RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 TCRAP04437 139 aa13.72□□□□□ -0.21
GCN1-207ENST00000550471 GCHFRP30047 84 aa13.72□□□□□ -0.21
GCN1-207ENST00000550471 Q6ZQT7 251 aa13.72□□□□□ -0.21
GCN1-207ENST00000550471 NFE4Q86UQ8 179 aa13.72□□□□□ -0.21
GCN1-207ENST00000550471 IGHV3-16A0A0C4DH30 117 aa13.71□□□□□ -0.21
GCN1-207ENST00000550471 NXPH4O95158 308 aa13.71□□□□□ -0.21
GCN1-207ENST00000550471 SAPCD1Q5SSQ6 148 aa13.71□□□□□ -0.21
GCN1-207ENST00000550471 LYPD5Q6UWN5 251 aa13.71□□□□□ -0.21
GCN1-207ENST00000550471 OR4C5Q8NGB2 326 aa13.71□□□□□ -0.21
GCN1-207ENST00000550471 NKX6-2Q9C056 277 aaPredicted RBP13.71□□□□□ -0.21
GCN1-207ENST00000550471 PKHD1P08F94 4074 aa13.7□□□□□ -0.22
GCN1-207ENST00000550471 A0A1W2PRE2 83 aa13.7□□□□□ -0.22
GCN1-207ENST00000550471 HMGB3O15347 200 aaKnown RBP13.7□□□□□ -0.22
GCN1-207ENST00000550471 CDK2AP2O75956 126 aa13.7□□□□□ -0.22
GCN1-207ENST00000550471 ZNF575Q86XF7 245 aa13.7□□□□□ -0.22
GCN1-207ENST00000550471 DNAH11Q96DT5 4516 aa13.7□□□□□ -0.22
GCN1-207ENST00000550471 CYB561D1Q8N8Q1 229 aa13.69□□□□□ -0.22
GCN1-207ENST00000550471 TMEM75Q8N9X5 138 aa13.69□□□□□ -0.22
GCN1-207ENST00000550471 ZNF479Q96JC4 524 aa13.69□□□□□ -0.22
GCN1-207ENST00000550471 KRTAP1-5Q9BYS1 174 aa13.69□□□□□ -0.22
GCN1-207ENST00000550471 EPDR1Q9UM22 224 aa13.69□□□□□ -0.22
GCN1-207ENST00000550471 KIAA1109Q2LD37 5005 aa13.69□□□□□ -0.22
GCN1-207ENST00000550471 TRAV8-1A0A0A6YYK1 113 aa13.68□□□□□ -0.22
GCN1-207ENST00000550471 K7EQD1 137 aa13.68□□□□□ -0.22
GCN1-207ENST00000550471 EREGO14944 169 aa13.68□□□□□ -0.22
GCN1-207ENST00000550471 TYMSP04818 313 aa13.68□□□□□ -0.22
GCN1-207ENST00000550471 PFN1P07737 140 aaKnown RBP13.68□□□□□ -0.22
GCN1-207ENST00000550471 PPT1P50897 306 aa13.68□□□□□ -0.22
GCN1-207ENST00000550471 SUMO1P63165 101 aaKnown RBP13.68□□□□□ -0.22
GCN1-207ENST00000550471 SMUG1Q53HV7 270 aa13.68□□□□□ -0.22
GCN1-207ENST00000550471 PTH2Q96A98 100 aa13.68□□□□□ -0.22
GCN1-207ENST00000550471 PSG8Q9UQ74 426 aa13.68□□□□□ -0.22
GCN1-207ENST00000550471 F6UZH7 168 aa13.67□□□□□ -0.22
GCN1-207ENST00000550471 GNRH2O43555 120 aa13.67□□□□□ -0.22
GCN1-207ENST00000550471 EIF3GO75821 320 aaKnown RBP eCLIP13.67□□□□□ -0.22
GCN1-207ENST00000550471 TIRAPP58753 221 aa13.67□□□□□ -0.22
GCN1-207ENST00000550471 GNG5P63218 68 aa13.67□□□□□ -0.22
GCN1-207ENST00000550471 FLI1Q01543 452 aaPredicted RBP13.67□□□□□ -0.22
GCN1-207ENST00000550471 OR2T35Q8NGX2 323 aa13.67□□□□□ -0.22
GCN1-207ENST00000550471 TVP23CQ96ET8 276 aa13.67□□□□□ -0.22
GCN1-207ENST00000550471 KRTAP17-1Q9BYP8 105 aa13.67□□□□□ -0.22
GCN1-207ENST00000550471 LY96Q9Y6Y9 160 aa13.67□□□□□ -0.22
GCN1-207ENST00000550471 PKD1P98161 4303 aa13.67□□□□□ -0.22
GCN1-207ENST00000550471 FXYD6-FXYD2A0A087WZ82 144 aa13.66□□□□□ -0.22
GCN1-207ENST00000550471 CTXND1A0A1B0GTU2 59 aa13.66□□□□□ -0.22
GCN1-207ENST00000550471 SFTA3P0C7M3 94 aa13.66□□□□□ -0.22
GCN1-207ENST00000550471 GYPEP15421 78 aa13.66□□□□□ -0.22
GCN1-207ENST00000550471 LINC00315P59091 139 aa13.66□□□□□ -0.22
GCN1-207ENST00000550471 RGS21Q2M5E4 152 aa13.66□□□□□ -0.22
GCN1-207ENST00000550471 C10orf126Q8N4M7 172 aa13.66□□□□□ -0.22
GCN1-207ENST00000550471 SH3BGRL3Q9H299 93 aa13.66□□□□□ -0.22
GCN1-207ENST00000550471 RNF222A6NCQ9 220 aa13.65□□□□□ -0.22
GCN1-207ENST00000550471 EVI2AP22794 236 aa13.65□□□□□ -0.22
GCN1-207ENST00000550471 PIK3CD-AS1Q5SR53 167 aa13.65□□□□□ -0.22
GCN1-207ENST00000550471 AKR1C8PQ5T2L2 129 aa13.65□□□□□ -0.22
GCN1-207ENST00000550471 GCGP01275 180 aa13.64□□□□□ -0.23
GCN1-207ENST00000550471 RPL7L1Q6DKI1 246 aaKnown RBP13.64□□□□□ -0.23
GCN1-207ENST00000550471 SPATA12Q7Z6I5 190 aa13.64□□□□□ -0.23
GCN1-207ENST00000550471 HIST1H2BAQ96A08 127 aa13.64□□□□□ -0.23
GCN1-207ENST00000550471 TCEAL7Q9BRU2 100 aa13.64□□□□□ -0.23
GCN1-207ENST00000550471 PRADC1Q9BSG0 188 aa13.64□□□□□ -0.23
GCN1-207ENST00000550471 GGTLC3B5MD39 225 aa13.63□□□□□ -0.23
GCN1-207ENST00000550471 ZNF876PQ49A33 203 aa13.63□□□□□ -0.23
GCN1-207ENST00000550471 Q5BKY6 102 aa13.63□□□□□ -0.23
GCN1-207ENST00000550471 TRBV6-4A0A1B0GX49 114 aa13.62□□□□□ -0.23
GCN1-207ENST00000550471 IFNA7P01567 189 aa13.62□□□□□ -0.23
GCN1-207ENST00000550471 IGLV2-11P01706 119 aa13.62□□□□□ -0.23
GCN1-207ENST00000550471 GATA1P15976 413 aaPredicted RBP13.62□□□□□ -0.23
GCN1-207ENST00000550471 ERVFC1-1P60608 527 aa13.62□□□□□ -0.23
GCN1-207ENST00000550471 PRNTQ86SH4 94 aa13.62□□□□□ -0.23
GCN1-207ENST00000550471 PGPEP1Q9NXJ5 209 aa13.62□□□□□ -0.23
GCN1-207ENST00000550471 DYNC1H1Q14204 4646 aaKnown RBP13.62□□□□□ -0.23
GCN1-207ENST00000550471 FABP5P3A8MUU1 101 aa13.61□□□□□ -0.23
GCN1-207ENST00000550471 RS1O15537 224 aa13.61□□□□□ -0.23
GCN1-207ENST00000550471 DNAH10OSP0CZ25 163 aa13.61□□□□□ -0.23
GCN1-207ENST00000550471 RHOHQ15669 191 aa13.61□□□□□ -0.23
GCN1-207ENST00000550471 CDPF1Q6NVV7 123 aa13.61□□□□□ -0.23
GCN1-207ENST00000550471 STOML3Q8TAV4 291 aa13.61□□□□□ -0.23
GCN1-207ENST00000550471 SGK494Q96LW2 274 aa13.61□□□□□ -0.23
GCN1-207ENST00000550471 C9orf85Q96MD7 179 aa13.61□□□□□ -0.23
GCN1-207ENST00000550471 MGST1P10620 155 aaKnown RBP13.6□□□□□ -0.23
GCN1-207ENST00000550471 Q6ZRN7 208 aaPredicted RBP13.6□□□□□ -0.23
GCN1-207ENST00000550471 ZNF80P51504 273 aaPredicted RBP13.59□□□□□ -0.23
GCN1-207ENST00000550471 NHLRC2Q8NBF2 726 aa13.59□□□□□ -0.23
GCN1-207ENST00000550471 MSRB1Q9NZV6 116 aa13.59□□□□□ -0.23
GCN1-207ENST00000550471 ZFP30Q9Y2G7 519 aa13.59□□□□□ -0.23
GCN1-207ENST00000550471 ARL2-SNX15V9GYD0 113 aa13.59□□□□□ -0.23
GCN1-207ENST00000550471 TRAV8-6A0A0B4J262 113 aa13.58□□□□□ -0.24
GCN1-207ENST00000550471 S100A4P26447 101 aaKnown RBP13.58□□□□□ -0.24
GCN1-207ENST00000550471 FHITP49789 147 aa13.58□□□□□ -0.24
GCN1-207ENST00000550471 CFAP126Q5VTH2 177 aa13.58□□□□□ -0.24
GCN1-207ENST00000550471 ZFP2Q6ZN57 461 aa13.58□□□□□ -0.24
GCN1-207ENST00000550471 A8MWV9 139 aa13.57□□□□□ -0.24
GCN1-207ENST00000550471 PEX7O00628 323 aa13.57□□□□□ -0.24
GCN1-207ENST00000550471 FAM74A7A6NL05 159 aa13.56□□□□□ -0.24
GCN1-207ENST00000550471 ARPC5O15511 151 aa13.56□□□□□ -0.24
GCN1-207ENST00000550471 ASIPP42127 132 aa13.56□□□□□ -0.24
GCN1-207ENST00000550471 ZNF345Q14585 488 aa13.56□□□□□ -0.24
GCN1-207ENST00000550471 ZNF726P1Q15940 193 aa13.56□□□□□ -0.24
GCN1-207ENST00000550471 COX8CQ7Z4L0 72 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms