RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 Q8N7P7 452 aa6.87□□□□□ -1.31
VPS13D-212ENST00000543766 IMUPQ9GZP8 106 aa6.87□□□□□ -1.31
VPS13D-212ENST00000543766 LY96Q9Y6Y9 160 aa6.87□□□□□ -1.31
VPS13D-212ENST00000543766 LRP4O75096 1905 aa6.87□□□□□ -1.31
VPS13D-212ENST00000543766 IGHV3OR15-7A0A075B7D8 119 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 DEFA4P12838 97 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 POM121L12Q8N7R1 296 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.86□□□□□ -1.31
VPS13D-212ENST00000543766 A0A1W2PQD3 144 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 LINC01356Q8N9X3 169 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 V9GYV3 84 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 SHANK1Q9Y566 2161 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 ADARB2-AS1A8MUL3 147 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 C10orf142B7Z368 130 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 WISP2O76076 250 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 RHOHQ15669 191 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 PDPNQ86YL7 162 aa6.86□□□□□ -1.31
VPS13D-212ENST00000543766 IGHV5-10-1A0A0J9YXX1 117 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 SCO2A0A1W2PP80 73 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 C12orf77C9JDV5 145 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 NDUFB3O43676 98 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 SH2D1AO60880 128 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 IAPPP10997 89 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 IFI27P40305 119 aaPredicted RBP6.85□□□□□ -1.31
VPS13D-212ENST00000543766 LAGE3Q14657 143 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 PRR15Q8IV56 129 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 GVINP1Q7Z2Y8 2422 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 TRBV19A0A075B6N1 114 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 TRAV8-3A0A0A6YYJ7 113 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 WT1P19544 449 aaPredicted RBP6.85□□□□□ -1.31
VPS13D-212ENST00000543766 RPS21P63220 83 aaKnown RBP6.85□□□□□ -1.31
VPS13D-212ENST00000543766 ZNF818PQ6ZRF7 136 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 Q6ZS52 159 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 SORL1Q92673 2214 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 IGKV3D-7A0A0C4DH55 119 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 TRBV7-6A0A0J9YX20 115 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 PMS2P5A8MQ11 134 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 C17orf51A8MQB3 221 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 CLEC19AQ6UXS0 136 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 Q6ZRM9 215 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 Q6ZRU5 148 aa6.85□□□□□ -1.31
VPS13D-212ENST00000543766 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
VPS13D-212ENST00000543766 RPS18P62269 152 aaKnown RBP6.84□□□□□ -1.31
VPS13D-212ENST00000543766 FHL2Q14192 279 aa6.84□□□□□ -1.31
VPS13D-212ENST00000543766 FGFBP3Q8TAT2 258 aa6.84□□□□□ -1.31
VPS13D-212ENST00000543766 LINC01619G3V211 115 aa6.84□□□□□ -1.31
VPS13D-212ENST00000543766 PLA2G2CQ5R387 149 aa6.84□□□□□ -1.31
VPS13D-212ENST00000543766 SPATA3Q8NHX4 192 aa6.84□□□□□ -1.31
VPS13D-212ENST00000543766 IGHV1-58A0A0C4DH39 117 aa6.84□□□□□ -1.31
VPS13D-212ENST00000543766 COX5AP20674 150 aa6.84□□□□□ -1.31
VPS13D-212ENST00000543766 PIFOQ8TCI5 191 aa6.84□□□□□ -1.31
VPS13D-212ENST00000543766 TXNDC17Q9BRA2 123 aa6.84□□□□□ -1.31
VPS13D-212ENST00000543766 TRGV5A0A0B4J1U4 118 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 C15orf62A8K5M9 175 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 A8MUN3 132 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 C9JCJ5 164 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 TREML4Q6UXN2 200 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 C11orf52Q96A22 123 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 URB1-AS1Q96HZ7 61 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 C16orf95Q9H693 158 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 CEP250Q9BV73 2442 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 RP1P56715 2156 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 CRIP2P52943 208 aaPredicted RBP6.83□□□□□ -1.32
VPS13D-212ENST00000543766 SPANXN5Q5MJ07 72 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 IGFL3Q6UXB1 125 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 LINC00643Q86TS7 51 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 TRGV9Q99603 122 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 FGF22Q9HCT0 170 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 NCOR2Q9Y618 2525 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 M0R378 163 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 IGKV1-39P01597 117 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 IGHG2P01859 326 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 IGKV1D-39P04432 117 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 SDIM1Q6ZPB5 146 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 Q6ZR03 302 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 C11orf53Q8IXP5 236 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 PRR25Q96S07 402 aa6.83□□□□□ -1.32
VPS13D-212ENST00000543766 SLC25A29Q8N8R3 303 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 SMRP1Q8NCR6 262 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 IGKV1D-13A0A0B4J2D9 117 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 COX7A2LO14548 114 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 PRYO14603 147 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 IGKV1-13P0DP09 117 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 FAM104BQ5XKR9 115 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 FOXL2NBQ6ZUU3 175 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 ZNF355PQ9NSJ1 428 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 PSENENQ9NZ42 101 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 TNCP24821 2201 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 PSPHP1O15172 72 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 PRSS2P07478 247 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 FANCD2OSQ96PS1 177 aa6.82□□□□□ -1.32
VPS13D-212ENST00000543766 IGKV1-27A0A075B6S5 117 aa6.81□□□□□ -1.32
VPS13D-212ENST00000543766 S100A4P26447 101 aaKnown RBP6.81□□□□□ -1.32
VPS13D-212ENST00000543766 HLA-DMBP28068 263 aa6.81□□□□□ -1.32
VPS13D-212ENST00000543766 GUSBP11Q6P575 273 aa6.81□□□□□ -1.32
VPS13D-212ENST00000543766 COX8CQ7Z4L0 72 aa6.81□□□□□ -1.32
VPS13D-212ENST00000543766 SLC25A45Q8N413 288 aa6.81□□□□□ -1.32
VPS13D-212ENST00000543766 ZFHX4Q86UP3 3567 aa6.81□□□□□ -1.32
VPS13D-212ENST00000543766 ABCA4P78363 2273 aa6.81□□□□□ -1.32
VPS13D-212ENST00000543766 WI2-2373I1.2A0A1W2PRP0 233 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms