4X5D2U9 266 aa4.52□□□□□ -1.69
DEPDC4-209ENST00000550587 XKRY2A2RUG3 117 aa4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 TMEM189A5PLL7 270 aa4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 KNCNA6PVL3 124 aa4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 SH2D1AO60880 128 aa4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 RNASE4P34096 147 aaKnown RBP4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 PTTG1IPP53801 180 aa4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 FOXA3P55318 350 aaPredicted RBP4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 FAM3BP58499 235 aaPredicted RBP4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 RPS20P60866 119 aaKnown RBP4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 ACTL10Q5JWF8 245 aa4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 Q6AWC8 147 aa4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 OR2D3Q8NGH3 330 aa4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 GFRA4Q9GZZ7 299 aa4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 URGCP-MRPS24S4R325 110 aa4.51□□□□□ -1.69
DEPDC4-209ENST00000550587 TRAV21A0A0B4J279 112 aa4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 ZNF324O75467 553 aaPredicted RBP4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 IGKV3-20P01619 116 aa4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 ORM1P02763 201 aa4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 CD7P09564 240 aa4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 CDKN1BP46527 198 aa4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 RPL19P84098 196 aaKnown RBP4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 PRR9Q5T870 116 aa4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 STHQ8IWL8 128 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms