RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 OR4C5Q8NGB2 326 aa17.78■□□□□ 0.44
FOXA1-202ENST00000545425 OR2K2Q8NGT1 345 aa17.78■□□□□ 0.44
FOXA1-202ENST00000545425 MSRB1Q9NZV6 116 aa17.78■□□□□ 0.44
FOXA1-202ENST00000545425 HLA-DRB4X5D2U9 266 aa17.78■□□□□ 0.44
FOXA1-202ENST00000545425 TRGV3P03979 118 aa17.77■□□□□ 0.44
FOXA1-202ENST00000545425 PRB4P10163 310 aaPredicted RBP17.77■□□□□ 0.44
FOXA1-202ENST00000545425 IGHV7-4-1A0A0J9YVY3 117 aa17.77■□□□□ 0.43
FOXA1-202ENST00000545425 LINC01548A6NM66 108 aa17.77■□□□□ 0.43
FOXA1-202ENST00000545425 K7EMI3 77 aa17.77■□□□□ 0.43
FOXA1-202ENST00000545425 LEPP41159 167 aa17.77■□□□□ 0.43
FOXA1-202ENST00000545425 SAMD13Q5VXD3 122 aa17.77■□□□□ 0.43
FOXA1-202ENST00000545425 IGHV4-39P01824 125 aa17.76■□□□□ 0.43
FOXA1-202ENST00000545425 ZNF580Q9UK33 172 aa17.76■□□□□ 0.43
FOXA1-202ENST00000545425 F8P00451 2351 aa17.75■□□□□ 0.43
FOXA1-202ENST00000545425 IGLV2-18A0A075B6J9 118 aa17.75■□□□□ 0.43
FOXA1-202ENST00000545425 OR10J6PQ8NGY7 276 aa17.75■□□□□ 0.43
FOXA1-202ENST00000545425 IGHV3-66A0A0C4DH42 116 aa17.74■□□□□ 0.43
FOXA1-202ENST00000545425 IGHG2P01859 326 aa17.74■□□□□ 0.43
FOXA1-202ENST00000545425 HIGD1BQ9P298 99 aa17.74■□□□□ 0.43
FOXA1-202ENST00000545425 C11orf21Q9P2W6 132 aa17.74■□□□□ 0.43
FOXA1-202ENST00000545425 HIVEP1P15822 2718 aa17.74■□□□□ 0.43
FOXA1-202ENST00000545425 AKAP9Q99996 3911 aa17.74■□□□□ 0.43
FOXA1-202ENST00000545425 TRAV21A0A0B4J279 112 aa17.73■□□□□ 0.43
FOXA1-202ENST00000545425 H3BRM9 83 aa17.73■□□□□ 0.43
FOXA1-202ENST00000545425 EVI2AP22794 236 aa17.73■□□□□ 0.43
FOXA1-202ENST00000545425 CCL19Q99731 98 aa17.73■□□□□ 0.43
FOXA1-202ENST00000545425 ODF1Q14990 250 aa17.72■□□□□ 0.43
FOXA1-202ENST00000545425 SPANXN1Q5VSR9 72 aa17.72■□□□□ 0.43
FOXA1-202ENST00000545425 A0A0G2JLM5 398 aa17.72■□□□□ 0.43
FOXA1-202ENST00000545425 LAGE3Q14657 143 aa17.72■□□□□ 0.43
FOXA1-202ENST00000545425 LRRC75A-AS1Q8N1F1 130 aa17.72■□□□□ 0.43
FOXA1-202ENST00000545425 TP73-AS1Q9UF72 201 aa17.72■□□□□ 0.43
FOXA1-202ENST00000545425 CELSR1Q9NYQ6 3014 aa17.71■□□□□ 0.43
FOXA1-202ENST00000545425 NRACQ8N912 160 aa17.71■□□□□ 0.43
FOXA1-202ENST00000545425 C10orf105Q8TEF2 133 aa17.71■□□□□ 0.43
FOXA1-202ENST00000545425 ITPR3Q14573 2671 aa17.71■□□□□ 0.42
FOXA1-202ENST00000545425 PRRC2AP48634 2157 aaKnown RBP17.7■□□□□ 0.42
FOXA1-202ENST00000545425 C7orf71A4D174 169 aa17.7■□□□□ 0.42
FOXA1-202ENST00000545425 A6NDX4 124 aa17.7■□□□□ 0.42
FOXA1-202ENST00000545425 SOCS3O14543 225 aa17.7■□□□□ 0.42
FOXA1-202ENST00000545425 PPP1R17O96001 155 aa17.7■□□□□ 0.42
FOXA1-202ENST00000545425 Q6ZVH6 145 aa17.7■□□□□ 0.42
FOXA1-202ENST00000545425 TMEM219Q86XT9 240 aa17.7■□□□□ 0.42
FOXA1-202ENST00000545425 APRG1Q8IVJ8 170 aa17.7■□□□□ 0.42
FOXA1-202ENST00000545425 MYOZ3Q8TDC0 251 aa17.7■□□□□ 0.42
FOXA1-202ENST00000545425 TEP1Q99973 2627 aaKnown RBP17.7■□□□□ 0.42
FOXA1-202ENST00000545425 DPM2O94777 84 aa17.7■□□□□ 0.42
FOXA1-202ENST00000545425 IGKCP01834 107 aa17.7■□□□□ 0.42
FOXA1-202ENST00000545425 PPIFP30405 207 aaKnown RBP17.7■□□□□ 0.42
FOXA1-202ENST00000545425 ZNF207O43670 478 aaKnown RBP17.69■□□□□ 0.42
FOXA1-202ENST00000545425 PRSS1P07477 247 aa17.69■□□□□ 0.42
FOXA1-202ENST00000545425 SLC25A16P16260 332 aa17.69■□□□□ 0.42
FOXA1-202ENST00000545425 ADAMTSL5Q6ZMM2 481 aa17.69■□□□□ 0.42
FOXA1-202ENST00000545425 TMEM158Q8WZ71 300 aa17.69■□□□□ 0.42
FOXA1-202ENST00000545425 C20orf78Q9BR46 151 aa17.69■□□□□ 0.42
FOXA1-202ENST00000545425 IGHV3OR16-13A0A075B7E8 117 aa17.68■□□□□ 0.42
FOXA1-202ENST00000545425 IGHV3-74A0A0B4J1X5 117 aa17.68■□□□□ 0.42
FOXA1-202ENST00000545425 TRAV40A0A0B4J280 105 aa17.68■□□□□ 0.42
FOXA1-202ENST00000545425 M0R381 172 aa17.68■□□□□ 0.42
FOXA1-202ENST00000545425 CLEC2AQ6UVW9 174 aa17.68■□□□□ 0.42
FOXA1-202ENST00000545425 AP1S3Q96PC3 154 aa17.68■□□□□ 0.42
FOXA1-202ENST00000545425 DKK2Q9UBU2 259 aa17.68■□□□□ 0.42
FOXA1-202ENST00000545425 MAP1AP78559 2803 aaPredicted RBP17.67■□□□□ 0.42
FOXA1-202ENST00000545425 SMIM17P0DL12 118 aa17.67■□□□□ 0.42
FOXA1-202ENST00000545425 FOXE3Q13461 319 aa17.67■□□□□ 0.42
FOXA1-202ENST00000545425 ORMDL2Q53FV1 153 aa17.67■□□□□ 0.42
FOXA1-202ENST00000545425 FAM19A4Q96LR4 140 aa17.67■□□□□ 0.42
FOXA1-202ENST00000545425 IGHV3-49A0A0A0MS15 119 aa17.66■□□□□ 0.42
FOXA1-202ENST00000545425 C9orf118A6NHY6 69 aa17.66■□□□□ 0.42
FOXA1-202ENST00000545425 ASIPP42127 132 aa17.66■□□□□ 0.42
FOXA1-202ENST00000545425 GTF2H5Q6ZYL4 71 aa17.66■□□□□ 0.42
FOXA1-202ENST00000545425 ZFAND2AQ8N6M9 145 aa17.66■□□□□ 0.42
FOXA1-202ENST00000545425 CBY3A6NI87 242 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 LINC01549A6NIU2 74 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 K7EMT4 169 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 HHLA3Q9XRX5 114 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 UFC1Q9Y3C8 167 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 TRAV12-1A0A0B4J245 112 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 IGHV4-61A0A0C4DH41 118 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 GATA3P23771 443 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 FXYD7P58549 80 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 WFDC11Q8NEX6 87 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 C20orf173Q96LM9 149 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 C18orf15Q96N68 181 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 DPH3P1Q9H4G8 78 aa17.65■□□□□ 0.42
FOXA1-202ENST00000545425 PLNP26678 52 aa17.64■□□□□ 0.41
FOXA1-202ENST00000545425 NMUP48645 174 aa17.64■□□□□ 0.41
FOXA1-202ENST00000545425 AMMECR1LQ6DCA0 310 aa17.64■□□□□ 0.41
FOXA1-202ENST00000545425 GPHB5Q86YW7 130 aa17.64■□□□□ 0.41
FOXA1-202ENST00000545425 SMIM2Q9BVW6 85 aa17.64■□□□□ 0.41
FOXA1-202ENST00000545425 WNK2Q9Y3S1 2297 aa17.64■□□□□ 0.41
FOXA1-202ENST00000545425 IGLV1-40P01703 118 aa17.63■□□□□ 0.41
FOXA1-202ENST00000545425 DSCR9P59020 149 aa17.63■□□□□ 0.41
FOXA1-202ENST00000545425 H3BVH4 76 aa17.63■□□□□ 0.41
FOXA1-202ENST00000545425 GAS8-AS1O95177 125 aa17.63■□□□□ 0.41
FOXA1-202ENST00000545425 Q5PR19 223 aa17.63■□□□□ 0.41
FOXA1-202ENST00000545425 KRTAP1-3Q8IUG1 177 aa17.63■□□□□ 0.41
FOXA1-202ENST00000545425 A0A087WX48 190 aa17.62■□□□□ 0.41
FOXA1-202ENST00000545425 TMEM89A2RUT3 159 aa17.61■□□□□ 0.41
FOXA1-202ENST00000545425 MSMBP08118 114 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms