RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 C2orf70A6NJV1 201 aa15.74■□□□□ 0.11
PRDM4-205ENST00000550376 FAM104BQ5XKR9 115 aa15.74■□□□□ 0.11
PRDM4-205ENST00000550376 LINC00173Q6ZV60 143 aa15.74■□□□□ 0.11
PRDM4-205ENST00000550376 C3orf79P0CE67 100 aa15.73■□□□□ 0.11
PRDM4-205ENST00000550376 MRPL51Q4U2R6 128 aaKnown RBP15.73■□□□□ 0.11
PRDM4-205ENST00000550376 ZNF493Q6ZR52 646 aa15.73■□□□□ 0.11
PRDM4-205ENST00000550376 RNF152Q8N8N0 203 aa15.73■□□□□ 0.11
PRDM4-205ENST00000550376 FOXC2Q99958 501 aa15.73■□□□□ 0.11
PRDM4-205ENST00000550376 LINC00614P0C842 121 aa15.72■□□□□ 0.11
PRDM4-205ENST00000550376 H3BVH4 76 aa15.72■□□□□ 0.11
PRDM4-205ENST00000550376 EBLN2Q6P2I7 272 aa15.72■□□□□ 0.11
PRDM4-205ENST00000550376 A0A1B0GW15 77 aa15.71■□□□□ 0.11
PRDM4-205ENST00000550376 FXYD7P58549 80 aa15.71■□□□□ 0.11
PRDM4-205ENST00000550376 KLHL30-AS1Q8NEE0 82 aa15.71■□□□□ 0.11
PRDM4-205ENST00000550376 CD5LO43866 347 aa15.71■□□□□ 0.1
PRDM4-205ENST00000550376 EVI2AP22794 236 aa15.71■□□□□ 0.1
PRDM4-205ENST00000550376 ATOH7Q8N100 152 aa15.71■□□□□ 0.1
PRDM4-205ENST00000550376 Q8N976 141 aa15.71■□□□□ 0.1
PRDM4-205ENST00000550376 IGHV1-24A0A0C4DH33 117 aa15.7■□□□□ 0.1
PRDM4-205ENST00000550376 GNRH2O43555 120 aa15.7■□□□□ 0.1
PRDM4-205ENST00000550376 IFI27P40305 119 aaPredicted RBP15.7■□□□□ 0.1
PRDM4-205ENST00000550376 GATD1Q8NB37 220 aa15.7■□□□□ 0.1
PRDM4-205ENST00000550376 PPP1R14DQ9NXH3 145 aa15.7■□□□□ 0.1
PRDM4-205ENST00000550376 GATA1P15976 413 aaPredicted RBP15.7■□□□□ 0.1
PRDM4-205ENST00000550376 ID1P41134 155 aa15.7■□□□□ 0.1
PRDM4-205ENST00000550376 PKIAP61925 76 aa15.7■□□□□ 0.1
PRDM4-205ENST00000550376 SRSF2Q01130 221 aaKnown RBP15.7■□□□□ 0.1
PRDM4-205ENST00000550376 ANXA2RQ3ZCQ2 193 aa15.69■□□□□ 0.1
PRDM4-205ENST00000550376 DNLZQ5SXM8 178 aa15.69■□□□□ 0.1
PRDM4-205ENST00000550376 DDTP30046 118 aa15.69■□□□□ 0.1
PRDM4-205ENST00000550376 REC114Q7Z4M0 266 aa15.69■□□□□ 0.1
PRDM4-205ENST00000550376 DPF1Q92782 380 aa15.69■□□□□ 0.1
PRDM4-205ENST00000550376 DLX4Q92988 240 aaPredicted RBP15.69■□□□□ 0.1
PRDM4-205ENST00000550376 PRELID3AQ96N28 172 aa15.69■□□□□ 0.1
PRDM4-205ENST00000550376 TRAV12-2A0A075B6T6 113 aa15.68■□□□□ 0.1
PRDM4-205ENST00000550376 CKS2P33552 79 aa15.68■□□□□ 0.1
PRDM4-205ENST00000550376 OR1N2Q8NGR9 330 aa15.68■□□□□ 0.1
PRDM4-205ENST00000550376 RNF185Q96GF1 192 aa15.68■□□□□ 0.1
PRDM4-205ENST00000550376 MCRIP2Q9BUT9 160 aaKnown RBP15.68■□□□□ 0.1
PRDM4-205ENST00000550376 LGALS9O00182 355 aa15.68■□□□□ 0.1
PRDM4-205ENST00000550376 PRSS3P2Q8NHM4 247 aa15.68■□□□□ 0.1
PRDM4-205ENST00000550376 FAM19A4Q96LR4 140 aa15.68■□□□□ 0.1
PRDM4-205ENST00000550376 PAM16Q9Y3D7 125 aa15.68■□□□□ 0.1
PRDM4-205ENST00000550376 LINC01619G3V211 115 aa15.67■□□□□ 0.1
PRDM4-205ENST00000550376 TSTD3H0UI37 97 aa15.67■□□□□ 0.1
PRDM4-205ENST00000550376 SPATA12Q7Z6I5 190 aa15.67■□□□□ 0.1
PRDM4-205ENST00000550376 K7EQG2 157 aa15.67■□□□□ 0.1
PRDM4-205ENST00000550376 NPYP01303 97 aa15.67■□□□□ 0.1
PRDM4-205ENST00000550376 RAB4AP20338 218 aa15.67■□□□□ 0.1
PRDM4-205ENST00000550376 LENEPQ9Y5L5 61 aa15.67■□□□□ 0.1
PRDM4-205ENST00000550376 TRAV26-2A0A0B4J265 109 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 ZNF124Q15973 351 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 ORMDL3Q8N138 153 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 CNFNQ9BYD5 112 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 TRAV12-3A0A0B4J271 114 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 TRAV21A0A0B4J279 112 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 M0R381 172 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 CD28P10747 220 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 SPANXN1Q5VSR9 72 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 TMEM86BQ8N661 226 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 TMEM191AQ9H0A3 160 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 SIGLEC8Q9NYZ4 499 aa15.66■□□□□ 0.1
PRDM4-205ENST00000550376 H0Y8G0 127 aa15.65■□□□□ 0.1
PRDM4-205ENST00000550376 MAJINQ3KP22 176 aa15.65■□□□□ 0.1
PRDM4-205ENST00000550376 SNRPD3P62318 126 aaKnown RBP15.65■□□□□ 0.1
PRDM4-205ENST00000550376 C4orf3Q8WVX3 66 aa15.65■□□□□ 0.1
PRDM4-205ENST00000550376 S100A4P26447 101 aaKnown RBP15.64■□□□□ 0.09
PRDM4-205ENST00000550376 JMJD1CQ15652 2540 aa15.64■□□□□ 0.09
PRDM4-205ENST00000550376 CHCHD1Q96BP2 118 aaKnown RBP15.64■□□□□ 0.09
PRDM4-205ENST00000550376 U3KQK5 164 aa15.64■□□□□ 0.09
PRDM4-205ENST00000550376 OR9G4Q8NGQ1 327 aa15.63■□□□□ 0.09
PRDM4-205ENST00000550376 FLNBO75369 2602 aaKnown RBP15.63■□□□□ 0.09
PRDM4-205ENST00000550376 AP5S1Q9NUS5 200 aa15.63■□□□□ 0.09
PRDM4-205ENST00000550376 TEX43Q6ZNM6 134 aa15.62■□□□□ 0.09
PRDM4-205ENST00000550376 FA2HQ7L5A8 372 aa15.62■□□□□ 0.09
PRDM4-205ENST00000550376 HIVEP1P15822 2718 aa15.62■□□□□ 0.09
PRDM4-205ENST00000550376 A0A0J9YX75 114 aa15.62■□□□□ 0.09
PRDM4-205ENST00000550376 KNCNA6PVL3 124 aa15.62■□□□□ 0.09
PRDM4-205ENST00000550376 LEPROTL1O95214 131 aa15.62■□□□□ 0.09
PRDM4-205ENST00000550376 SPINK13Q1W4C9 94 aa15.62■□□□□ 0.09
PRDM4-205ENST00000550376 TMEM61Q8N0U2 210 aa15.62■□□□□ 0.09
PRDM4-205ENST00000550376 TEX29Q8N6K0 151 aa15.62■□□□□ 0.09
PRDM4-205ENST00000550376 NOTCH3Q9UM47 2321 aa15.61■□□□□ 0.09
PRDM4-205ENST00000550376 LINC01006Q8NI28 216 aa15.61■□□□□ 0.09
PRDM4-205ENST00000550376 RAX2Q96IS3 184 aa15.61■□□□□ 0.09
PRDM4-205ENST00000550376 CITED2Q99967 270 aaPredicted RBP15.61■□□□□ 0.09
PRDM4-205ENST00000550376 FN1P02751 2386 aaKnown RBP15.61■□□□□ 0.09
PRDM4-205ENST00000550376 KLLNB2CW77 178 aa15.6■□□□□ 0.09
PRDM4-205ENST00000550376 OR5AL1P0C617 328 aa15.6■□□□□ 0.09
PRDM4-205ENST00000550376 BTF3P20290 206 aaKnown RBP15.6■□□□□ 0.09
PRDM4-205ENST00000550376 PMCHL2Q9BQD1 86 aa15.59■□□□□ 0.09
PRDM4-205ENST00000550376 VAMP8Q9BV40 100 aa15.59■□□□□ 0.09
PRDM4-205ENST00000550376 SNAI2O43623 268 aa15.59■□□□□ 0.09
PRDM4-205ENST00000550376 ASIPP42127 132 aa15.59■□□□□ 0.09
PRDM4-205ENST00000550376 DEFB131AP59861 70 aa15.59■□□□□ 0.09
PRDM4-205ENST00000550376 DMRTA1Q5VZB9 504 aa15.59■□□□□ 0.09
PRDM4-205ENST00000550376 MUC4Q99102 2169 aa15.58■□□□□ 0.09
PRDM4-205ENST00000550376 RNASE3P12724 160 aaKnown RBP15.58■□□□□ 0.09
PRDM4-205ENST00000550376 APRG1Q8IVJ8 170 aa15.58■□□□□ 0.09
PRDM4-205ENST00000550376 PHLDA3Q9Y5J5 127 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms