RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 SPATA3Q8NHX4 192 aa14.37□□□□□ -0.11
SKP2-208ENST00000546211 CLUHP3Q96NS8 147 aa14.37□□□□□ -0.11
SKP2-208ENST00000546211 A0A1B0GXF2 115 aa14.36□□□□□ -0.11
SKP2-208ENST00000546211 CD7P09564 240 aa14.36□□□□□ -0.11
SKP2-208ENST00000546211 ARMS2P0C7Q2 107 aa14.36□□□□□ -0.11
SKP2-208ENST00000546211 CAMPP49913 170 aa14.36□□□□□ -0.11
SKP2-208ENST00000546211 TMEM136Q6ZRR5 245 aa14.36□□□□□ -0.11
SKP2-208ENST00000546211 ZNF575Q86XF7 245 aa14.36□□□□□ -0.11
SKP2-208ENST00000546211 WFDC9Q8NEX5 89 aa14.36□□□□□ -0.11
SKP2-208ENST00000546211 RBMY1BA6NDE4 496 aaKnown RBP14.35□□□□□ -0.11
SKP2-208ENST00000546211 RBMY1EA6NEQ0 496 aaKnown RBP14.35□□□□□ -0.11
SKP2-208ENST00000546211 HLA-DQA1P01909 254 aa14.35□□□□□ -0.11
SKP2-208ENST00000546211 RBMY1DP0C7P1 496 aaKnown RBP14.35□□□□□ -0.11
SKP2-208ENST00000546211 CTRLP40313 264 aa14.35□□□□□ -0.11
SKP2-208ENST00000546211 FXYD7P58549 80 aa14.35□□□□□ -0.11
SKP2-208ENST00000546211 ANXA2RQ3ZCQ2 193 aa14.35□□□□□ -0.11
SKP2-208ENST00000546211 MUC21Q5SSG8 566 aa14.35□□□□□ -0.11
SKP2-208ENST00000546211 FAM159AQ6UWV7 190 aa14.35□□□□□ -0.11
SKP2-208ENST00000546211 MRPL18Q9H0U6 180 aaKnown RBP14.35□□□□□ -0.11
SKP2-208ENST00000546211 A0A1B0GW15 77 aa14.34□□□□□ -0.11
SKP2-208ENST00000546211 F2Z2F3 143 aa14.34□□□□□ -0.11
SKP2-208ENST00000546211 ZNF324O75467 553 aaPredicted RBP14.34□□□□□ -0.11
SKP2-208ENST00000546211 S100A8P05109 93 aa14.34□□□□□ -0.11
SKP2-208ENST00000546211 KCNS1Q96KK3 526 aa14.34□□□□□ -0.11
SKP2-208ENST00000546211 PHOX2AO14813 284 aa14.34□□□□□ -0.11
SKP2-208ENST00000546211 TRGC1P0CF51 173 aa14.33□□□□□ -0.12
SKP2-208ENST00000546211 ASIPP42127 132 aa14.33□□□□□ -0.12
SKP2-208ENST00000546211 TRPT1Q86TN4 253 aaKnown RBP14.33□□□□□ -0.12
SKP2-208ENST00000546211 S100A4P26447 101 aaKnown RBP14.32□□□□□ -0.12
SKP2-208ENST00000546211 GTSCR1Q86UQ5 136 aa14.32□□□□□ -0.12
SKP2-208ENST00000546211 C19orf73Q9NVV2 129 aa14.32□□□□□ -0.12
SKP2-208ENST00000546211 MAST4O15021 2626 aa14.32□□□□□ -0.12
SKP2-208ENST00000546211 HIST1H2BKO60814 126 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 AMBPP02760 352 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 HIST1H2BJP06899 126 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 HIST1H2BOP23527 126 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 HIST1H2BBP33778 126 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 HIST1H2BDP58876 126 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 NUTF2P61970 127 aaKnown RBP14.31□□□□□ -0.12
SKP2-208ENST00000546211 HIST1H2BCP62807 126 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 HIST2H2BEQ16778 126 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.31□□□□□ -0.12
SKP2-208ENST00000546211 HIST1H2BHQ93079 126 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 HIST1H2BNQ99877 126 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 HIST1H2BMQ99879 126 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 ATRQ13535 2644 aa14.31□□□□□ -0.12
SKP2-208ENST00000546211 MUC21A0A0G2JKD1 596 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 MUC21A0A140T8X8 626 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 CRXO43186 299 aaPredicted RBP14.3□□□□□ -0.12
SKP2-208ENST00000546211 APCSP02743 223 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 S100A6P06703 90 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 IGLL1P15814 213 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 SSTP61278 116 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 TENM1Q9UKZ4 2725 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 IGHV1OR15-1A0A075B7D0 117 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 H3BVH4 76 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 SNAI2O43623 268 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 OR5AL1P0C617 328 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 TDRG1Q3Y452 100 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 SSBP4Q9BWG4 385 aaPredicted RBP14.3□□□□□ -0.12
SKP2-208ENST00000546211 CNFNQ9BYD5 112 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 WFDC10AQ9H1F0 79 aa14.3□□□□□ -0.12
SKP2-208ENST00000546211 SORL1Q92673 2214 aa14.29□□□□□ -0.12
SKP2-208ENST00000546211 AGRNO00468 2067 aa14.29□□□□□ -0.12
SKP2-208ENST00000546211 GNRH2O43555 120 aa14.29□□□□□ -0.12
SKP2-208ENST00000546211 INSP01308 110 aa14.29□□□□□ -0.12
SKP2-208ENST00000546211 MED14OSP0DP75 135 aa14.29□□□□□ -0.12
SKP2-208ENST00000546211 TWIST1Q15672 202 aa14.29□□□□□ -0.12
SKP2-208ENST00000546211 DNLZQ5SXM8 178 aa14.29□□□□□ -0.12
SKP2-208ENST00000546211 C20orf144Q9BQM9 153 aa14.29□□□□□ -0.12
SKP2-208ENST00000546211 NTF3P20783 257 aa14.28□□□□□ -0.12
SKP2-208ENST00000546211 CACNG7P62955 275 aa14.28□□□□□ -0.12
SKP2-208ENST00000546211 TIMM8BQ9Y5J9 83 aaPredicted RBP14.28□□□□□ -0.12
SKP2-208ENST00000546211 SLAQ13239 276 aa14.27□□□□□ -0.12
SKP2-208ENST00000546211 SPANXN1Q5VSR9 72 aa14.27□□□□□ -0.12
SKP2-208ENST00000546211 GATD1Q8NB37 220 aa14.27□□□□□ -0.12
SKP2-208ENST00000546211 WIPF1O43516 503 aa14.26□□□□□ -0.13
SKP2-208ENST00000546211 RBMY1A1P0DJD3 496 aaKnown RBP14.26□□□□□ -0.13
SKP2-208ENST00000546211 RBMY1CP0DJD4 496 aa14.26□□□□□ -0.13
SKP2-208ENST00000546211 RBMY1FQ15415 496 aaKnown RBP14.26□□□□□ -0.13
SKP2-208ENST00000546211 OR10AG1Q8NH19 301 aa14.26□□□□□ -0.13
SKP2-208ENST00000546211 NDUFA6P56556 154 aa14.26□□□□□ -0.13
SKP2-208ENST00000546211 KIAA1644Q3SXP7 199 aa14.26□□□□□ -0.13
SKP2-208ENST00000546211 ZNF493Q6ZR52 646 aa14.26□□□□□ -0.13
SKP2-208ENST00000546211 DEFB125Q8N687 156 aa14.26□□□□□ -0.13
SKP2-208ENST00000546211 XCL2Q9UBD3 114 aa14.26□□□□□ -0.13
SKP2-208ENST00000546211 PHLDA3Q9Y5J5 127 aa14.26□□□□□ -0.13
SKP2-208ENST00000546211 TRGV11A0A075B6L2 103 aa14.25□□□□□ -0.13
SKP2-208ENST00000546211 RNASE3P12724 160 aaKnown RBP14.25□□□□□ -0.13
SKP2-208ENST00000546211 Q8N1Y9 231 aa14.25□□□□□ -0.13
SKP2-208ENST00000546211 IGHV4-4A0A075B6R2 117 aa14.24□□□□□ -0.13
SKP2-208ENST00000546211 CBY3A6NI87 242 aa14.24□□□□□ -0.13
SKP2-208ENST00000546211 RPL35AP18077 110 aaKnown RBP14.24□□□□□ -0.13
SKP2-208ENST00000546211 MORN3Q6PF18 240 aaPredicted RBP14.24□□□□□ -0.13
SKP2-208ENST00000546211 SCRT2Q9NQ03 307 aa14.24□□□□□ -0.13
SKP2-208ENST00000546211 TP53TG3Q9ULZ0 132 aa14.24□□□□□ -0.13
SKP2-208ENST00000546211 FBN1P35555 2871 aaKnown RBP14.24□□□□□ -0.13
SKP2-208ENST00000546211 IGHV3-16A0A0C4DH30 117 aa14.23□□□□□ -0.13
SKP2-208ENST00000546211 PRR31Q5SQ13 230 aa14.23□□□□□ -0.13
SKP2-208ENST00000546211 SMIM15Q7Z3B0 74 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms