RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ANXA2RQ3ZCQ2 193 aa8.65□□□□□ -1.02
DDB1-223ENST00000543658 ZNF705AQ6ZN79 300 aaPredicted RBP8.65□□□□□ -1.02
DDB1-223ENST00000543658 C1orf158Q8N1D5 194 aa8.65□□□□□ -1.02
DDB1-223ENST00000543658 CSNK1G2-AS1Q8NCQ2 148 aa8.65□□□□□ -1.02
DDB1-223ENST00000543658 OR11H2Q8NH07 326 aa8.65□□□□□ -1.02
DDB1-223ENST00000543658 ISOC2Q96AB3 205 aa8.65□□□□□ -1.02
DDB1-223ENST00000543658 RNASE7Q9H1E1 156 aaKnown RBP8.65□□□□□ -1.02
DDB1-223ENST00000543658 NBEAL1Q6ZS30 2694 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 TMSB15BA0A087X1C1 80 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 SMIM9A6NGZ8 99 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 PPP1R2P9O14990 202 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 APOC3P02656 99 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 CRIP1P50238 77 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 ZNF415Q09FC8 603 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 LINC01559Q495D7 138 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 FAM231DQ6ZW35 169 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 OR2D3Q8NGH3 330 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 OR10G8Q8NGN5 311 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 C16orf74Q96GX8 76 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 SFRP2Q96HF1 295 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 NEU1Q99519 415 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 RPP21Q9H633 154 aaKnown RBP8.64□□□□□ -1.03
DDB1-223ENST00000543658 RETNQ9HD89 108 aa8.64□□□□□ -1.03
DDB1-223ENST00000543658 CARHSP1Q9Y2V2 147 aaKnown RBP8.64□□□□□ -1.03
DDB1-223ENST00000543658 C19orf71A6NCJ1 209 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 SNURFLB1AK76 121 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 MT-ND4LP03901 98 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 MIFP14174 115 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 ASIPP42127 132 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 Q6ZQT7 251 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 SVBPQ8N300 66 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 NUDT10Q8NFP7 164 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
DDB1-223ENST00000543658 NUDT11Q96G61 164 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 LINC00467Q9BRT7 94 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 OSTCQ9NRP0 149 aa8.63□□□□□ -1.03
DDB1-223ENST00000543658 SNAPINO95295 136 aa8.62□□□□□ -1.03
DDB1-223ENST00000543658 TYMSP04818 313 aa8.62□□□□□ -1.03
DDB1-223ENST00000543658 RPL19P84098 196 aaKnown RBP8.62□□□□□ -1.03
DDB1-223ENST00000543658 TDRG1Q3Y452 100 aa8.62□□□□□ -1.03
DDB1-223ENST00000543658 C10orf91Q5T1B1 145 aa8.62□□□□□ -1.03
DDB1-223ENST00000543658 ZNF493Q6ZR52 646 aa8.62□□□□□ -1.03
DDB1-223ENST00000543658 ANAPC16Q96DE5 110 aa8.62□□□□□ -1.03
DDB1-223ENST00000543658 TM2D3Q9BRN9 247 aa8.62□□□□□ -1.03
DDB1-223ENST00000543658 OVOL2Q9BRP0 275 aa8.62□□□□□ -1.03
DDB1-223ENST00000543658 IGKV3D-20A0A0C4DH25 116 aa8.61□□□□□ -1.03
DDB1-223ENST00000543658 GRIFINA4D1Z8 144 aa8.61□□□□□ -1.03
DDB1-223ENST00000543658 A8MWL6 223 aa8.61□□□□□ -1.03
DDB1-223ENST00000543658 CXCL1P09341 107 aa8.61□□□□□ -1.03
DDB1-223ENST00000543658 NHLRC4P0CG21 123 aaPredicted RBP8.61□□□□□ -1.03
DDB1-223ENST00000543658 CT83Q5H943 113 aa8.61□□□□□ -1.03
DDB1-223ENST00000543658 C11orf21Q9P2W6 132 aa8.61□□□□□ -1.03
DDB1-223ENST00000543658 TIMM8BQ9Y5J9 83 aaPredicted RBP8.61□□□□□ -1.03
DDB1-223ENST00000543658 X6R8D5 127 aa8.61□□□□□ -1.03
DDB1-223ENST00000543658 GNRH2O43555 120 aa8.6□□□□□ -1.03
DDB1-223ENST00000543658 ATP6V1G1O75348 118 aa8.6□□□□□ -1.03
DDB1-223ENST00000543658 RHEBQ15382 184 aa8.6□□□□□ -1.03
DDB1-223ENST00000543658 RNF212Q495C1 297 aa8.6□□□□□ -1.03
DDB1-223ENST00000543658 CLRN3Q8NCR9 226 aa8.6□□□□□ -1.03
DDB1-223ENST00000543658 BORCS7Q96B45 105 aa8.6□□□□□ -1.03
DDB1-223ENST00000543658 TPPP3Q9BW30 176 aa8.6□□□□□ -1.03
DDB1-223ENST00000543658 TP53TG3Q9ULZ0 132 aa8.6□□□□□ -1.03
DDB1-223ENST00000543658 IGHV4-28A0A0C4DH34 117 aa8.59□□□□□ -1.03
DDB1-223ENST00000543658 H3BVH4 76 aa8.59□□□□□ -1.03
DDB1-223ENST00000543658 EMP1P54849 157 aa8.59□□□□□ -1.03
DDB1-223ENST00000543658 RNASE8Q8TDE3 154 aaKnown RBP8.59□□□□□ -1.03
DDB1-223ENST00000543658 RPS10P5Q9NQ39 176 aa8.59□□□□□ -1.03
DDB1-223ENST00000543658 IGHV3-16A0A0C4DH30 117 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 TEX48A0A1B0GUV7 120 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 A0A1W2PPQ1 181 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 PRM2P04554 102 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 MED14OSP0DP75 135 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 GZMBP10144 247 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 AZU1P20160 251 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 TCL1AP56279 114 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 FER1L6-AS1Q8NA97 138 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 SYT8Q8NBV8 401 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 TSKUQ8WUA8 353 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 SPXQ9BT56 116 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 CTDSP1Q9GZU7 261 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 GSN-AS1Q9NRJ2 163 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 IL36BQ9NZH7 164 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 PHLDA3Q9Y5J5 127 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 V9GYV3 84 aa8.58□□□□□ -1.04
DDB1-223ENST00000543658 ARMS2P0C7Q2 107 aa8.57□□□□□ -1.04
DDB1-223ENST00000543658 S100A1P23297 94 aa8.57□□□□□ -1.04
DDB1-223ENST00000543658 DNLZQ5SXM8 178 aa8.57□□□□□ -1.04
DDB1-223ENST00000543658 SPANXN1Q5VSR9 72 aa8.57□□□□□ -1.04
DDB1-223ENST00000543658 Q8NAQ8 132 aa8.57□□□□□ -1.04
DDB1-223ENST00000543658 GFRA4Q9GZZ7 299 aa8.57□□□□□ -1.04
DDB1-223ENST00000543658 C11orf68Q9H3H3 251 aaKnown RBP8.57□□□□□ -1.04
DDB1-223ENST00000543658 MDFICQ9P1T7 246 aa8.57□□□□□ -1.04
DDB1-223ENST00000543658 C7orf77A4D0Y5 90 aa8.56□□□□□ -1.04
DDB1-223ENST00000543658 M0R2P5 195 aa8.56□□□□□ -1.04
DDB1-223ENST00000543658 DEFB4AO15263 64 aa8.56□□□□□ -1.04
DDB1-223ENST00000543658 S100PP25815 95 aa8.56□□□□□ -1.04
DDB1-223ENST00000543658 KCNIP4Q6PIL6 250 aa8.56□□□□□ -1.04
DDB1-223ENST00000543658 ZFP82Q8N141 532 aa8.56□□□□□ -1.04
DDB1-223ENST00000543658 C11orf72Q8NBR9 251 aa8.56□□□□□ -1.04
DDB1-223ENST00000543658 NOP10Q9NPE3 64 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms